Diff for /imach/src/ChangeLog between versions 1.47 and 1.65

version 1.47, 2022/03/17 08:58:13 version 1.65, 2023/05/08 17:46:42
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 2022-03-17  Brouard Nicolas  <brouard@ined.fr  >  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
   
         * 99r25 Improvements in fixing discrepancies between covariates          * imach.c (Module): Inverting the model equation and fixingg bugs
         missing in result line but in model.          in the drawings
           "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
 *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>  
         * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett  2023-04-24  Nicolas Brouard  <brouard@ined.fr>
   
 *2021-03-08  Nicolas Brouard   <brouard@ined.fr>          * imach.c (Module): some bugs in printinggnuplot 
   
         * ./ (Module): Fixed bug on result:  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
   
 *2021-02-20  Nicolas Brouard   <brouard@ined.fr>          * imach.c (Module): Version 0.99r42 needed a newer version of
           Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         * imach.c (Module): Fix bug on quitting after result lines!          version 5.0 or 5.1 distributed with IMaCh.
         (Module): Version 0.99r21  
   2022-09-18  Nicolas Brouard   <brouard@ined.fr>
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>  
           * imach.c (Module): Fixing when a state in the data is 0 or higher
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error          than lstate+ndeath. Fixing the plot of contribution to Likelihood.
   
   2022-09-16  Nicolas Brouard   <brouard@ined.fr>
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>  
           * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy  
         and life table from the data without any state)  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Version 0.99r39 with colored dummy covariates
           (fixed or time varying), using new last columns of
         * version.h: Summary: version 0.99.r19          ILK_parameter.txt file.
   
         * imach.c: Summary: Projection syntax simplified  2022-09-11  Nicolas Brouard   <brouard@ined.fr>
         We can now start projections, forward or backward, from the mean date  
         of inteviews up to or down to a number of years of projection:          * imach.c (Module): Adding timevarying products of any kinds,
         prevforecast=1 yearsfproj=15.3 mobil_average=0          should work before shifting cotvar from ncovcol+nqv columns in
         or          order to have a correspondance between the column of cotvar and
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0          the id of column.
         or          (Module): Some cleaning and adding covariates in ILK.txt
         prevbackcast=1 yearsbproj=12.3 mobil_average=1  
         or  2022-09-09  Nicolas Brouard   <brouard@ined.fr>
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1  
           * imach.c (Module): Many improvements for fixing products of fixed
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>          timevarying as well as fixed * fixed, and test with quantitative
           covariate.
         * imach.c: Summary: doxygen tex bug  
   2022-09-04  Nicolas Brouard   <brouard@ined.fr>
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Now the easy runs i.e. without result or
         * imach.c: Summary: There was some wrong lines added          model=1+age only did not work. The defautl combination should be 1
           and not 0 because everything hasn't been tranformed yet.
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-02  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, imach.c: *** empty log message ***  
           * imach.c: Version 0.99r35 because it outputs same results with
         * ChangeLog: Summary: C=          1+age+V1+V1*age for females and 1+age for females only
           (education=1 noweight)
         * imach.c: Summary: Some updates  
   2022-08-31  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Before ncovmax  
           * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
         * version.h: *** empty log message ***  
   2022-08-21  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: 0.99r18 unlimited number of individuals  
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.          * imach.c (Module): Version 0.99r33 A lot of changes in
           reassigning covariates: my first idea was that people will always
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>          use the first covariate V1 into the model but in fact they are
           producing data with many covariates and can use an equation model
         * imach.c: Summary: Bug for young ages (<-30) will be in r17          with some of the covariate; it means that in a model V2+V3 instead
           of codtabm(k,Tvaraff[j]) which calculates for combination k, for
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>          three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
           the equation model is restricted to two variables only (V2, V3)
         * Makefile: Summary: 0.99r16          and the combination for V2 should be codtabm(k,1) instead of
           (codtabm(k,2), and the code should be
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
           made. All of these should be simplified once a day like we did in
         * imach.c: Summary: Some bugs fixed          hpxij() for example by using precov[nres] which is computed in
           decoderesult for each nres of each resultline. Loop should be done
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          on the equation model globally by distinguishing only product with
           age (which are changing with age) and no more on type of
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17          covariates, single dummies, single covariates. 
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2022-08-06  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed          *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
   
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>  2022-08-03  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:          *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
         Summary: Bug fixed by providing frequencies only for non missing covariates  
   2022-07-25  Brouard Nicolas  <brouard@brouard.name>
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Error cptcovn instead of nsd in bmij (was
         * imach.c: Summary: some minor bugs          coredumped, revealed by Feiuno, thank you.
   
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
   
         * README.txt: *** empty log message ***          * r29 W and not sqrt(Wald)
   
         * imach.c: Summary: Some bugs fixed, valgrind tested  2022-07-22  Nicolas Brouard   <brouard@ined.fr>
   
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
   
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  2022-06-02  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c:          * imach.c (Module): Adding the Wald tests from the log to the main
         Summary: Computing mean and stdeviation of fixed quantitative variables          htm for better display of the maximum likelihood estimators.
   
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>  2022-05-30  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: Some minor bugs fixed          * imach.c: With products of covariates (age or dummies or
           quantitatives), estimates of parameters were good but when
         * version.h: *** empty log message ***          estimating variances the positions of newly created covariates
           were wrongly assigned and results were wrong. Thank to Feinua_Sun!
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>  
   2022-05-24  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c (Module): Some attempts to find a bug of wrong estimates
         * imach.c: Summary: Adding second argument for quitting          of confidencce intervals with product in the equation modelC
   
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  2022-05-15  Nicolas Brouard   <brouard@ined.fr>
   
         * Makefile, README.txt, imach.c: Summary: 0.99r15          * imach.c (Module):  Some minor improvements
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c  
   2022-04-13  Brouard Nicolas  <brouard@brouard.name>
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Adding link to text data files
         * imach.c: Summary: temporary working  
   2022-04-11  Nicolas Brouard   <brouard@ined.fr>
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)  
   2022-04-05  Brouard Nicolas  <brouard@ined.fr>
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Fixed covariates (dummy or quantitative)
         * imach.c: Summary: BOM files can be read now          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
         * imach.c: Summary: Graphs improvements  
   2022-03-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Saito's color  
           * 99r25 Improvements in fixing discrepancies between covariates
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>          missing in result line but in model. 
   
         * imach.c: Summary: Version 0.99r14  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: More documentation on projections  
           * ./ (Module): Fixed bug on result:
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)  
   *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some bug with rint  
           * imach.c (Module): Fix bug on quitting after result lines!
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>          (Module): Version 0.99r21
   
         * imach.c: *** empty log message ***  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
   
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
   
         * imach.c: Summary: Code into subroutine, cleanings  
   2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
         * imach.c:  
         Summary: backprojection and confidence intervals of backprevalence  2020-02-22  Brouard Nicolas  <brouard@ined.fr>
   
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>          *  (Module): imach.c Update mle=-3 (for computing Life expectancy
           and life table from the data without any state)
         * imach.c: Summary: temporary save for backprojection  
   2019-05-20  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)  
           * version.h: Summary: version 0.99.r19
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Projection syntax simplified
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          We can now start projections, forward or backward, from the mean date
           of inteviews up to or down to a number of years of projection:
         * imach.c: Summary: Labels in graphs          prevforecast=1 yearsfproj=15.3 mobil_average=0
           or
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
           or
         * imach.c: Summary: to save          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   
         * imach.c: *** empty log message ***  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: doxygen tex bug
   
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: There was some wrong lines added
   
         * imach.c: Summary: Gnuplot indexations fixed (humm)  2019-05-09  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * Makefile, imach.c: *** empty log message ***
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  
           * ChangeLog: Summary: C=
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some updates
         * imach.c: Summary: Version 0.99r12  
         Some cleanings, conformed with updated documentation.          * imach.c: Summary: Before ncovmax
   
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>          * version.h: *** empty log message ***
   
         * version.h: *** empty log message ***          * imach.c: Summary: 0.99r18 unlimited number of individuals
           The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
         * version.h: Summary:0.99r11  
   2018-12-13  Brouard Nicolas  <brouard@ined.fr>
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Bug for young ages (<-30) will be in r17
         * imach.c: Summary: Temp  
   2018-12-05  Brouard Nicolas  <brouard@ined.fr>
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>  
           * Makefile: Summary: 0.99r16
         * imach.c: Summary: Temporary  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some bugs fixed
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixing data parameter line  
           * imach.c:  Summary: Bug for young ages (<-30) will be in r17
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.99 in progress  
           * imach.c: Summary: Some bugs fixed
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>  
   2018-05-01  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c:
         * imach.c: Summary: not working          Summary: Bug fixed by providing frequencies only for non missing covariates
   
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>  2018-04-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: continue          * imach.c: Summary: some minor bugs
   
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>  2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Starting values from frequencies          * README.txt: *** empty log message ***
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Some bugs fixed, valgrind tested
   
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
         * imach.c: Summary: Fixing a lots  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some minor bugs fixed
         * imach.c: Summary: gnuplot problem in Back projection to fix  
           * version.h: *** empty log message ***
         * imach.c: Summary: Better  
   2018-02-27  Brouard Nicolas  <brouard@ined.fr>
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c:  
         Summary: Improvement in Powell output in order to copy and paste          * imach.c: Summary: Adding second argument for quitting
   
         * imach.c: Summary: Starting tests of 0.99  2018-02-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: to valgrind          * Makefile, README.txt, imach.c: Summary: 0.99r15
           New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>  
   2017-07-20  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: temporary working
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>  
   2017-07-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
         * imach.c: Summary: not working  
   2017-07-17  Brouard Nicolas  <brouard@ined.fr>
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: BOM files can be read now
         * imach.c: Summary: not working  
   2017-06-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Not working  
           * imach.c: Summary: Graphs improvements
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Saito's color
         * imach.c: Summary: Completing for func too  
   2017-06-29  Brouard Nicolas  <brouard@ined.fr>
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Version 0.99r14
         * imach.c: Summary: Fixing some arrays, still debugging  
   2017-06-27  Brouard Nicolas  <brouard@ined.fr>
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: More documentation on projections
         * imach.c:  
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods          * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
   
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bug with rint
   
         * imach.c: Summary: temp  2017-05-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: saving but not running          * imach.c: *** empty log message ***
   
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  2017-05-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixes          * imach.c: Summary: Code into subroutine, cleanings
   
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  2017-05-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7          * imach.c:
           Summary: backprojection and confidence intervals of backprevalence
         * setup.iss, Makefile, version.h: *** empty log message ***  
   2017-05-13  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary  
           * imach.c: Summary: temporary save for backprojection
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
   2017-04-26  Brouard Nicolas  <brouard@ined.fr>
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
         * imach.c: Summary: minor bug  
           * imach.c: Summary: Labels in graphs
         * imach.c: Summary: 0.99r2  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: to save
         * imach.c: *** empty log message ***  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c: Summary: 0.99 Back projections  
   2017-04-05  Brouard Nicolas  <brouard@ined.fr>
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
         * imach.c: Summary: Experimental backcast  
   2017-04-04  Brouard Nicolas  <brouard@ined.fr>
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Gnuplot indexations fixed (humm)
         * imach.c: Summary: 0.98r4 Warning and status=-2  
           * imach.c:
         Version 0.98r4 is now:          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
          - displaying an error when status is -1, date of interview unknown and date of death known;  
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
         Older changes concerning s=-2, dating from 2005 have been supersed.  
           * imach.c: Summary: Version 0.99r12
         * Makefile: *** empty log message ***          Some cleanings, conformed with updated documentation.
   
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>  2017-03-30  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * version.h: *** empty log message ***
   
         * imach.c: Summary: 0.98r4 working          * version.h: Summary:0.99r11
   
         * Makefile: Summary: linuxrpm added  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Temp
   
         * imach.c: Summary: temporary not working  2017-03-27  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Temporary
   
         * imach.c: Summary: 0.98r4  2017-03-08  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Fixing data parameter line
   
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile:          * imach.c: Summary: 0.99 in progress
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  
   2016-09-15  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: minor typo  
           * imach.c: *** empty log message ***
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
           * imach.c: Summary: not working
         Author: Nicolas Brouard  
   2016-09-08  Brouard Nicolas  <brouard@ined.fr>
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: continue
         * imach.c: Summary: Start working on projected prevalences  
   2016-09-07  Brouard Nicolas  <brouard@ined.fr>
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Starting values from frequencies
         * imach.c: Summary: Adding ftolpl parameter  
         Author: N Brouard          * imach.c: *** empty log message ***
   
         We had difficulties to get smoothed confidence intervals. It was due  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
         to the period prevalence which wasn't computed accurately. The inner  
         parameter ftolpl is now an outer parameter of the .imach parameter          * imach.c: *** empty log message ***
         file after estepm. If ftolpl is small 1.e-4 and estepm too,  
         computation are long.  2016-08-30  Brouard Nicolas  <brouard@ined.fr>
   
         * version.h: *** empty log message ***          * imach.c: Summary: Fixing a lots
   
         * imach.c: Summary: temporary  2016-08-29  Brouard Nicolas  <brouard@ined.fr>
   
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: gnuplot problem in Back projection to fix
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Better
   
         * setup.iss.in: Summary: some new subdirs  2016-08-26  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c:
           Summary: Improvement in Powell output in order to copy and paste
         * setup.iss.in:  
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts          * imach.c: Summary: Starting tests of 0.99
   
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: to valgrind
   
         * imach.c: *** empty log message ***  2016-08-25  Brouard Nicolas  <brouard@ined.fr>
   
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c: *** empty log message ***
   
         * imach.c:  2016-08-23  Brouard Nicolas  <brouard@ined.fr>
         Summary: 0.98r3 some clarification for graphs on likelihood contributions  
           * imach.c: *** empty log message ***
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: not working
         * imach.c: Summary: Some new graphs of contribution to likelihood  
   2016-08-22  Brouard Nicolas  <brouard@ined.fr>
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: not working
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake          * imach.c: Summary: Not working
   
         * imach.c: Summary: looking at better estimation of the hessian  2016-07-23  Brouard Nicolas  <brouard@ined.fr>
   
         Also a better criteria for convergence to the period prevalence And          * imach.c: Summary: Completing for func too
         therefore adding the number of years needed to converge. (The  
         prevalence in any alive state shold sum to one  2016-07-22  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Fixing some arrays, still debugging
   
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>  2016-07-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c:
         Summary: Adding some overall graph on contribution to likelihood. Might change          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
   
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: temp
   
         * imach.c: Summary: 0.98r0          * imach.c: Summary: saving but not running
   
         - Some new graphs like survival functions  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
         - Some bugs fixed like model=1+age+V2.  
           * imach.c: Summary: Fixes
         * ChangeLog, Makefile: Summary: 0.98r0  
   2016-02-19  Brouard Nicolas  <brouard@ined.fr>
         * CMakeLists.txt: Summary: Some tests for setup.iss  
           * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
           * setup.iss, Makefile, version.h: *** empty log message ***
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  
           * imach.c: Summary: temporary
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  
   2016-02-17  Brouard Nicolas  <brouard@ined.fr>
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.  
           * imach.c: Summary: Probably last 0.98 stable version 0.98r6
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
   2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  
           * imach.c: Summary: minor bug
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>  
           * imach.c: Summary: 0.99r2
         * imach.c (Module): Merging 1.61 to 1.162  
   2016-02-15  Brouard Nicolas  <brouard@ined.fr>
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  
           * imach.c: *** empty log message ***
         * prevlim.h (Module):  
   2016-02-12  Brouard Nicolas  <brouard@ined.fr>
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>  
           * imach.c: Summary: 0.99 Back projections
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...  
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  2015-12-23  Brouard Nicolas  <brouard@ined.fr>
   
 2010-04-29  brouard  <brouard@ined.fr>          * imach.c: Summary: Experimental backcast
   
         * imach.c (Module): Checking covariates for more complex models  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
         than V1+V2. A lot of change to be done. Unstable.  
           * imach.c: Summary: 0.98r4 Warning and status=-2
 2010-04-26  brouard  <brouard@ined.fr>  
           Version 0.98r4 is now:
         * imach.c (Module): merging some libgsl code. Fixing computation           - displaying an error when status is -1, date of interview unknown and date of death known;
         of likelione (using inter/intrapolation if mle = 0) in order to           - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         get same likelihood as if mle=1.          Older changes concerning s=-2, dating from 2005 have been supersed.
         Some cleaning of code and comments added.  
           * Makefile: *** empty log message ***
 2009-10-29  brouard  <brouard@ined.fr>  
   2015-12-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  
           * Makefile: *** empty log message ***
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.98r4 working
         * imach.c (Module): Clarifications on computing e.j  
           * Makefile: Summary: linuxrpm added
 2006-04-28  Brouard Nicolas  <brouard@localhost>  
           * Makefile: *** empty log message ***
         * imach.c (Module): Yes the sum of survivors was wrong since  
         imach-114 because nhstepm was no more computed in the age          * imach.c: Summary: temporary not working
         loop. Now we define nhstepma in the age loop.  
         (Module): In order to speed up (in case of numerous covariates) we  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
         compute health expectancies (without variances) in a first step  
         and then all the health expectancies with variances or standard          * imach.c: Summary: 0.98r4
         deviation (needs data from the Hessian matrices) which slows the  
         computation.  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
         In the future we should be able to stop the program is only health  
         expectancies and graph are needed without standard deviations.          * Makefile: *** empty log message ***
   
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.iss (Module):          * Makefile:
           Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         * imach.c (Module): bugs in evsi + population file added in htm output file  
           * imach.c: Summary: minor typo
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
         * imach.c (Module):  
           Author: Nicolas Brouard
 2006-03-20  Brouard Nicolas  <brouard@localhost>  
   2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): <title> changed, corresponds to .htm file  
         name. <head> headers where missing.          * imach.c: Summary: Start working on projected prevalences
   
         * Makefile (Module): 0.98g  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Weights can have a decimal point as for          * imach.c: Summary: Adding ftolpl parameter
         English (a comma might work with a correct LC_NUMERIC environment,          Author: N Brouard
         otherwise the weight is truncated).  
         Modification of warning when the covariates values are not 0 or          We had difficulties to get smoothed confidence intervals. It was due
         1.          to the period prevalence which wasn't computed accurately. The inner
         Version 0.98g          parameter ftolpl is now an outer parameter of the .imach parameter
           file after estepm. If ftolpl is small 1.e-4 and estepm too,
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          computation are long.
   
         * imach.c (Module): Comments concerning covariates added          * version.h: *** empty log message ***
   
         * noreg-setup.iss (Module): Version 0.98f          * imach.c: Summary: temporary
   
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): refinements in the computation of lli if          * Makefile: *** empty log message ***
         status=-2 in order to have more reliable computation if stepm is  
         not 1 month. Version 0.98f          * setup.iss.in: Summary: some new subdirs
   
 2006-03-15  Brouard Nicolas  <brouard@localhost>          * imach.c: *** empty log message ***
   
         * imach.c (Module): Bug if status = -2, the loglikelihood was          * setup.iss.in:
         computed as likelihood omitting the logarithm. Version O.98e          Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
   
 2006-03-14  Brouard Nicolas  <brouard@localhost>  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): varevsij Comments added explaining the second          * imach.c: *** empty log message ***
         table of variances if popbased=1 .  
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
         (Module): Function pstamp added  
         (Module): Version 0.98d          * imach.c:
           Summary: 0.98r3 some clarification for graphs on likelihood contributions
 2006-03-06  Brouard Nicolas  <brouard@localhost>  
   2015-10-01  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Variance-covariance wrong links and  
         varian-covariance of ej. is needed (Saito).          * imach.c: Summary: Some new graphs of contribution to likelihood
   
 2006-02-27  Brouard Nicolas  <brouard@localhost>  2015-09-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): One freematrix added in mlikeli!          * Makefile:
           Summary: Version read from version.h, itself read with cmake
 2006-02-26  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: looking at better estimation of the hessian
         * imach.c (Module): Some improvements in processing parameter  
         filename with strsep.          Also a better criteria for convergence to the period prevalence And
           therefore adding the number of years needed to converge. (The
 2006-02-24  Brouard Nicolas  <brouard@localhost>          prevalence in any alive state shold sum to one
   
         * imach.c (Module): Memory leaks checks with valgrind and:          * Makefile: *** empty log message ***
         datafile was not closed, some imatrix were not freed and on matrix  
         allocation too.  2015-09-22  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c:
           Summary: Adding some overall graph on contribution to likelihood. Might change
         * strsep.c (Module): Inclusion because not in mingw32!!!  
   2015-09-15  Brouard Nicolas  <brouard@ined.fr>
         * setup.iss.in (Module): IMACHSETUPVERSION added  
           * Makefile: *** empty log message ***
         * noreg-setup.iss (Module): added to cvs tree  
           * imach.c: Summary: 0.98r0
         * Makefile (Module): IMACHSETUPVERSION added  
           - Some new graphs like survival functions
 2006-01-30  BROUARD Nicolas  <brouard@localhost>          - Some bugs fixed like model=1+age+V2.
   
         * Makefile (Module, Module): Latest Makefile          * ChangeLog, Makefile: Summary: 0.98r0
   
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe          * CMakeLists.txt: Summary: Some tests for setup.iss
   
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * noreg-setup.iss (Module): ADDED          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
   
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
   
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
   
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
   
 2005-09-30    <lievre@PC_00595>          * imach.c (Module): Merging 1.61 to 1.162
   
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         (Module): If the status is missing at the last wave but we know  
         that the person is alive, then we can code his/her status as -2          * prevlim.h (Module): 
         (instead of missing=-1 in earlier versions) and his/her  
         contributions to the likelihood is 1 - Prob of dying from last  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  
         the healthy state at last known wave). Version is 0.98          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
           (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
 2004-05-20  Brouard Nicolas  <brouard@localhost>  
   2010-04-29  brouard  <brouard@ined.fr>
         * imach.c (Repository):  
         Agnes added a direct estimation of mortality (without the need of          * imach.c (Module): Checking covariates for more complex models
         computing period prevalence and differential mortality). Thus here          than V1+V2. A lot of change to be done. Unstable.
         is version 0.97a which has been distributed to some people at  
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  2010-04-26  brouard  <brouard@ined.fr>
         mortality using covariates is not done today. Estimating direct  
         mortality is a very different process because it doesn't need          * imach.c (Module): merging some libgsl code. Fixing computation
         interpolation because it is easy to get the lx from the force of          of likelione (using inter/intrapolation if mle = 0) in order to
         the mortality mux in the simplest case as for a Gompertz (log mux          get same likelihood as if mle=1.
         = a + b*x . But we have been able to incorporate the new code          Some cleaning of code and comments added.
         within former imach program (0.96d) without deteriorating too much  
         the understanding of the program.  2009-10-29  brouard  <brouard@ined.fr>
   
 2003-06-25    <brouard@BROUARD>          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
   
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  2006-06-30  Brouard Nicolas  <brouard@localhost>
         exist so I changed back to asctime which exists.  
         (Module): Version 0.96b          * imach.c (Module): Clarifications on computing e.j
   
 2003-06-24    <brouard@BROUARD>  2006-04-28  Brouard Nicolas  <brouard@localhost>
   
         * imach.c (Module): Some bugs corrected for windows. Also, when          * imach.c (Module): Yes the sum of survivors was wrong since
         mle=-1 a template is output in file "or"mypar.txt with the design          imach-114 because nhstepm was no more computed in the age
         of the covariance matrix to be input.          loop. Now we define nhstepma in the age loop.
           (Module): In order to speed up (in case of numerous covariates) we
 2003-06-25  Brouard Nicolas  <brouard@homebrou>          compute health expectancies (without variances) in a first step
           and then all the health expectancies with variances or standard
         * imach.c (Repository): Duplicated warning errors corrected.          deviation (needs data from the Hessian matrices) which slows the
         (Repository): Elapsed time after each iteration is now output. It          computation.
         helps to forecast when convergence will be reached. Elapsed time          In the future we should be able to stop the program is only health
         is stamped in powell.  We created a new html file for the graphs          expectancies and graph are needed without standard deviations.
         concerning matrix of covariance. It has extension -cov.htm.  
   2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  
           * imach.iss (Module): 
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  
           * imach.c (Module): bugs in evsi + population file added in htm output file
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  
   2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  
           * imach.c (Module): 
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  
   2006-03-20  Brouard Nicolas  <brouard@localhost>
   
         * imach.c (Repository): Check when date of death was earlier that          * imach.c (Module): <title> changed, corresponds to .htm file
         current date of interview. It may happen when the death was just          name. <head> headers where missing.
         prior to the death. In this case, dh was negative and likelihood  
         was wrong (infinity). We still send an "Error" but patch by          * Makefile (Module): 0.98g
         assuming that the date of death was just one stepm after the  
         interview.          * imach.c (Module): Weights can have a decimal point as for
         (Repository): Because some people have very long ID (first column)          English (a comma might work with a correct LC_NUMERIC environment,
         we changed int to long in num[] and we added a new lvector for          otherwise the weight is truncated).
         memory allocation. But we also truncated to 8 characters (left          Modification of warning when the covariates values are not 0 or
         truncation)          1. 
           Version 0.98g
         (Repository): No more line truncation errors.  
   2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): Comments concerning covariates added
         * imach.c (Repository): Add of a routine likelione (likelihood  
         only once) which prints on a text file          * noreg-setup.iss (Module): Version 0.98f
         (ilk) the contributions to the likelihood for each  
         individual/wave.          * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
   
 2003-06-13  Brouard Nicolas  <brouard@homebrou>          * imach.c (Module): refinements in the computation of lli if
         * imach.c (Repository): Replace "freqsummary" at a correct          status=-2 in order to have more reliable computation if stepm is
         place. It differs from routine "prevalence" which may be called          not 1 month. Version 0.98f
         many times. Probs is memory consuming and must be used with  
         parcimony.  2006-03-15  Brouard Nicolas  <brouard@localhost>
   
 2003-06-17    <brouard@BROUARD>          * imach.c (Module): Bug if status = -2, the loglikelihood was
           computed as likelihood omitting the logarithm. Version O.98e
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.  2006-03-14  Brouard Nicolas  <brouard@localhost>
   
 2003-05-16  Brouard Nicolas  <brouard@brouard>          * imach.c (Module): varevsij Comments added explaining the second
         * imach.c (Module): Insert of a warning if the delay between two          table of variances if popbased=1 .
         waves is negative.          (Module): Covariances of eij, ekl added, graphs fixed, new html link.
           (Module): Function pstamp added
         * imach.c (Module):          (Module): Version 0.98d 
   
 2003-05-03    <brouard@BROUARD>  2006-03-06  Brouard Nicolas  <brouard@localhost>
   
         * imach.c: Some cleaning          * imach.c (Module): Variance-covariance wrong links and
           varian-covariance of ej. is needed (Saito).
 2003-03-28    <brouard@BROUARD>  
         * imach.c (Module): In version up to 0.92 likelihood was computed  2006-02-27  Brouard Nicolas  <brouard@localhost>
         as if date of death was unknown. Death was treated as any other  
         health state: the date of the interview describes the actual state          * imach.c (Module): One freematrix added in mlikeli!
         and not the date of a change in health state. The former idea was  
         to consider that at each interview the state was recorded  2006-02-26  Brouard Nicolas  <brouard@localhost>
         (healthy, disable or death) and IMaCh was corrected; but when we  
         introduced the exact date of death then we should have modified          * imach.c (Module): Some improvements in processing parameter
         the contribution of an exact death to the likelihood. This new          filename with strsep.
         contribution is smaller and very dependent of the step unit  
         stepm. It is no more the probability to die between last interview  2006-02-24  Brouard Nicolas  <brouard@localhost>
         and month of death but the probability to survive from last  
         interview up to one month before death multiplied by the          * imach.c (Module): Memory leaks checks with valgrind and:
         probability to die within a month. Thanks to Chris          datafile was not closed, some imatrix were not freed and on matrix
         Jackson for correcting this bug.  Former versions increased          allocation too.
         mortality artificially. The bad side is that we add another loop  
         which slows down the processing. The difference can be up to 10%  2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         lower mortality.  
           * strsep.c (Module): Inclusion because not in mingw32!!!
 2002-05-30    <brouard@BROUARD>  
         *          * setup.iss.in (Module): IMACHSETUPVERSION added
         * imach.c (Module): Add correlation matrix of one-step  
         probabilities and covariance matrix          * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

Removed from v.1.47  
changed lines
  Added in v.1.65


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