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version 1.40, 2020/02/22 20:59:15 version 1.65, 2023/05/08 17:46:42
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 2020-02-22  Brouard Nicolas  <brouard@brouard.name>  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
   
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy          * imach.c (Module): Inverting the model equation and fixingg bugs
         and life table from the data without any state)          in the drawings
           "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
 2019-05-20  Brouard Nicolas  <brouard@brouard.name>  
   2023-04-24  Nicolas Brouard  <brouard@ined.fr>
         * version.h: Summary: version 0.99.r19  
           * imach.c (Module): some bugs in printinggnuplot 
         * imach.c: Summary: Projection syntax simplified  
         We can now start projections, forward or backward, from the mean date  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
         of inteviews up to or down to a number of years of projection:  
         prevforecast=1 yearsfproj=15.3 mobil_average=0          * imach.c (Module): Version 0.99r42 needed a newer version of
         or          Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0          version 5.0 or 5.1 distributed with IMaCh.
         or  
         prevbackcast=1 yearsbproj=12.3 mobil_average=1  2022-09-18  Nicolas Brouard   <brouard@ined.fr>
         or  
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1          * imach.c (Module): Fixing when a state in the data is 0 or higher
           than lstate+ndeath. Fixing the plot of contribution to Likelihood.
 2019-05-18  Brouard Nicolas  <brouard@brouard.name>  
   2022-09-16  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: doxygen tex bug  
           * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
 2019-05-16  Brouard Nicolas  <brouard@brouard.name>  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: There was some wrong lines added  
           * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
 2019-05-09  Brouard Nicolas  <brouard@brouard.name>  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, imach.c: *** empty log message ***  
           * imach.c (Module): Version 0.99r39 with colored dummy covariates
         * ChangeLog: Summary: C=          (fixed or time varying), using new last columns of
           ILK_parameter.txt file.
         * imach.c: Summary: Some updates  
   2022-09-11  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Before ncovmax  
           * imach.c (Module): Adding timevarying products of any kinds,
         * version.h: *** empty log message ***          should work before shifting cotvar from ncovcol+nqv columns in
           order to have a correspondance between the column of cotvar and
         * imach.c: Summary: 0.99r18 unlimited number of individuals          the id of column.
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.          (Module): Some cleaning and adding covariates in ILK.txt
   
 2018-12-13  Brouard Nicolas  <brouard@brouard.name>  2022-09-09  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Bug for young ages (<-30) will be in r17          * imach.c (Module): Many improvements for fixing products of fixed
           timevarying as well as fixed * fixed, and test with quantitative
 2018-12-05  Brouard Nicolas  <brouard@brouard.name>          covariate.
   
         * Makefile: Summary: 0.99r16  2022-09-04  Nicolas Brouard   <brouard@ined.fr>
   
 2018-05-02  Brouard Nicolas  <brouard@brouard.name>          * imach.c (Module): Now the easy runs i.e. without result or
           model=1+age only did not work. The defautl combination should be 1
         * imach.c: Summary: Some bugs fixed          and not 0 because everything hasn't been tranformed yet.
   
 2018-05-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-09-02  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17          * imach.c: Version 0.99r35 because it outputs same results with
           1+age+V1+V1*age for females and 1+age for females only
 2018-05-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          (education=1 noweight)
   
         * imach.c: Summary: Some bugs fixed  2022-08-31  Nicolas Brouard   <brouard@ined.fr>
   
 2018-05-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
   
         * imach.c:  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
         Summary: Bug fixed by providing frequencies only for non missing covariates  
           * imach.c (Module): Version 0.99r33 A lot of changes in
 2018-04-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          reassigning covariates: my first idea was that people will always
           use the first covariate V1 into the model but in fact they are
         * imach.c: Summary: some minor bugs          producing data with many covariates and can use an equation model
           with some of the covariate; it means that in a model V2+V3 instead
 2018-04-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          of codtabm(k,Tvaraff[j]) which calculates for combination k, for
           three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         * README.txt: *** empty log message ***          the equation model is restricted to two variables only (V2, V3)
           and the combination for V2 should be codtabm(k,1) instead of
         * imach.c: Summary: Some bugs fixed, valgrind tested          (codtabm(k,2), and the code should be
           codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
 2018-04-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          made. All of these should be simplified once a day like we did in
           hpxij() for example by using precov[nres] which is computed in
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16          decoderesult for each nres of each resultline. Loop should be done
           on the equation model globally by distinguishing only product with
         * imach.c:          age (which are changing with age) and no more on type of
         Summary: Computing mean and stdeviation of fixed quantitative variables          covariates, single dummies, single covariates. 
   
 2018-04-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-08-06  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some minor bugs fixed          *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
   
         * version.h: *** empty log message ***  2022-08-03  Nicolas Brouard   <brouard@ined.fr>
   
 2018-02-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
   
         * imach.c: *** empty log message ***  2022-07-25  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: Adding second argument for quitting          * imach.c (Module): Error cptcovn instead of nsd in bmij (was
           coredumped, revealed by Feiuno, thank you.
 2018-02-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-07-23  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, README.txt, imach.c: Summary: 0.99r15  
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          * r29 W and not sqrt(Wald)
   
 2017-07-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-07-22  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: temporary working          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
   
 2017-07-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-06-02  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)          * imach.c (Module): Adding the Wald tests from the log to the main
           htm for better display of the maximum likelihood estimators.
 2017-07-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-05-30  Brouard Nicolas  <brouard@brouard.name>
         * imach.c: Summary: BOM files can be read now  
           * imach.c: With products of covariates (age or dummies or
 2017-06-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          quantitatives), estimates of parameters were good but when
           estimating variances the positions of newly created covariates
         * imach.c: Summary: Graphs improvements          were wrongly assigned and results were wrong. Thank to Feinua_Sun!
   
         * imach.c: Summary: Saito's color  2022-05-24  Nicolas Brouard   <brouard@ined.fr>
   
 2017-06-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Some attempts to find a bug of wrong estimates
           of confidencce intervals with product in the equation modelC
         * imach.c: Summary: Version 0.99r14  
   2022-05-15  Nicolas Brouard   <brouard@ined.fr>
 2017-06-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module):  Some minor improvements
         * imach.c: Summary: More documentation on projections  
   2022-04-13  Brouard Nicolas  <brouard@brouard.name>
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)  
           * imach.c (Module): Adding link to text data files
         * imach.c: Summary: Some bug with rint  
   2022-04-11  Nicolas Brouard   <brouard@ined.fr>
 2017-05-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
         * imach.c: *** empty log message ***  
   2022-04-05  Brouard Nicolas  <brouard@ined.fr>
 2017-05-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Fixed covariates (dummy or quantitative)
         * imach.c: Summary: Code into subroutine, cleanings          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
 2017-05-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
         * imach.c:  
         Summary: backprojection and confidence intervals of backprevalence  2022-03-17  Brouard Nicolas  <brouard@ined.fr>
   
 2017-05-13  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * 99r25 Improvements in fixing discrepancies between covariates
           missing in result line but in model. 
         * imach.c: Summary: temporary save for backprojection  
   *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)          * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
   
 2017-04-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          * ./ (Module): Fixed bug on result:
   
         * imach.c: Summary: Labels in graphs  *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
   
 2017-04-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Fix bug on quitting after result lines!
           (Module): Version 0.99r21
         * imach.c: Summary: to save  
   2021-02-12  Nicolas Brouard   <brouard@ined.fr>
 2017-04-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): The use of a Windows BOM (huge) file is now an error
         * imach.c: *** empty log message ***  
   
 2017-04-05  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1          *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
   
 2017-04-04  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2020-02-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Gnuplot indexations fixed (humm)          *  (Module): imach.c Update mle=-3 (for computing Life expectancy
           and life table from the data without any state)
         * imach.c:  
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-03  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * version.h: Summary: version 0.99.r19
   
         * imach.c: Summary: Version 0.99r12          * imach.c: Summary: Projection syntax simplified
         Some cleanings, conformed with updated documentation.          We can now start projections, forward or backward, from the mean date
           of inteviews up to or down to a number of years of projection:
 2017-03-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          prevforecast=1 yearsfproj=15.3 mobil_average=0
           or
         * version.h: *** empty log message ***          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
           or
         * version.h: Summary:0.99r11          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
 2017-03-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   
         * imach.c: Summary: Temp  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
 2017-03-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: doxygen tex bug
   
         * imach.c: Summary: Temporary  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
 2017-03-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: There was some wrong lines added
   
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed  2019-05-09  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixing data parameter line          * Makefile, imach.c: *** empty log message ***
   
 2016-12-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * ChangeLog: Summary: C=
   
         * imach.c: Summary: 0.99 in progress          * imach.c: Summary: Some updates
   
 2016-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Before ncovmax
   
         * imach.c: *** empty log message ***          * version.h: *** empty log message ***
   
         * imach.c: Summary: not working          * imach.c: Summary: 0.99r18 unlimited number of individuals
           The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
 2016-09-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2018-12-13  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: continue  
           * imach.c: Summary: Bug for young ages (<-30) will be in r17
 2016-09-07  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2018-12-05  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Starting values from frequencies  
           * Makefile: Summary: 0.99r16
         * imach.c: *** empty log message ***  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2016-09-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Some bugs fixed
         * imach.c: *** empty log message ***  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2016-08-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c:  Summary: Bug for young ages (<-30) will be in r17
         * imach.c: Summary: Fixing a lots  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2016-08-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Some bugs fixed
         * imach.c: Summary: gnuplot problem in Back projection to fix  
   2018-05-01  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Better  
           * imach.c:
 2016-08-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          Summary: Bug fixed by providing frequencies only for non missing covariates
   
         * imach.c:  2018-04-27  Brouard Nicolas  <brouard@ined.fr>
         Summary: Improvement in Powell output in order to copy and paste  
           * imach.c: Summary: some minor bugs
         * imach.c: Summary: Starting tests of 0.99  
   2018-04-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: to valgrind  
           * README.txt: *** empty log message ***
 2016-08-25  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Some bugs fixed, valgrind tested
         * imach.c: *** empty log message ***  
   2018-04-20  Brouard Nicolas  <brouard@ined.fr>
 2016-08-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
         * imach.c: *** empty log message ***  
           * imach.c:
         * imach.c: Summary: not working          Summary: Computing mean and stdeviation of fixed quantitative variables
   
 2016-08-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-04-19  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * imach.c: Summary: Some minor bugs fixed
   
         * imach.c: Summary: Not working          * version.h: *** empty log message ***
   
 2016-07-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-02-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Completing for func too          * imach.c: *** empty log message ***
   
 2016-07-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Adding second argument for quitting
   
         * imach.c: Summary: Fixing some arrays, still debugging  2018-02-21  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * Makefile, README.txt, imach.c: Summary: 0.99r15
           New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
         * imach.c:  
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: temporary working
   
         * imach.c: Summary: temp  2017-07-19  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: saving but not running          * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
   
 2016-07-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-07-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixes          * imach.c: Summary: BOM files can be read now
   
 2016-02-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-06-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7          * imach.c: Summary: Graphs improvements
   
         * setup.iss, Makefile, version.h: *** empty log message ***          * imach.c: Summary: Saito's color
   
         * imach.c: Summary: temporary  2017-06-29  Brouard Nicolas  <brouard@ined.fr>
   
 2016-02-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Version 0.99r14
   
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  2017-06-27  Brouard Nicolas  <brouard@ined.fr>
   
 2016-02-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: More documentation on projections
   
         * imach.c: Summary: minor bug          * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
   
         * imach.c: Summary: 0.99r2          * imach.c: Summary: Some bug with rint
   
 2016-02-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-05-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: *** empty log message ***
   
 2016-02-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-05-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99 Back projections          * imach.c: Summary: Code into subroutine, cleanings
   
 2015-12-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-05-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Experimental backcast          * imach.c:
           Summary: backprojection and confidence intervals of backprevalence
 2015-12-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-05-13  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r4 Warning and status=-2  
           * imach.c: Summary: temporary save for backprojection
         Version 0.98r4 is now:  
          - displaying an error when status is -1, date of interview unknown and date of death known;          * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.  2017-04-26  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: imach 0.99r13 Some bugs fixed
   
 2015-12-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Labels in graphs
   
         * Makefile: *** empty log message ***  2017-04-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4 working          * imach.c: Summary: to save
   
         * Makefile: Summary: linuxrpm added  2017-04-18  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: *** empty log message ***
   
         * imach.c: Summary: temporary not working  2017-04-05  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-11  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
   
         * imach.c: Summary: 0.98r4  2017-04-04  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Gnuplot indexations fixed (humm)
   
         * Makefile: *** empty log message ***          * imach.c:
           Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
 2015-11-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-04-03  Brouard Nicolas  <brouard@ined.fr>
         * Makefile:  
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more          * imach.c: Summary: Version 0.99r12
           Some cleanings, conformed with updated documentation.
         * imach.c: Summary: minor typo  
   2017-03-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
           * version.h: *** empty log message ***
         Author: Nicolas Brouard  
           * version.h: Summary:0.99r11
 2015-11-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-03-29  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Start working on projected prevalences  
           * imach.c: Summary: Temp
 2015-11-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-03-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Adding ftolpl parameter  
         Author: N Brouard          * imach.c: Summary: Temporary
   
         We had difficulties to get smoothed confidence intervals. It was due  2017-03-08  Brouard Nicolas  <brouard@ined.fr>
         to the period prevalence which wasn't computed accurately. The inner  
         parameter ftolpl is now an outer parameter of the .imach parameter          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
         file after estepm. If ftolpl is small 1.e-4 and estepm too,  
         computation are long.          * imach.c: Summary: Fixing data parameter line
   
         * version.h: *** empty log message ***  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temporary          * imach.c: Summary: 0.99 in progress
   
 2015-10-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: *** empty log message ***
   
         * setup.iss.in: Summary: some new subdirs          * imach.c: Summary: not working
   
         * imach.c: *** empty log message ***  2016-09-08  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in:          * imach.c: Summary: continue
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  
   2016-09-07  Brouard Nicolas  <brouard@ined.fr>
 2015-10-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Starting values from frequencies
         * imach.c: *** empty log message ***  
           * imach.c: *** empty log message ***
 2015-10-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2016-09-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: 0.98r3 some clarification for graphs on likelihood contributions          * imach.c: *** empty log message ***
   
 2015-10-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2016-08-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Some new graphs of contribution to likelihood          * imach.c: Summary: Fixing a lots
   
 2015-09-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2016-08-29  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile:          * imach.c: Summary: gnuplot problem in Back projection to fix
         Summary: Version read from version.h, itself read with cmake  
           * imach.c: Summary: Better
         * imach.c: Summary: looking at better estimation of the hessian  
   2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         Also a better criteria for convergence to the period prevalence And  
         therefore adding the number of years needed to converge. (The          * imach.c:
         prevalence in any alive state shold sum to one          Summary: Improvement in Powell output in order to copy and paste
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Starting tests of 0.99
   
 2015-09-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: to valgrind
   
         * imach.c:  2016-08-25  Brouard Nicolas  <brouard@ined.fr>
         Summary: Adding some overall graph on contribution to likelihood. Might change  
           * imach.c: *** empty log message ***
 2015-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2016-08-23  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: *** empty log message ***
         * imach.c: Summary: 0.98r0  
           * imach.c: Summary: not working
         - Some new graphs like suvival functions  
         - Some bugs fixed like model=1+age+V2.  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
   
         * ChangeLog, Makefile: Summary: 0.98r0          * imach.c: Summary: not working
   
         * CMakeLists.txt: Summary: Some tests for setup.iss          * imach.c: Summary: Not working
   
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  2016-07-23  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc          * imach.c: Summary: Completing for func too
   
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  2016-07-22  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.          * imach.c: Summary: Fixing some arrays, still debugging
   
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  2016-07-21  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)          * imach.c:
           Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>  
   2016-07-12  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Merging 1.61 to 1.162  
           * imach.c: Summary: temp
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  
           * imach.c: Summary: saving but not running
         * prevlim.h (Module):  
   2016-07-01  Brouard Nicolas  <brouard@ined.fr>
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>  
           * imach.c: Summary: Fixes
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...  
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  2016-02-19  Brouard Nicolas  <brouard@ined.fr>
   
 2010-04-29  brouard  <brouard@ined.fr>          * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
   
         * imach.c (Module): Checking covariates for more complex models          * setup.iss, Makefile, version.h: *** empty log message ***
         than V1+V2. A lot of change to be done. Unstable.  
           * imach.c: Summary: temporary
 2010-04-26  brouard  <brouard@ined.fr>  
   2016-02-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): merging some libgsl code. Fixing computation  
         of likelione (using inter/intrapolation if mle = 0) in order to          * imach.c: Summary: Probably last 0.98 stable version 0.98r6
         get same likelihood as if mle=1.  
         Some cleaning of code and comments added.  2016-02-16  Brouard Nicolas  <brouard@ined.fr>
   
 2009-10-29  brouard  <brouard@ined.fr>          * imach.c: Summary: minor bug
   
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.          * imach.c: Summary: 0.99r2
   
 2006-06-30  Brouard Nicolas  <brouard@localhost>  2016-02-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Clarifications on computing e.j          * imach.c: *** empty log message ***
   
 2006-04-28  Brouard Nicolas  <brouard@localhost>  2016-02-12  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Yes the sum of survivors was wrong since          * imach.c: Summary: 0.99 Back projections
         imach-114 because nhstepm was no more computed in the age  
         loop. Now we define nhstepma in the age loop.  2015-12-23  Brouard Nicolas  <brouard@ined.fr>
         (Module): In order to speed up (in case of numerous covariates) we  
         compute health expectancies (without variances) in a first step          * imach.c: Summary: Experimental backcast
         and then all the health expectancies with variances or standard  
         deviation (needs data from the Hessian matrices) which slows the  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
         computation.  
         In the future we should be able to stop the program is only health          * imach.c: Summary: 0.98r4 Warning and status=-2
         expectancies and graph are needed without standard deviations.  
           Version 0.98r4 is now:
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>           - displaying an error when status is -1, date of interview unknown and date of death known;
            - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         * imach.iss (Module):          Older changes concerning s=-2, dating from 2005 have been supersed.
   
         * imach.c (Module): bugs in evsi + population file added in htm output file          * Makefile: *** empty log message ***
   
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module):          * Makefile: *** empty log message ***
   
 2006-03-20  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: 0.98r4 working
   
         * imach.c (Module): <title> changed, corresponds to .htm file          * Makefile: Summary: linuxrpm added
         name. <head> headers where missing.  
           * Makefile: *** empty log message ***
         * Makefile (Module): 0.98g  
           * imach.c: Summary: temporary not working
         * imach.c (Module): Weights can have a decimal point as for  
         English (a comma might work with a correct LC_NUMERIC environment,  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
         otherwise the weight is truncated).  
         Modification of warning when the covariates values are not 0 or          * imach.c: Summary: 0.98r4
         1.  
         Version 0.98g  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * Makefile: *** empty log message ***
   
         * imach.c (Module): Comments concerning covariates added  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
   
         * noreg-setup.iss (Module): Version 0.98f          * Makefile:
           Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup  
           * imach.c: Summary: minor typo
         * imach.c (Module): refinements in the computation of lli if  
         status=-2 in order to have more reliable computation if stepm is          * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
         not 1 month. Version 0.98f  
           Author: Nicolas Brouard
 2006-03-15  Brouard Nicolas  <brouard@localhost>  
   2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Bug if status = -2, the loglikelihood was  
         computed as likelihood omitting the logarithm. Version O.98e          * imach.c: Summary: Start working on projected prevalences
   
 2006-03-14  Brouard Nicolas  <brouard@localhost>  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): varevsij Comments added explaining the second          * imach.c: Summary: Adding ftolpl parameter
         table of variances if popbased=1 .          Author: N Brouard
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  
         (Module): Function pstamp added          We had difficulties to get smoothed confidence intervals. It was due
         (Module): Version 0.98d          to the period prevalence which wasn't computed accurately. The inner
           parameter ftolpl is now an outer parameter of the .imach parameter
 2006-03-06  Brouard Nicolas  <brouard@localhost>          file after estepm. If ftolpl is small 1.e-4 and estepm too,
           computation are long.
         * imach.c (Module): Variance-covariance wrong links and  
         varian-covariance of ej. is needed (Saito).          * version.h: *** empty log message ***
   
 2006-02-27  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: temporary
   
         * imach.c (Module): One freematrix added in mlikeli!  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-26  Brouard Nicolas  <brouard@localhost>          * Makefile: *** empty log message ***
   
         * imach.c (Module): Some improvements in processing parameter          * setup.iss.in: Summary: some new subdirs
         filename with strsep.  
           * imach.c: *** empty log message ***
 2006-02-24  Brouard Nicolas  <brouard@localhost>  
           * setup.iss.in:
         * imach.c (Module): Memory leaks checks with valgrind and:          Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         datafile was not closed, some imatrix were not freed and on matrix  
         allocation too.  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: *** empty log message ***
   
         * strsep.c (Module): Inclusion because not in mingw32!!!  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in (Module): IMACHSETUPVERSION added          * imach.c:
           Summary: 0.98r3 some clarification for graphs on likelihood contributions
         * noreg-setup.iss (Module): added to cvs tree  
   2015-10-01  Brouard Nicolas  <brouard@ined.fr>
         * Makefile (Module): IMACHSETUPVERSION added  
           * imach.c: Summary: Some new graphs of contribution to likelihood
 2006-01-30  BROUARD Nicolas  <brouard@localhost>  
   2015-09-30  Brouard Nicolas  <brouard@ined.fr>
         * Makefile (Module, Module): Latest Makefile  
           * Makefile:
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe          Summary: Version read from version.h, itself read with cmake
   
 2006-01-27  BROUARD Nicolas  <brouard@localhost>          * imach.c: Summary: looking at better estimation of the hessian
   
         * noreg-setup.iss (Module): ADDED          Also a better criteria for convergence to the period prevalence And
           therefore adding the number of years needed to converge. (The
 2006-01-24  BROUARD Nicolas  <brouard@localhost>          prevalence in any alive state shold sum to one
   
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          * Makefile: *** empty log message ***
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  2015-09-22  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          * imach.c:
           Summary: Adding some overall graph on contribution to likelihood. Might change
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  
   2015-09-15  Brouard Nicolas  <brouard@ined.fr>
 2005-09-30    <lievre@PC_00595>  
           * Makefile: *** empty log message ***
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  
         (Module): If the status is missing at the last wave but we know          * imach.c: Summary: 0.98r0
         that the person is alive, then we can code his/her status as -2  
         (instead of missing=-1 in earlier versions) and his/her          - Some new graphs like survival functions
         contributions to the likelihood is 1 - Prob of dying from last          - Some bugs fixed like model=1+age+V2.
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  
         the healthy state at last known wave). Version is 0.98          * ChangeLog, Makefile: Summary: 0.98r0
   
 2004-05-20  Brouard Nicolas  <brouard@localhost>          * CMakeLists.txt: Summary: Some tests for setup.iss
   
         * imach.c (Repository):  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         Agnes added a direct estimation of mortality (without the need of  
         computing period prevalence and differential mortality). Thus here          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
         is version 0.97a which has been distributed to some people at  
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
         mortality using covariates is not done today. Estimating direct  
         mortality is a very different process because it doesn't need          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
         interpolation because it is easy to get the lx from the force of  
         the mortality mux in the simplest case as for a Gompertz (log mux  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         = a + b*x . But we have been able to incorporate the new code  
         within former imach program (0.96d) without deteriorating too much          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
         the understanding of the program.  
   2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
 2003-06-25    <brouard@BROUARD>  
           * imach.c (Module): Merging 1.61 to 1.162
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  
         exist so I changed back to asctime which exists.  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         (Module): Version 0.96b  
           * prevlim.h (Module): 
 2003-06-24    <brouard@BROUARD>  
   2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
         * imach.c (Module): Some bugs corrected for windows. Also, when  
         mle=-1 a template is output in file "or"mypar.txt with the design          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
         of the covariance matrix to be input.          (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
   
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  2010-04-29  brouard  <brouard@ined.fr>
   
         * imach.c (Repository): Duplicated warning errors corrected.          * imach.c (Module): Checking covariates for more complex models
         (Repository): Elapsed time after each iteration is now output. It          than V1+V2. A lot of change to be done. Unstable.
         helps to forecast when convergence will be reached. Elapsed time  
         is stamped in powell.  We created a new html file for the graphs  2010-04-26  brouard  <brouard@ined.fr>
         concerning matrix of covariance. It has extension -cov.htm.  
           * imach.c (Module): merging some libgsl code. Fixing computation
 2003-06-23  Brouard Nicolas  <brouard@homebrou>          of likelione (using inter/intrapolation if mle = 0) in order to
           get same likelihood as if mle=1.
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.          Some cleaning of code and comments added.
   
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  2009-10-29  brouard  <brouard@ined.fr>
   
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
   
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  2006-06-30  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Clarifications on computing e.j
         * imach.c (Repository): Check when date of death was earlier that  
         current date of interview. It may happen when the death was just  2006-04-28  Brouard Nicolas  <brouard@localhost>
         prior to the death. In this case, dh was negative and likelihood  
         was wrong (infinity). We still send an "Error" but patch by          * imach.c (Module): Yes the sum of survivors was wrong since
         assuming that the date of death was just one stepm after the          imach-114 because nhstepm was no more computed in the age
         interview.          loop. Now we define nhstepma in the age loop.
         (Repository): Because some people have very long ID (first column)          (Module): In order to speed up (in case of numerous covariates) we
         we changed int to long in num[] and we added a new lvector for          compute health expectancies (without variances) in a first step
         memory allocation. But we also truncated to 8 characters (left          and then all the health expectancies with variances or standard
         truncation)          deviation (needs data from the Hessian matrices) which slows the
           computation.
         (Repository): No more line truncation errors.          In the future we should be able to stop the program is only health
           expectancies and graph are needed without standard deviations.
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  
   2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         * imach.c (Repository): Add of a routine likelione (likelihood  
         only once) which prints on a text file          * imach.iss (Module): 
         (ilk) the contributions to the likelihood for each  
         individual/wave.          * imach.c (Module): bugs in evsi + population file added in htm output file
   
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         * imach.c (Repository): Replace "freqsummary" at a correct  
         place. It differs from routine "prevalence" which may be called          * imach.c (Module): 
         many times. Probs is memory consuming and must be used with  
         parcimony.  2006-03-20  Brouard Nicolas  <brouard@localhost>
   
 2003-06-17    <brouard@BROUARD>          * imach.c (Module): <title> changed, corresponds to .htm file
           name. <head> headers where missing.
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.          * Makefile (Module): 0.98g
   
 2003-05-16  Brouard Nicolas  <brouard@brouard>          * imach.c (Module): Weights can have a decimal point as for
         * imach.c (Module): Insert of a warning if the delay between two          English (a comma might work with a correct LC_NUMERIC environment,
         waves is negative.          otherwise the weight is truncated).
           Modification of warning when the covariates values are not 0 or
         * imach.c (Module):          1. 
           Version 0.98g
 2003-05-03    <brouard@BROUARD>  
   2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         * imach.c: Some cleaning  
           * imach.c (Module): Comments concerning covariates added
 2003-03-28    <brouard@BROUARD>  
         * imach.c (Module): In version up to 0.92 likelihood was computed          * noreg-setup.iss (Module): Version 0.98f
         as if date of death was unknown. Death was treated as any other  
         health state: the date of the interview describes the actual state          * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
         and not the date of a change in health state. The former idea was  
         to consider that at each interview the state was recorded          * imach.c (Module): refinements in the computation of lli if
         (healthy, disable or death) and IMaCh was corrected; but when we          status=-2 in order to have more reliable computation if stepm is
         introduced the exact date of death then we should have modified          not 1 month. Version 0.98f
         the contribution of an exact death to the likelihood. This new  
         contribution is smaller and very dependent of the step unit  2006-03-15  Brouard Nicolas  <brouard@localhost>
         stepm. It is no more the probability to die between last interview  
         and month of death but the probability to survive from last          * imach.c (Module): Bug if status = -2, the loglikelihood was
         interview up to one month before death multiplied by the          computed as likelihood omitting the logarithm. Version O.98e
         probability to die within a month. Thanks to Chris  
         Jackson for correcting this bug.  Former versions increased  2006-03-14  Brouard Nicolas  <brouard@localhost>
         mortality artificially. The bad side is that we add another loop  
           * imach.c (Module): varevsij Comments added explaining the second
           table of variances if popbased=1 .
         which slows down the processing. The difference can be up to 10%          (Module): Covariances of eij, ekl added, graphs fixed, new html link.
           (Module): Function pstamp added
           (Module): Version 0.98d 
         lower mortality.  
   2006-03-06  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Variance-covariance wrong links and
           varian-covariance of ej. is needed (Saito).
   
 2002-05-30    <brouard@BROUARD>  2006-02-27  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): One freematrix added in mlikeli!
   
   2006-02-26  Brouard Nicolas  <brouard@localhost>
   
         *          * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
   
   2006-02-24  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Memory leaks checks with valgrind and:
         * imach.c (Module): Add correlation matrix of one-step          datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
   
         probabilities and covariance matrix  2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
   
           * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   
Removed from v.1.40  
changed lines
  Added in v.1.65

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