Diff for /imach/src/ChangeLog between versions 1.49 and 1.67

version 1.49, 2022/04/11 16:17:28 version 1.67, 2023/05/23 12:25:36
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 2022-04-11  Nicolas Brouard   <brouard@ined.fr>  2023-05-23  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed          * imach.c (Module): Fixed PROB_r 
   
 2022-04-05  Brouard Nicolas  <brouard@ined.fr>  2023-05-22  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): Fixed covariates (dummy or quantitative)          * imach.c (Module): In the ILK....txt file, the number of columns
         with missing values have never been allowed but are ERRORS and          before the covariates values is dependent of the number of states (16+nlstate): 0.99r46
         program quits. Standard deviations of fixed covariates were  
         wrongly computed. Mean and standard deviations of time varying  2023-05-08  Nicolas Brouard   <brouard@ined.fr>
         covariates are still not computed.  
           *  (Module): Error V0 when result:. and model 1+age+V1: fixed
 2022-03-17  Brouard Nicolas  <brouard@ined.fr>  
   2023-04-29  Nicolas Brouard  <brouard@ined.fr>
         * 99r25 Improvements in fixing discrepancies between covariates  
         missing in result line but in model.          * imach.c (Module): Inverting the model equation and fixingg bugs
           in the drawings
 *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>          "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
         * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett  
   2023-04-24  Nicolas Brouard  <brouard@ined.fr>
 *2021-03-08  Nicolas Brouard   <brouard@ined.fr>  
           * imach.c (Module): some bugs in printinggnuplot 
         * ./ (Module): Fixed bug on result:  
   2022-09-19  Nicolas Brouard   <brouard@ined.fr>
 *2021-02-20  Nicolas Brouard   <brouard@ined.fr>  
           * imach.c (Module): Version 0.99r42 needed a newer version of
         * imach.c (Module): Fix bug on quitting after result lines!          Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         (Module): Version 0.99r21          version 5.0 or 5.1 distributed with IMaCh.
   
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>  2022-09-18  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error          * imach.c (Module): Fixing when a state in the data is 0 or higher
           than lstate+ndeath. Fixing the plot of contribution to Likelihood.
   
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>  2022-09-16  Nicolas Brouard   <brouard@ined.fr>
   
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.          * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
   
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
         and life table from the data without any state)  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Version 0.99r39 with colored dummy covariates
         * version.h: Summary: version 0.99.r19          (fixed or time varying), using new last columns of
           ILK_parameter.txt file.
         * imach.c: Summary: Projection syntax simplified  
         We can now start projections, forward or backward, from the mean date  2022-09-11  Nicolas Brouard   <brouard@ined.fr>
         of inteviews up to or down to a number of years of projection:  
         prevforecast=1 yearsfproj=15.3 mobil_average=0          * imach.c (Module): Adding timevarying products of any kinds,
         or          should work before shifting cotvar from ncovcol+nqv columns in
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0          order to have a correspondance between the column of cotvar and
         or          the id of column.
         prevbackcast=1 yearsbproj=12.3 mobil_average=1          (Module): Some cleaning and adding covariates in ILK.txt
         or  
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1  2022-09-09  Nicolas Brouard   <brouard@ined.fr>
   
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Many improvements for fixing products of fixed
           timevarying as well as fixed * fixed, and test with quantitative
         * imach.c: Summary: doxygen tex bug          covariate.
   
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>  2022-09-04  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: There was some wrong lines added          * imach.c (Module): Now the easy runs i.e. without result or
           model=1+age only did not work. The defautl combination should be 1
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>          and not 0 because everything hasn't been tranformed yet.
   
         * Makefile, imach.c: *** empty log message ***  2022-09-02  Nicolas Brouard   <brouard@ined.fr>
   
         * ChangeLog: Summary: C=          * imach.c: Version 0.99r35 because it outputs same results with
           1+age+V1+V1*age for females and 1+age for females only
         * imach.c: Summary: Some updates          (education=1 noweight)
   
         * imach.c: Summary: Before ncovmax  2022-08-31  Nicolas Brouard   <brouard@ined.fr>
   
         * version.h: *** empty log message ***          * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
   
         * imach.c: Summary: 0.99r18 unlimited number of individuals  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.  
           * imach.c (Module): Version 0.99r33 A lot of changes in
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>          reassigning covariates: my first idea was that people will always
           use the first covariate V1 into the model but in fact they are
         * imach.c: Summary: Bug for young ages (<-30) will be in r17          producing data with many covariates and can use an equation model
           with some of the covariate; it means that in a model V2+V3 instead
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>          of codtabm(k,Tvaraff[j]) which calculates for combination k, for
           three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         * Makefile: Summary: 0.99r16          the equation model is restricted to two variables only (V2, V3)
           and the combination for V2 should be codtabm(k,1) instead of
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          (codtabm(k,2), and the code should be
           codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
         * imach.c: Summary: Some bugs fixed          made. All of these should be simplified once a day like we did in
           hpxij() for example by using precov[nres] which is computed in
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          decoderesult for each nres of each resultline. Loop should be done
           on the equation model globally by distinguishing only product with
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17          age (which are changing with age) and no more on type of
           covariates, single dummies, single covariates. 
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  
   2022-08-06  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some bugs fixed  
           *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>  
   2022-08-03  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  
         Summary: Bug fixed by providing frequencies only for non missing covariates          *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
   
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>  2022-07-25  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: some minor bugs          * imach.c (Module): Error cptcovn instead of nsd in bmij (was
           coredumped, revealed by Feiuno, thank you.
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>  
   2022-07-23  Nicolas Brouard   <brouard@ined.fr>
         * README.txt: *** empty log message ***  
           * r29 W and not sqrt(Wald)
         * imach.c: Summary: Some bugs fixed, valgrind tested  
   2022-07-22  Nicolas Brouard   <brouard@ined.fr>
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>  
           *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  
   2022-06-02  Brouard Nicolas  <brouard@brouard.name>
         * imach.c:  
         Summary: Computing mean and stdeviation of fixed quantitative variables          * imach.c (Module): Adding the Wald tests from the log to the main
           htm for better display of the maximum likelihood estimators.
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>  
   2022-05-30  Brouard Nicolas  <brouard@brouard.name>
         * imach.c: Summary: Some minor bugs fixed  
           * imach.c: With products of covariates (age or dummies or
         * version.h: *** empty log message ***          quantitatives), estimates of parameters were good but when
           estimating variances the positions of newly created covariates
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>          were wrongly assigned and results were wrong. Thank to Feinua_Sun!
   
         * imach.c: *** empty log message ***  2022-05-24  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Adding second argument for quitting          * imach.c (Module): Some attempts to find a bug of wrong estimates
           of confidencce intervals with product in the equation modelC
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  
   2022-05-15  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, README.txt, imach.c: Summary: 0.99r15  
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          * imach.c (Module):  Some minor improvements
   
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: temporary working          * imach.c (Module): Adding link to text data files
   
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>  2022-04-11  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)          * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
   
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>  2022-04-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: BOM files can be read now          * imach.c (Module): Fixed covariates (dummy or quantitative)
           with missing values have never been allowed but are ERRORS and
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>          program quits. Standard deviations of fixed covariates were
           wrongly computed. Mean and standard deviations of time varying
         * imach.c: Summary: Graphs improvements          covariates are still not computed.
   
         * imach.c: Summary: Saito's color  2022-03-17  Brouard Nicolas  <brouard@ined.fr>
   
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>          * 99r25 Improvements in fixing discrepancies between covariates
           missing in result line but in model. 
         * imach.c: Summary: Version 0.99r14  
   *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
   
         * imach.c: Summary: More documentation on projections  *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)          * ./ (Module): Fixed bug on result:
   
         * imach.c: Summary: Some bug with rint  *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
   
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Fix bug on quitting after result lines!
           (Module): Version 0.99r21
         * imach.c: *** empty log message ***  
   2021-02-12  Nicolas Brouard   <brouard@ined.fr>
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): The use of a Windows BOM (huge) file is now an error
         * imach.c: Summary: Code into subroutine, cleanings  
   
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>  2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
   
         * imach.c:          *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
         Summary: backprojection and confidence intervals of backprevalence  
   2020-02-22  Brouard Nicolas  <brouard@ined.fr>
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Update mle=-3 (for computing Life expectancy
         * imach.c: Summary: temporary save for backprojection          and life table from the data without any state)
   
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)  2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>          * version.h: Summary: version 0.99.r19
   
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          * imach.c: Summary: Projection syntax simplified
           We can now start projections, forward or backward, from the mean date
         * imach.c: Summary: Labels in graphs          of inteviews up to or down to a number of years of projection:
           prevforecast=1 yearsfproj=15.3 mobil_average=0
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>          or
           prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
         * imach.c: Summary: to save          or
           prevbackcast=1 yearsbproj=12.3 mobil_average=1
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>          or
           prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
         * imach.c: *** empty log message ***  
   2019-05-18  Brouard Nicolas  <brouard@ined.fr>
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: doxygen tex bug
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1  
   2019-05-16  Brouard Nicolas  <brouard@ined.fr>
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: There was some wrong lines added
         * imach.c: Summary: Gnuplot indexations fixed (humm)  
   2019-05-09  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3          * Makefile, imach.c: *** empty log message ***
   
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>          * ChangeLog: Summary: C=
   
         * imach.c: Summary: Version 0.99r12          * imach.c: Summary: Some updates
         Some cleanings, conformed with updated documentation.  
           * imach.c: Summary: Before ncovmax
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: *** empty log message ***
         * version.h: *** empty log message ***  
           * imach.c: Summary: 0.99r18 unlimited number of individuals
         * version.h: Summary:0.99r11          The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Temp          * imach.c: Summary: Bug for young ages (<-30) will be in r17
   
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>  2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Temporary          * Makefile: Summary: 0.99r16
   
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed          * imach.c: Summary: Some bugs fixed
   
         * imach.c: Summary: Fixing data parameter line  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>          * imach.c:  Summary: Bug for young ages (<-30) will be in r17
   
         * imach.c: Summary: 0.99 in progress  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bugs fixed
   
         * imach.c: *** empty log message ***  2018-05-01  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * imach.c:
           Summary: Bug fixed by providing frequencies only for non missing covariates
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>  
   2018-04-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: continue  
           * imach.c: Summary: some minor bugs
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>  
   2018-04-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Starting values from frequencies  
           * README.txt: *** empty log message ***
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Some bugs fixed, valgrind tested
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>  
   2018-04-20  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: Summary: Fixing a lots          Summary: Computing mean and stdeviation of fixed quantitative variables
   
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>  2018-04-19  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: gnuplot problem in Back projection to fix          * imach.c: Summary: Some minor bugs fixed
   
         * imach.c: Summary: Better          * version.h: *** empty log message ***
   
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>  2018-02-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: *** empty log message ***
         Summary: Improvement in Powell output in order to copy and paste  
           * imach.c: Summary: Adding second argument for quitting
         * imach.c: Summary: Starting tests of 0.99  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: to valgrind  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
         * imach.c: *** empty log message ***  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: temporary working
   
         * imach.c: *** empty log message ***  2017-07-19  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
   
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>  2017-07-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * imach.c: Summary: BOM files can be read now
   
         * imach.c: Summary: Not working  2017-06-30  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Graphs improvements
   
         * imach.c: Summary: Completing for func too          * imach.c: Summary: Saito's color
   
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>  2017-06-29  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixing some arrays, still debugging          * imach.c: Summary: Version 0.99r14
   
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>  2017-06-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: Summary: More documentation on projections
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  
           * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some bug with rint
         * imach.c: Summary: temp  
   2017-05-24  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: saving but not running  
           * imach.c: *** empty log message ***
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  
   2017-05-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixes  
           * imach.c: Summary: Code into subroutine, cleanings
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  
   2017-05-18  Brouard Nicolas  <brouard@ined.fr>
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  
           * imach.c:
         * setup.iss, Makefile, version.h: *** empty log message ***          Summary: backprojection and confidence intervals of backprevalence
   
         * imach.c: Summary: temporary  2017-05-13  Brouard Nicolas  <brouard@ined.fr>
   
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: temporary save for backprojection
   
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6          * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
   
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  2017-04-26  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: minor bug          * imach.c: Summary: imach 0.99r13 Some bugs fixed
   
         * imach.c: Summary: 0.99r2          * imach.c: Summary: Labels in graphs
   
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>  2017-04-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: Summary: to save
   
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>  2017-04-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99 Back projections          * imach.c: *** empty log message ***
   
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>  2017-04-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Experimental backcast          * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
   
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>  2017-04-04  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4 Warning and status=-2          * imach.c: Summary: Gnuplot indexations fixed (humm)
   
         Version 0.98r4 is now:          * imach.c:
          - displaying an error when status is -1, date of interview unknown and date of death known;          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Version 0.99r12
           Some cleanings, conformed with updated documentation.
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>  
   2017-03-30  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * version.h: *** empty log message ***
         * imach.c: Summary: 0.98r4 working  
           * version.h: Summary:0.99r11
         * Makefile: Summary: linuxrpm added  
   2017-03-29  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: Temp
         * imach.c: Summary: temporary not working  
   2017-03-27  Brouard Nicolas  <brouard@ined.fr>
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Temporary
         * imach.c: Summary: 0.98r4  
   2017-03-08  Brouard Nicolas  <brouard@ined.fr>
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
         * Makefile: *** empty log message ***  
           * imach.c: Summary: Fixing data parameter line
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>  
   2016-12-15  Brouard Nicolas  <brouard@ined.fr>
         * Makefile:  
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more          * imach.c: Summary: 0.99 in progress
   
         * imach.c: Summary: minor typo  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional          * imach.c: *** empty log message ***
   
         Author: Nicolas Brouard          * imach.c: Summary: not working
   
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  2016-09-08  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Start working on projected prevalences          * imach.c: Summary: continue
   
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>  2016-09-07  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Adding ftolpl parameter          * imach.c: Summary: Starting values from frequencies
         Author: N Brouard  
           * imach.c: *** empty log message ***
         We had difficulties to get smoothed confidence intervals. It was due  
         to the period prevalence which wasn't computed accurately. The inner  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
         parameter ftolpl is now an outer parameter of the .imach parameter  
         file after estepm. If ftolpl is small 1.e-4 and estepm too,          * imach.c: *** empty log message ***
         computation are long.  
   2016-08-30  Brouard Nicolas  <brouard@ined.fr>
         * version.h: *** empty log message ***  
           * imach.c: Summary: Fixing a lots
         * imach.c: Summary: temporary  
   2016-08-29  Brouard Nicolas  <brouard@ined.fr>
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: gnuplot problem in Back projection to fix
         * Makefile: *** empty log message ***  
           * imach.c: Summary: Better
         * setup.iss.in: Summary: some new subdirs  
   2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c:
         * setup.iss.in:          Summary: Improvement in Powell output in order to copy and paste
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  
           * imach.c: Summary: Starting tests of 0.99
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: to valgrind
         * imach.c: *** empty log message ***  
   2016-08-25  Brouard Nicolas  <brouard@ined.fr>
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c:  
         Summary: 0.98r3 some clarification for graphs on likelihood contributions  2016-08-23  Brouard Nicolas  <brouard@ined.fr>
   
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>          * imach.c: *** empty log message ***
   
         * imach.c: Summary: Some new graphs of contribution to likelihood          * imach.c: Summary: not working
   
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile:          * imach.c: Summary: not working
         Summary: Version read from version.h, itself read with cmake  
           * imach.c: Summary: Not working
         * imach.c: Summary: looking at better estimation of the hessian  
   2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         Also a better criteria for convergence to the period prevalence And  
         therefore adding the number of years needed to converge. (The          * imach.c: Summary: Completing for func too
         prevalence in any alive state shold sum to one  
   2016-07-22  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: Fixing some arrays, still debugging
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>  
   2016-07-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: Adding some overall graph on contribution to likelihood. Might change          * imach.c:
           Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>  
   2016-07-12  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: temp
         * imach.c: Summary: 0.98r0  
           * imach.c: Summary: saving but not running
         - Some new graphs like survival functions  
         - Some bugs fixed like model=1+age+V2.  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
   
         * ChangeLog, Makefile: Summary: 0.98r0          * imach.c: Summary: Fixes
   
         * CMakeLists.txt: Summary: Some tests for setup.iss  2016-02-19  Brouard Nicolas  <brouard@ined.fr>
   
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>          * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
   
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc          * setup.iss, Makefile, version.h: *** empty log message ***
   
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>          * imach.c: Summary: temporary
   
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.  2016-02-17  Brouard Nicolas  <brouard@ined.fr>
   
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>          * imach.c: Summary: Probably last 0.98 stable version 0.98r6
   
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  2016-02-16  Brouard Nicolas  <brouard@ined.fr>
   
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>          * imach.c: Summary: minor bug
   
         * imach.c (Module): Merging 1.61 to 1.162          * imach.c: Summary: 0.99r2
   
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  2016-02-15  Brouard Nicolas  <brouard@ined.fr>
   
         * prevlim.h (Module):          * imach.c: *** empty log message ***
   
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>  2016-02-12  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...          * imach.c: Summary: 0.99 Back projections
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
   2015-12-23  Brouard Nicolas  <brouard@ined.fr>
 2010-04-29  brouard  <brouard@ined.fr>  
           * imach.c: Summary: Experimental backcast
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
   
 2010-04-26  brouard  <brouard@ined.fr>          * imach.c: Summary: 0.98r4 Warning and status=-2
   
         * imach.c (Module): merging some libgsl code. Fixing computation          Version 0.98r4 is now:
         of likelione (using inter/intrapolation if mle = 0) in order to           - displaying an error when status is -1, date of interview unknown and date of death known;
         get same likelihood as if mle=1.           - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         Some cleaning of code and comments added.          Older changes concerning s=-2, dating from 2005 have been supersed.
   
 2009-10-29  brouard  <brouard@ined.fr>          * Makefile: *** empty log message ***
   
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
   
 2006-06-30  Brouard Nicolas  <brouard@localhost>          * Makefile: *** empty log message ***
   
         * imach.c (Module): Clarifications on computing e.j          * imach.c: Summary: 0.98r4 working
   
 2006-04-28  Brouard Nicolas  <brouard@localhost>          * Makefile: Summary: linuxrpm added
   
         * imach.c (Module): Yes the sum of survivors was wrong since          * Makefile: *** empty log message ***
         imach-114 because nhstepm was no more computed in the age  
         loop. Now we define nhstepma in the age loop.          * imach.c: Summary: temporary not working
         (Module): In order to speed up (in case of numerous covariates) we  
         compute health expectancies (without variances) in a first step  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
         and then all the health expectancies with variances or standard  
         deviation (needs data from the Hessian matrices) which slows the          * imach.c: Summary: 0.98r4
         computation.  
         In the future we should be able to stop the program is only health  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
         expectancies and graph are needed without standard deviations.  
           * Makefile: *** empty log message ***
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
   2015-11-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.iss (Module):  
           * Makefile:
         * imach.c (Module): bugs in evsi + population file added in htm output file          Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
   
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: minor typo
   
         * imach.c (Module):          * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
   
 2006-03-20  Brouard Nicolas  <brouard@localhost>          Author: Nicolas Brouard
   
         * imach.c (Module): <title> changed, corresponds to .htm file  2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         name. <head> headers where missing.  
           * imach.c: Summary: Start working on projected prevalences
         * Makefile (Module): 0.98g  
   2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Weights can have a decimal point as for  
         English (a comma might work with a correct LC_NUMERIC environment,          * imach.c: Summary: Adding ftolpl parameter
         otherwise the weight is truncated).          Author: N Brouard
         Modification of warning when the covariates values are not 0 or  
         1.          We had difficulties to get smoothed confidence intervals. It was due
         Version 0.98g          to the period prevalence which wasn't computed accurately. The inner
           parameter ftolpl is now an outer parameter of the .imach parameter
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          file after estepm. If ftolpl is small 1.e-4 and estepm too,
           computation are long.
         * imach.c (Module): Comments concerning covariates added  
           * version.h: *** empty log message ***
         * noreg-setup.iss (Module): Version 0.98f  
           * imach.c: Summary: temporary
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup  
   2015-10-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): refinements in the computation of lli if  
         status=-2 in order to have more reliable computation if stepm is          * Makefile: *** empty log message ***
         not 1 month. Version 0.98f  
           * setup.iss.in: Summary: some new subdirs
 2006-03-15  Brouard Nicolas  <brouard@localhost>  
           * imach.c: *** empty log message ***
         * imach.c (Module): Bug if status = -2, the loglikelihood was  
         computed as likelihood omitting the logarithm. Version O.98e          * setup.iss.in:
           Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
   2015-10-24  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): varevsij Comments added explaining the second  
         table of variances if popbased=1 .          * imach.c: *** empty log message ***
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  
         (Module): Function pstamp added  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
         (Module): Version 0.98d  
           * imach.c:
 2006-03-06  Brouard Nicolas  <brouard@localhost>          Summary: 0.98r3 some clarification for graphs on likelihood contributions
   
         * imach.c (Module): Variance-covariance wrong links and  2015-10-01  Brouard Nicolas  <brouard@ined.fr>
         varian-covariance of ej. is needed (Saito).  
           * imach.c: Summary: Some new graphs of contribution to likelihood
 2006-02-27  Brouard Nicolas  <brouard@localhost>  
   2015-09-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): One freematrix added in mlikeli!  
           * Makefile:
 2006-02-26  Brouard Nicolas  <brouard@localhost>          Summary: Version read from version.h, itself read with cmake
   
         * imach.c (Module): Some improvements in processing parameter          * imach.c: Summary: looking at better estimation of the hessian
         filename with strsep.  
           Also a better criteria for convergence to the period prevalence And
 2006-02-24  Brouard Nicolas  <brouard@localhost>          therefore adding the number of years needed to converge. (The
           prevalence in any alive state shold sum to one
         * imach.c (Module): Memory leaks checks with valgrind and:  
         datafile was not closed, some imatrix were not freed and on matrix          * Makefile: *** empty log message ***
         allocation too.  
   2015-09-22  Brouard Nicolas  <brouard@ined.fr>
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c:
         * strsep.c (Module): Inclusion because not in mingw32!!!          Summary: Adding some overall graph on contribution to likelihood. Might change
   
         * setup.iss.in (Module): IMACHSETUPVERSION added  2015-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * noreg-setup.iss (Module): added to cvs tree          * Makefile: *** empty log message ***
   
         * Makefile (Module): IMACHSETUPVERSION added          * imach.c: Summary: 0.98r0
   
 2006-01-30  BROUARD Nicolas  <brouard@localhost>          - Some new graphs like survival functions
           - Some bugs fixed like model=1+age+V2.
         * Makefile (Module, Module): Latest Makefile  
           * ChangeLog, Makefile: Summary: 0.98r0
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe  
           * CMakeLists.txt: Summary: Some tests for setup.iss
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  
   2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         * noreg-setup.iss (Module): ADDED  
           *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  
   2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.  
           *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  
   2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg  
           *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  
   2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
 2005-09-30    <lievre@PC_00595>  
           * imach.c (Module): Merging 1.61 to 1.162
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  
         (Module): If the status is missing at the last wave but we know  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         that the person is alive, then we can code his/her status as -2  
         (instead of missing=-1 in earlier versions) and his/her          * prevlim.h (Module): 
         contributions to the likelihood is 1 - Prob of dying from last  
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
         the healthy state at last known wave). Version is 0.98  
           * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
 2004-05-20  Brouard Nicolas  <brouard@localhost>          (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
   
         * imach.c (Repository):  2010-04-29  brouard  <brouard@ined.fr>
         Agnes added a direct estimation of mortality (without the need of  
         computing period prevalence and differential mortality). Thus here          * imach.c (Module): Checking covariates for more complex models
         is version 0.97a which has been distributed to some people at          than V1+V2. A lot of change to be done. Unstable.
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  
         mortality using covariates is not done today. Estimating direct  2010-04-26  brouard  <brouard@ined.fr>
         mortality is a very different process because it doesn't need  
         interpolation because it is easy to get the lx from the force of          * imach.c (Module): merging some libgsl code. Fixing computation
         the mortality mux in the simplest case as for a Gompertz (log mux          of likelione (using inter/intrapolation if mle = 0) in order to
         = a + b*x . But we have been able to incorporate the new code          get same likelihood as if mle=1.
         within former imach program (0.96d) without deteriorating too much          Some cleaning of code and comments added.
         the understanding of the program.  
   2009-10-29  brouard  <brouard@ined.fr>
 2003-06-25    <brouard@BROUARD>  
           * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  
         exist so I changed back to asctime which exists.  2006-06-30  Brouard Nicolas  <brouard@localhost>
         (Module): Version 0.96b  
           * imach.c (Module): Clarifications on computing e.j
 2003-06-24    <brouard@BROUARD>  
   2006-04-28  Brouard Nicolas  <brouard@localhost>
         * imach.c (Module): Some bugs corrected for windows. Also, when  
         mle=-1 a template is output in file "or"mypar.txt with the design          * imach.c (Module): Yes the sum of survivors was wrong since
         of the covariance matrix to be input.          imach-114 because nhstepm was no more computed in the age
           loop. Now we define nhstepma in the age loop.
 2003-06-25  Brouard Nicolas  <brouard@homebrou>          (Module): In order to speed up (in case of numerous covariates) we
           compute health expectancies (without variances) in a first step
         * imach.c (Repository): Duplicated warning errors corrected.          and then all the health expectancies with variances or standard
         (Repository): Elapsed time after each iteration is now output. It          deviation (needs data from the Hessian matrices) which slows the
         helps to forecast when convergence will be reached. Elapsed time          computation.
         is stamped in powell.  We created a new html file for the graphs          In the future we should be able to stop the program is only health
         concerning matrix of covariance. It has extension -cov.htm.          expectancies and graph are needed without standard deviations.
   
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.          * imach.iss (Module): 
   
 2003-06-18  Brouard Nicolas  <brouard@homebrou>          * imach.c (Module): bugs in evsi + population file added in htm output file
   
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
 2003-06-17  Brouard Nicolas  <brouard@homebrou>          * imach.c (Module): 
   
   2006-03-20  Brouard Nicolas  <brouard@localhost>
         * imach.c (Repository): Check when date of death was earlier that  
         current date of interview. It may happen when the death was just          * imach.c (Module): <title> changed, corresponds to .htm file
         prior to the death. In this case, dh was negative and likelihood          name. <head> headers where missing.
         was wrong (infinity). We still send an "Error" but patch by  
         assuming that the date of death was just one stepm after the          * Makefile (Module): 0.98g
         interview.  
         (Repository): Because some people have very long ID (first column)          * imach.c (Module): Weights can have a decimal point as for
         we changed int to long in num[] and we added a new lvector for          English (a comma might work with a correct LC_NUMERIC environment,
         memory allocation. But we also truncated to 8 characters (left          otherwise the weight is truncated).
         truncation)          Modification of warning when the covariates values are not 0 or
           1. 
         (Repository): No more line truncation errors.          Version 0.98g
   
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
         * imach.c (Repository): Add of a routine likelione (likelihood          * imach.c (Module): Comments concerning covariates added
         only once) which prints on a text file  
         (ilk) the contributions to the likelihood for each          * noreg-setup.iss (Module): Version 0.98f
         individual/wave.  
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  
         * imach.c (Repository): Replace "freqsummary" at a correct          * imach.c (Module): refinements in the computation of lli if
         place. It differs from routine "prevalence" which may be called          status=-2 in order to have more reliable computation if stepm is
         many times. Probs is memory consuming and must be used with          not 1 month. Version 0.98f
         parcimony.  
   2006-03-15  Brouard Nicolas  <brouard@localhost>
 2003-06-17    <brouard@BROUARD>  
           * imach.c (Module): Bug if status = -2, the loglikelihood was
         * timeval.h (Module): Added included file to make use of          computed as likelihood omitting the logarithm. Version O.98e
         gettimeofday working on win32 with cygwin.  
   2006-03-14  Brouard Nicolas  <brouard@localhost>
 2003-05-16  Brouard Nicolas  <brouard@brouard>  
         * imach.c (Module): Insert of a warning if the delay between two          * imach.c (Module): varevsij Comments added explaining the second
         waves is negative.          table of variances if popbased=1 .
           (Module): Covariances of eij, ekl added, graphs fixed, new html link.
         * imach.c (Module):          (Module): Function pstamp added
           (Module): Version 0.98d 
 2003-05-03    <brouard@BROUARD>  
   2006-03-06  Brouard Nicolas  <brouard@localhost>
         * imach.c: Some cleaning  
           * imach.c (Module): Variance-covariance wrong links and
 2003-03-28    <brouard@BROUARD>          varian-covariance of ej. is needed (Saito).
         * imach.c (Module): In version up to 0.92 likelihood was computed  
         as if date of death was unknown. Death was treated as any other  2006-02-27  Brouard Nicolas  <brouard@localhost>
         health state: the date of the interview describes the actual state  
         and not the date of a change in health state. The former idea was          * imach.c (Module): One freematrix added in mlikeli!
         to consider that at each interview the state was recorded  
         (healthy, disable or death) and IMaCh was corrected; but when we  2006-02-26  Brouard Nicolas  <brouard@localhost>
         introduced the exact date of death then we should have modified  
         the contribution of an exact death to the likelihood. This new          * imach.c (Module): Some improvements in processing parameter
         contribution is smaller and very dependent of the step unit          filename with strsep.
         stepm. It is no more the probability to die between last interview  
         and month of death but the probability to survive from last  2006-02-24  Brouard Nicolas  <brouard@localhost>
         interview up to one month before death multiplied by the  
         probability to die within a month. Thanks to Chris          * imach.c (Module): Memory leaks checks with valgrind and:
         Jackson for correcting this bug.  Former versions increased          datafile was not closed, some imatrix were not freed and on matrix
         mortality artificially. The bad side is that we add another loop          allocation too.
         which slows down the processing. The difference can be up to 10%  
         lower mortality.  2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
 2002-05-30    <brouard@BROUARD>          * strsep.c (Module): Inclusion because not in mingw32!!!
         *  
         * imach.c (Module): Add correlation matrix of one-step          * setup.iss.in (Module): IMACHSETUPVERSION added
         probabilities and covariance matrix  
           * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

Removed from v.1.49  
changed lines
  Added in v.1.67


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