Diff for /imach/src/ChangeLog between versions 1.44 and 1.66

version 1.44, 2021/02/20 15:45:47 version 1.66, 2023/05/08 18:48:01
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 2021-02-20  Nicolas Brouard   <brouard@ined.fr>  2023-05-08  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): Fix bug on quitting after result lines!          *  (Module): Error V0 when result:. and model 1+age+V1: fixed
         (Module): Version 0.99r21  
   2023-04-29  Nicolas Brouard  <brouard@ined.fr>
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>  
           * imach.c (Module): Inverting the model equation and fixingg bugs
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error          in the drawings
           "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
   
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>  2023-04-24  Nicolas Brouard  <brouard@ined.fr>
   
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.          * imach.c (Module): some bugs in printinggnuplot 
   
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
   
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy          * imach.c (Module): Version 0.99r42 needed a newer version of
         and life table from the data without any state)          Gnuplot. But newer version 0.99r43 should run with the Gnuplot
           version 5.0 or 5.1 distributed with IMaCh.
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-18  Nicolas Brouard   <brouard@ined.fr>
         * version.h: Summary: version 0.99.r19  
           * imach.c (Module): Fixing when a state in the data is 0 or higher
         * imach.c: Summary: Projection syntax simplified          than lstate+ndeath. Fixing the plot of contribution to Likelihood.
         We can now start projections, forward or backward, from the mean date  
         of inteviews up to or down to a number of years of projection:  2022-09-16  Nicolas Brouard   <brouard@ined.fr>
         prevforecast=1 yearsfproj=15.3 mobil_average=0  
         or          * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0  
         or  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
         prevbackcast=1 yearsbproj=12.3 mobil_average=1  
         or          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Version 0.99r39 with colored dummy covariates
         * imach.c: Summary: doxygen tex bug          (fixed or time varying), using new last columns of
           ILK_parameter.txt file.
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-11  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: There was some wrong lines added  
           * imach.c (Module): Adding timevarying products of any kinds,
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>          should work before shifting cotvar from ncovcol+nqv columns in
           order to have a correspondance between the column of cotvar and
         * Makefile, imach.c: *** empty log message ***          the id of column.
           (Module): Some cleaning and adding covariates in ILK.txt
         * ChangeLog: Summary: C=  
   2022-09-09  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some updates  
           * imach.c (Module): Many improvements for fixing products of fixed
         * imach.c: Summary: Before ncovmax          timevarying as well as fixed * fixed, and test with quantitative
           covariate.
         * version.h: *** empty log message ***  
   2022-09-04  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: 0.99r18 unlimited number of individuals  
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.          * imach.c (Module): Now the easy runs i.e. without result or
           model=1+age only did not work. The defautl combination should be 1
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>          and not 0 because everything hasn't been tranformed yet.
   
         * imach.c: Summary: Bug for young ages (<-30) will be in r17  2022-09-02  Nicolas Brouard   <brouard@ined.fr>
   
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Version 0.99r35 because it outputs same results with
           1+age+V1+V1*age for females and 1+age for females only
         * Makefile: Summary: 0.99r16          (education=1 noweight)
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2022-08-31  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed          * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17          * imach.c (Module): Version 0.99r33 A lot of changes in
           reassigning covariates: my first idea was that people will always
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          use the first covariate V1 into the model but in fact they are
           producing data with many covariates and can use an equation model
         * imach.c: Summary: Some bugs fixed          with some of the covariate; it means that in a model V2+V3 instead
           of codtabm(k,Tvaraff[j]) which calculates for combination k, for
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>          three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
           the equation model is restricted to two variables only (V2, V3)
         * imach.c:          and the combination for V2 should be codtabm(k,1) instead of
         Summary: Bug fixed by providing frequencies only for non missing covariates          (codtabm(k,2), and the code should be
           codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>          made. All of these should be simplified once a day like we did in
           hpxij() for example by using precov[nres] which is computed in
         * imach.c: Summary: some minor bugs          decoderesult for each nres of each resultline. Loop should be done
           on the equation model globally by distinguishing only product with
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>          age (which are changing with age) and no more on type of
           covariates, single dummies, single covariates. 
         * README.txt: *** empty log message ***  
   2022-08-06  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some bugs fixed, valgrind tested  
           *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>  
   2022-08-03  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  
           *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
         * imach.c:  
         Summary: Computing mean and stdeviation of fixed quantitative variables  2022-07-25  Brouard Nicolas  <brouard@brouard.name>
   
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Error cptcovn instead of nsd in bmij (was
           coredumped, revealed by Feiuno, thank you.
         * imach.c: Summary: Some minor bugs fixed  
   2022-07-23  Nicolas Brouard   <brouard@ined.fr>
         * version.h: *** empty log message ***  
           * r29 W and not sqrt(Wald)
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>  
   2022-07-22  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
         * imach.c: Summary: Adding second argument for quitting  
   2022-06-02  Brouard Nicolas  <brouard@brouard.name>
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Adding the Wald tests from the log to the main
         * Makefile, README.txt, imach.c: Summary: 0.99r15          htm for better display of the maximum likelihood estimators.
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c  
   2022-05-30  Brouard Nicolas  <brouard@brouard.name>
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: With products of covariates (age or dummies or
         * imach.c: Summary: temporary working          quantitatives), estimates of parameters were good but when
           estimating variances the positions of newly created covariates
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>          were wrongly assigned and results were wrong. Thank to Feinua_Sun!
   
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)  2022-05-24  Nicolas Brouard   <brouard@ined.fr>
   
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Some attempts to find a bug of wrong estimates
           of confidencce intervals with product in the equation modelC
         * imach.c: Summary: BOM files can be read now  
   2022-05-15  Nicolas Brouard   <brouard@ined.fr>
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module):  Some minor improvements
         * imach.c: Summary: Graphs improvements  
   2022-04-13  Brouard Nicolas  <brouard@brouard.name>
         * imach.c: Summary: Saito's color  
           * imach.c (Module): Adding link to text data files
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>  
   2022-04-11  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Version 0.99r14  
           * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>  
   2022-04-05  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: More documentation on projections  
           * imach.c (Module): Fixed covariates (dummy or quantitative)
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
         * imach.c: Summary: Some bug with rint          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>  
   2022-03-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * 99r25 Improvements in fixing discrepancies between covariates
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>          missing in result line but in model. 
   
         * imach.c: Summary: Code into subroutine, cleanings  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  
         Summary: backprojection and confidence intervals of backprevalence          * ./ (Module): Fixed bug on result:
   
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>  *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: temporary save for backprojection          * imach.c (Module): Fix bug on quitting after result lines!
           (Module): Version 0.99r21
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)  
   2021-02-12  Nicolas Brouard   <brouard@ined.fr>
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): The use of a Windows BOM (huge) file is now an error
         * imach.c: Summary: imach 0.99r13 Some bugs fixed  
   
         * imach.c: Summary: Labels in graphs  2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
   
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>          *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
   
         * imach.c: Summary: to save  2020-02-22  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>          *  (Module): imach.c Update mle=-3 (for computing Life expectancy
           and life table from the data without any state)
         * imach.c: *** empty log message ***  
   2019-05-20  Brouard Nicolas  <brouard@ined.fr>
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: Summary: version 0.99.r19
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1  
           * imach.c: Summary: Projection syntax simplified
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>          We can now start projections, forward or backward, from the mean date
           of inteviews up to or down to a number of years of projection:
         * imach.c: Summary: Gnuplot indexations fixed (humm)          prevforecast=1 yearsfproj=15.3 mobil_average=0
           or
         * imach.c:          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3          or
           prevbackcast=1 yearsbproj=12.3 mobil_average=1
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>          or
           prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
         * imach.c: Summary: Version 0.99r12  
         Some cleanings, conformed with updated documentation.  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: doxygen tex bug
   
         * version.h: *** empty log message ***  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
         * version.h: Summary:0.99r11          * imach.c: Summary: There was some wrong lines added
   
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>  2019-05-09  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Temp          * Makefile, imach.c: *** empty log message ***
   
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>          * ChangeLog: Summary: C=
   
         * imach.c: Summary: Temporary          * imach.c: Summary: Some updates
   
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Before ncovmax
   
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed          * version.h: *** empty log message ***
   
         * imach.c: Summary: Fixing data parameter line          * imach.c: Summary: 0.99r18 unlimited number of individuals
           The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>  
   2018-12-13  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.99 in progress  
           * imach.c: Summary: Bug for young ages (<-30) will be in r17
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>  
   2018-12-05  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * Makefile: Summary: 0.99r16
         * imach.c: Summary: not working  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some bugs fixed
         * imach.c: Summary: continue  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:  Summary: Bug for young ages (<-30) will be in r17
         * imach.c: Summary: Starting values from frequencies  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Some bugs fixed
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>  
   2018-05-01  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c:
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>          Summary: Bug fixed by providing frequencies only for non missing covariates
   
         * imach.c: Summary: Fixing a lots  2018-04-27  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: some minor bugs
   
         * imach.c: Summary: gnuplot problem in Back projection to fix  2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Better          * README.txt: *** empty log message ***
   
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bugs fixed, valgrind tested
   
         * imach.c:  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
         Summary: Improvement in Powell output in order to copy and paste  
           * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
         * imach.c: Summary: Starting tests of 0.99  
           * imach.c:
         * imach.c: Summary: to valgrind          Summary: Computing mean and stdeviation of fixed quantitative variables
   
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>  2018-04-19  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Some minor bugs fixed
   
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>          * version.h: *** empty log message ***
   
         * imach.c: *** empty log message ***  2018-02-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * imach.c: *** empty log message ***
   
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Adding second argument for quitting
   
         * imach.c: Summary: not working  2018-02-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Not working          * Makefile, README.txt, imach.c: Summary: 0.99r15
           New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>  
   2017-07-20  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Completing for func too  
           * imach.c: Summary: temporary working
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>  
   2017-07-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixing some arrays, still debugging  
           * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>  
   2017-07-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods          * imach.c: Summary: BOM files can be read now
   
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>  2017-06-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temp          * imach.c: Summary: Graphs improvements
   
         * imach.c: Summary: saving but not running          * imach.c: Summary: Saito's color
   
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  2017-06-29  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixes          * imach.c: Summary: Version 0.99r14
   
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  2017-06-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7          * imach.c: Summary: More documentation on projections
   
         * setup.iss, Makefile, version.h: *** empty log message ***          * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
   
         * imach.c: Summary: temporary          * imach.c: Summary: Some bug with rint
   
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  2017-05-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6          * imach.c: *** empty log message ***
   
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  2017-05-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: minor bug          * imach.c: Summary: Code into subroutine, cleanings
   
         * imach.c: Summary: 0.99r2  2017-05-18  Brouard Nicolas  <brouard@ined.fr>
   
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>          * imach.c:
           Summary: backprojection and confidence intervals of backprevalence
         * imach.c: *** empty log message ***  
   2017-05-13  Brouard Nicolas  <brouard@ined.fr>
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: temporary save for backprojection
         * imach.c: Summary: 0.99 Back projections  
           * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-26  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Experimental backcast  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Labels in graphs
         * imach.c: Summary: 0.98r4 Warning and status=-2  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
         Version 0.98r4 is now:  
          - displaying an error when status is -1, date of interview unknown and date of death known;          * imach.c: Summary: to save
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.  2017-04-18  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: *** empty log message ***
   
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>  2017-04-05  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
   
         * imach.c: Summary: 0.98r4 working  2017-04-04  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: Summary: linuxrpm added          * imach.c: Summary: Gnuplot indexations fixed (humm)
   
         * Makefile: *** empty log message ***          * imach.c:
           Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
         * imach.c: Summary: temporary not working  
   2017-04-03  Brouard Nicolas  <brouard@ined.fr>
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Version 0.99r12
         * imach.c: Summary: 0.98r4          Some cleanings, conformed with updated documentation.
   
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>  2017-03-30  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * version.h: *** empty log message ***
   
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>          * version.h: Summary:0.99r11
   
         * Makefile:  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  
           * imach.c: Summary: Temp
         * imach.c: Summary: minor typo  
   2017-03-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
           * imach.c: Summary: Temporary
         Author: Nicolas Brouard  
   2017-03-08  Brouard Nicolas  <brouard@ined.fr>
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
         * imach.c: Summary: Start working on projected prevalences  
           * imach.c: Summary: Fixing data parameter line
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>  
   2016-12-15  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Adding ftolpl parameter  
         Author: N Brouard          * imach.c: Summary: 0.99 in progress
   
         We had difficulties to get smoothed confidence intervals. It was due  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
         to the period prevalence which wasn't computed accurately. The inner  
         parameter ftolpl is now an outer parameter of the .imach parameter          * imach.c: *** empty log message ***
         file after estepm. If ftolpl is small 1.e-4 and estepm too,  
         computation are long.          * imach.c: Summary: not working
   
         * version.h: *** empty log message ***  2016-09-08  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temporary          * imach.c: Summary: continue
   
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>  2016-09-07  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Starting values from frequencies
   
         * setup.iss.in: Summary: some new subdirs          * imach.c: *** empty log message ***
   
         * imach.c: *** empty log message ***  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in:          * imach.c: *** empty log message ***
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  
   2016-08-30  Brouard Nicolas  <brouard@ined.fr>
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Fixing a lots
         * imach.c: *** empty log message ***  
   2016-08-29  Brouard Nicolas  <brouard@ined.fr>
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: gnuplot problem in Back projection to fix
         * imach.c:  
         Summary: 0.98r3 some clarification for graphs on likelihood contributions          * imach.c: Summary: Better
   
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>  2016-08-26  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Some new graphs of contribution to likelihood          * imach.c:
           Summary: Improvement in Powell output in order to copy and paste
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Starting tests of 0.99
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake          * imach.c: Summary: to valgrind
   
         * imach.c: Summary: looking at better estimation of the hessian  2016-08-25  Brouard Nicolas  <brouard@ined.fr>
   
         Also a better criteria for convergence to the period prevalence And          * imach.c: *** empty log message ***
         therefore adding the number of years needed to converge. (The  
         prevalence in any alive state shold sum to one  2016-08-23  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: *** empty log message ***
   
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: not working
   
         * imach.c:  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
         Summary: Adding some overall graph on contribution to likelihood. Might change  
           * imach.c: Summary: not working
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Not working
         * Makefile: *** empty log message ***  
   2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r0  
           * imach.c: Summary: Completing for func too
         - Some new graphs like suvival functions  
         - Some bugs fixed like model=1+age+V2.  2016-07-22  Brouard Nicolas  <brouard@ined.fr>
   
         * ChangeLog, Makefile: Summary: 0.98r0          * imach.c: Summary: Fixing some arrays, still debugging
   
         * CMakeLists.txt: Summary: Some tests for setup.iss  2016-07-21  Brouard Nicolas  <brouard@ined.fr>
   
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>          * imach.c:
           Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  
   2016-07-12  Brouard Nicolas  <brouard@ined.fr>
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  
           * imach.c: Summary: temp
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.  
           * imach.c: Summary: saving but not running
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
   2016-07-01  Brouard Nicolas  <brouard@ined.fr>
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  
           * imach.c: Summary: Fixes
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>  
   2016-02-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Merging 1.61 to 1.162  
           * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  
           * setup.iss, Makefile, version.h: *** empty log message ***
         * prevlim.h (Module):  
           * imach.c: Summary: temporary
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>  
   2016-02-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...  
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.          * imach.c: Summary: Probably last 0.98 stable version 0.98r6
   
 2010-04-29  brouard  <brouard@ined.fr>  2016-02-16  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Checking covariates for more complex models          * imach.c: Summary: minor bug
         than V1+V2. A lot of change to be done. Unstable.  
           * imach.c: Summary: 0.99r2
 2010-04-26  brouard  <brouard@ined.fr>  
   2016-02-15  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): merging some libgsl code. Fixing computation  
         of likelione (using inter/intrapolation if mle = 0) in order to          * imach.c: *** empty log message ***
         get same likelihood as if mle=1.  
         Some cleaning of code and comments added.  2016-02-12  Brouard Nicolas  <brouard@ined.fr>
   
 2009-10-29  brouard  <brouard@ined.fr>          * imach.c: Summary: 0.99 Back projections
   
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  2015-12-23  Brouard Nicolas  <brouard@ined.fr>
   
 2006-06-30  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: Experimental backcast
   
         * imach.c (Module): Clarifications on computing e.j  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
   
 2006-04-28  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: 0.98r4 Warning and status=-2
   
         * imach.c (Module): Yes the sum of survivors was wrong since          Version 0.98r4 is now:
         imach-114 because nhstepm was no more computed in the age           - displaying an error when status is -1, date of interview unknown and date of death known;
         loop. Now we define nhstepma in the age loop.           - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         (Module): In order to speed up (in case of numerous covariates) we          Older changes concerning s=-2, dating from 2005 have been supersed.
         compute health expectancies (without variances) in a first step  
         and then all the health expectancies with variances or standard          * Makefile: *** empty log message ***
         deviation (needs data from the Hessian matrices) which slows the  
         computation.  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
         In the future we should be able to stop the program is only health  
         expectancies and graph are needed without standard deviations.          * Makefile: *** empty log message ***
   
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: 0.98r4 working
   
         * imach.iss (Module):          * Makefile: Summary: linuxrpm added
   
         * imach.c (Module): bugs in evsi + population file added in htm output file          * Makefile: *** empty log message ***
   
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: temporary not working
   
         * imach.c (Module):  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-20  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: 0.98r4
   
         * imach.c (Module): <title> changed, corresponds to .htm file  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
         name. <head> headers where missing.  
           * Makefile: *** empty log message ***
         * Makefile (Module): 0.98g  
   2015-11-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Weights can have a decimal point as for  
         English (a comma might work with a correct LC_NUMERIC environment,          * Makefile:
         otherwise the weight is truncated).          Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         Modification of warning when the covariates values are not 0 or  
         1.          * imach.c: Summary: minor typo
         Version 0.98g  
           * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           Author: Nicolas Brouard
         * imach.c (Module): Comments concerning covariates added  
   2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         * noreg-setup.iss (Module): Version 0.98f  
           * imach.c: Summary: Start working on projected prevalences
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup  
   2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): refinements in the computation of lli if  
         status=-2 in order to have more reliable computation if stepm is          * imach.c: Summary: Adding ftolpl parameter
         not 1 month. Version 0.98f          Author: N Brouard
   
 2006-03-15  Brouard Nicolas  <brouard@localhost>          We had difficulties to get smoothed confidence intervals. It was due
           to the period prevalence which wasn't computed accurately. The inner
         * imach.c (Module): Bug if status = -2, the loglikelihood was          parameter ftolpl is now an outer parameter of the .imach parameter
         computed as likelihood omitting the logarithm. Version O.98e          file after estepm. If ftolpl is small 1.e-4 and estepm too,
           computation are long.
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
           * version.h: *** empty log message ***
         * imach.c (Module): varevsij Comments added explaining the second  
         table of variances if popbased=1 .          * imach.c: Summary: temporary
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  
         (Module): Function pstamp added  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
         (Module): Version 0.98d  
           * Makefile: *** empty log message ***
 2006-03-06  Brouard Nicolas  <brouard@localhost>  
           * setup.iss.in: Summary: some new subdirs
         * imach.c (Module): Variance-covariance wrong links and  
         varian-covariance of ej. is needed (Saito).          * imach.c: *** empty log message ***
   
 2006-02-27  Brouard Nicolas  <brouard@localhost>          * setup.iss.in:
           Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         * imach.c (Module): One freematrix added in mlikeli!  
   2015-10-24  Brouard Nicolas  <brouard@ined.fr>
 2006-02-26  Brouard Nicolas  <brouard@localhost>  
           * imach.c: *** empty log message ***
         * imach.c (Module): Some improvements in processing parameter  
         filename with strsep.  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-24  Brouard Nicolas  <brouard@localhost>          * imach.c:
           Summary: 0.98r3 some clarification for graphs on likelihood contributions
         * imach.c (Module): Memory leaks checks with valgrind and:  
         datafile was not closed, some imatrix were not freed and on matrix  2015-10-01  Brouard Nicolas  <brouard@ined.fr>
         allocation too.  
           * imach.c: Summary: Some new graphs of contribution to likelihood
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
   2015-09-30  Brouard Nicolas  <brouard@ined.fr>
         * strsep.c (Module): Inclusion because not in mingw32!!!  
           * Makefile:
         * setup.iss.in (Module): IMACHSETUPVERSION added          Summary: Version read from version.h, itself read with cmake
   
         * noreg-setup.iss (Module): added to cvs tree          * imach.c: Summary: looking at better estimation of the hessian
   
         * Makefile (Module): IMACHSETUPVERSION added          Also a better criteria for convergence to the period prevalence And
           therefore adding the number of years needed to converge. (The
 2006-01-30  BROUARD Nicolas  <brouard@localhost>          prevalence in any alive state shold sum to one
   
         * Makefile (Module, Module): Latest Makefile          * Makefile: *** empty log message ***
   
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe  2015-09-22  Brouard Nicolas  <brouard@ined.fr>
   
 2006-01-27  BROUARD Nicolas  <brouard@localhost>          * imach.c:
           Summary: Adding some overall graph on contribution to likelihood. Might change
         * noreg-setup.iss (Module): ADDED  
   2015-09-15  Brouard Nicolas  <brouard@ined.fr>
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  
           * Makefile: *** empty log message ***
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.  
           * imach.c: Summary: 0.98r0
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  
           - Some new graphs like survival functions
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          - Some bugs fixed like model=1+age+V2.
   
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X          * ChangeLog, Makefile: Summary: 0.98r0
   
 2005-09-30    <lievre@PC_00595>          * CMakeLists.txt: Summary: Some tests for setup.iss
   
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         (Module): If the status is missing at the last wave but we know  
         that the person is alive, then we can code his/her status as -2          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
         (instead of missing=-1 in earlier versions) and his/her  
         contributions to the likelihood is 1 - Prob of dying from last  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  
         the healthy state at last known wave). Version is 0.98          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
   
 2004-05-20  Brouard Nicolas  <brouard@localhost>  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * imach.c (Repository):          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
         Agnes added a direct estimation of mortality (without the need of  
         computing period prevalence and differential mortality). Thus here  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
         is version 0.97a which has been distributed to some people at  
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of          * imach.c (Module): Merging 1.61 to 1.162
         mortality using covariates is not done today. Estimating direct  
         mortality is a very different process because it doesn't need  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         interpolation because it is easy to get the lx from the force of  
         the mortality mux in the simplest case as for a Gompertz (log mux          * prevlim.h (Module): 
         = a + b*x . But we have been able to incorporate the new code  
         within former imach program (0.96d) without deteriorating too much  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
         the understanding of the program.  
           * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
 2003-06-25    <brouard@BROUARD>          (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
   
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  2010-04-29  brouard  <brouard@ined.fr>
         exist so I changed back to asctime which exists.  
         (Module): Version 0.96b          * imach.c (Module): Checking covariates for more complex models
           than V1+V2. A lot of change to be done. Unstable.
 2003-06-24    <brouard@BROUARD>  
   2010-04-26  brouard  <brouard@ined.fr>
         * imach.c (Module): Some bugs corrected for windows. Also, when  
         mle=-1 a template is output in file "or"mypar.txt with the design          * imach.c (Module): merging some libgsl code. Fixing computation
         of the covariance matrix to be input.          of likelione (using inter/intrapolation if mle = 0) in order to
           get same likelihood as if mle=1.
 2003-06-25  Brouard Nicolas  <brouard@homebrou>          Some cleaning of code and comments added.
   
         * imach.c (Repository): Duplicated warning errors corrected.  2009-10-29  brouard  <brouard@ined.fr>
         (Repository): Elapsed time after each iteration is now output. It  
         helps to forecast when convergence will be reached. Elapsed time          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
         is stamped in powell.  We created a new html file for the graphs  
         concerning matrix of covariance. It has extension -cov.htm.  2006-06-30  Brouard Nicolas  <brouard@localhost>
   
 2003-06-23  Brouard Nicolas  <brouard@homebrou>          * imach.c (Module): Clarifications on computing e.j
   
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  2006-04-28  Brouard Nicolas  <brouard@localhost>
   
 2003-06-18  Brouard Nicolas  <brouard@homebrou>          * imach.c (Module): Yes the sum of survivors was wrong since
           imach-114 because nhstepm was no more computed in the age
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96          loop. Now we define nhstepma in the age loop.
           (Module): In order to speed up (in case of numerous covariates) we
 2003-06-17  Brouard Nicolas  <brouard@homebrou>          compute health expectancies (without variances) in a first step
           and then all the health expectancies with variances or standard
           deviation (needs data from the Hessian matrices) which slows the
         * imach.c (Repository): Check when date of death was earlier that          computation.
         current date of interview. It may happen when the death was just          In the future we should be able to stop the program is only health
         prior to the death. In this case, dh was negative and likelihood          expectancies and graph are needed without standard deviations.
         was wrong (infinity). We still send an "Error" but patch by  
         assuming that the date of death was just one stepm after the  2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         interview.  
         (Repository): Because some people have very long ID (first column)          * imach.iss (Module): 
         we changed int to long in num[] and we added a new lvector for  
         memory allocation. But we also truncated to 8 characters (left          * imach.c (Module): bugs in evsi + population file added in htm output file
         truncation)  
   2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         (Repository): No more line truncation errors.  
           * imach.c (Module): 
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  
   2006-03-20  Brouard Nicolas  <brouard@localhost>
         * imach.c (Repository): Add of a routine likelione (likelihood  
         only once) which prints on a text file          * imach.c (Module): <title> changed, corresponds to .htm file
         (ilk) the contributions to the likelihood for each          name. <head> headers where missing.
         individual/wave.  
           * Makefile (Module): 0.98g
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  
         * imach.c (Repository): Replace "freqsummary" at a correct          * imach.c (Module): Weights can have a decimal point as for
         place. It differs from routine "prevalence" which may be called          English (a comma might work with a correct LC_NUMERIC environment,
         many times. Probs is memory consuming and must be used with          otherwise the weight is truncated).
         parcimony.          Modification of warning when the covariates values are not 0 or
           1. 
 2003-06-17    <brouard@BROUARD>          Version 0.98g
   
         * timeval.h (Module): Added included file to make use of  2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         gettimeofday working on win32 with cygwin.  
           * imach.c (Module): Comments concerning covariates added
 2003-05-16  Brouard Nicolas  <brouard@brouard>  
         * imach.c (Module): Insert of a warning if the delay between two          * noreg-setup.iss (Module): Version 0.98f
         waves is negative.  
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
         * imach.c (Module):  
           * imach.c (Module): refinements in the computation of lli if
 2003-05-03    <brouard@BROUARD>          status=-2 in order to have more reliable computation if stepm is
           not 1 month. Version 0.98f
         * imach.c: Some cleaning  
   2006-03-15  Brouard Nicolas  <brouard@localhost>
 2003-03-28    <brouard@BROUARD>  
         * imach.c (Module): In version up to 0.92 likelihood was computed          * imach.c (Module): Bug if status = -2, the loglikelihood was
         as if date of death was unknown. Death was treated as any other          computed as likelihood omitting the logarithm. Version O.98e
         health state: the date of the interview describes the actual state  
         and not the date of a change in health state. The former idea was  2006-03-14  Brouard Nicolas  <brouard@localhost>
         to consider that at each interview the state was recorded  
         (healthy, disable or death) and IMaCh was corrected; but when we          * imach.c (Module): varevsij Comments added explaining the second
         introduced the exact date of death then we should have modified          table of variances if popbased=1 .
         the contribution of an exact death to the likelihood. This new          (Module): Covariances of eij, ekl added, graphs fixed, new html link.
         contribution is smaller and very dependent of the step unit          (Module): Function pstamp added
         stepm. It is no more the probability to die between last interview          (Module): Version 0.98d 
         and month of death but the probability to survive from last  
         interview up to one month before death multiplied by the  2006-03-06  Brouard Nicolas  <brouard@localhost>
         probability to die within a month. Thanks to Chris  
         Jackson for correcting this bug.  Former versions increased          * imach.c (Module): Variance-covariance wrong links and
         mortality artificially. The bad side is that we add another loop          varian-covariance of ej. is needed (Saito).
   
   2006-02-27  Brouard Nicolas  <brouard@localhost>
         which slows down the processing. The difference can be up to 10%  
           * imach.c (Module): One freematrix added in mlikeli!
   
         lower mortality.  2006-02-26  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
   
   2006-02-24  Brouard Nicolas  <brouard@localhost>
 2002-05-30    <brouard@BROUARD>  
           * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
   
   2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         *  
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
   
           * noreg-setup.iss (Module): added to cvs tree
         * imach.c (Module): Add correlation matrix of one-step  
           * Makefile (Module): IMACHSETUPVERSION added
   
         probabilities and covariance matrix  2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

Removed from v.1.44  
changed lines
  Added in v.1.66


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