Diff for /imach/src/ChangeLog between versions 1.41 and 1.65

version 1.41, 2021/02/11 19:49:33 version 1.65, 2023/05/08 17:46:42
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 2021-02-11  Nicolas J Brouard   <nbrouard@mac02049.local>  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
   
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.          * imach.c (Module): Inverting the model equation and fixingg bugs
           in the drawings
 2020-02-22  Brouard Nicolas  <brouard@brouard.name>          "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
   
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy  2023-04-24  Nicolas Brouard  <brouard@ined.fr>
         and life table from the data without any state)  
           * imach.c (Module): some bugs in printinggnuplot 
 2019-05-20  Brouard Nicolas  <brouard@brouard.name>  
   2022-09-19  Nicolas Brouard   <brouard@ined.fr>
         * version.h: Summary: version 0.99.r19  
           * imach.c (Module): Version 0.99r42 needed a newer version of
         * imach.c: Summary: Projection syntax simplified          Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         We can now start projections, forward or backward, from the mean date          version 5.0 or 5.1 distributed with IMaCh.
         of inteviews up to or down to a number of years of projection:  
         prevforecast=1 yearsfproj=15.3 mobil_average=0  2022-09-18  Nicolas Brouard   <brouard@ined.fr>
         or  
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0          * imach.c (Module): Fixing when a state in the data is 0 or higher
         or          than lstate+ndeath. Fixing the plot of contribution to Likelihood.
         prevbackcast=1 yearsbproj=12.3 mobil_average=1  
         or  2022-09-16  Nicolas Brouard   <brouard@ined.fr>
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1  
           * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
 2019-05-18  Brouard Nicolas  <brouard@brouard.name>  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: doxygen tex bug  
           * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
 2019-05-16  Brouard Nicolas  <brouard@brouard.name>  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: There was some wrong lines added  
           * imach.c (Module): Version 0.99r39 with colored dummy covariates
 2019-05-09  Brouard Nicolas  <brouard@brouard.name>          (fixed or time varying), using new last columns of
           ILK_parameter.txt file.
         * Makefile, imach.c: *** empty log message ***  
   2022-09-11  Nicolas Brouard   <brouard@ined.fr>
         * ChangeLog: Summary: C=  
           * imach.c (Module): Adding timevarying products of any kinds,
         * imach.c: Summary: Some updates          should work before shifting cotvar from ncovcol+nqv columns in
           order to have a correspondance between the column of cotvar and
         * imach.c: Summary: Before ncovmax          the id of column.
           (Module): Some cleaning and adding covariates in ILK.txt
         * version.h: *** empty log message ***  
   2022-09-09  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: 0.99r18 unlimited number of individuals  
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.          * imach.c (Module): Many improvements for fixing products of fixed
           timevarying as well as fixed * fixed, and test with quantitative
 2018-12-13  Brouard Nicolas  <brouard@brouard.name>          covariate.
   
         * imach.c: Summary: Bug for young ages (<-30) will be in r17  2022-09-04  Nicolas Brouard   <brouard@ined.fr>
   
 2018-12-05  Brouard Nicolas  <brouard@brouard.name>          * imach.c (Module): Now the easy runs i.e. without result or
           model=1+age only did not work. The defautl combination should be 1
         * Makefile: Summary: 0.99r16          and not 0 because everything hasn't been tranformed yet.
   
 2018-05-02  Brouard Nicolas  <brouard@brouard.name>  2022-09-02  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed          * imach.c: Version 0.99r35 because it outputs same results with
           1+age+V1+V1*age for females and 1+age for females only
 2018-05-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          (education=1 noweight)
   
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17  2022-08-31  Nicolas Brouard   <brouard@ined.fr>
   
 2018-05-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
   
         * imach.c: Summary: Some bugs fixed  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
   
 2018-05-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Version 0.99r33 A lot of changes in
           reassigning covariates: my first idea was that people will always
         * imach.c:          use the first covariate V1 into the model but in fact they are
         Summary: Bug fixed by providing frequencies only for non missing covariates          producing data with many covariates and can use an equation model
           with some of the covariate; it means that in a model V2+V3 instead
 2018-04-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          of codtabm(k,Tvaraff[j]) which calculates for combination k, for
           three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         * imach.c: Summary: some minor bugs          the equation model is restricted to two variables only (V2, V3)
           and the combination for V2 should be codtabm(k,1) instead of
 2018-04-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          (codtabm(k,2), and the code should be
           codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
         * README.txt: *** empty log message ***          made. All of these should be simplified once a day like we did in
           hpxij() for example by using precov[nres] which is computed in
         * imach.c: Summary: Some bugs fixed, valgrind tested          decoderesult for each nres of each resultline. Loop should be done
           on the equation model globally by distinguishing only product with
 2018-04-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          age (which are changing with age) and no more on type of
           covariates, single dummies, single covariates. 
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  
   2022-08-06  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  
         Summary: Computing mean and stdeviation of fixed quantitative variables          *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
   
 2018-04-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-08-03  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some minor bugs fixed          *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
   
         * version.h: *** empty log message ***  2022-07-25  Brouard Nicolas  <brouard@brouard.name>
   
 2018-02-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Error cptcovn instead of nsd in bmij (was
           coredumped, revealed by Feiuno, thank you.
         * imach.c: *** empty log message ***  
   2022-07-23  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Adding second argument for quitting  
           * r29 W and not sqrt(Wald)
 2018-02-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-07-22  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, README.txt, imach.c: Summary: 0.99r15  
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
   
 2017-07-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-06-02  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: temporary working          * imach.c (Module): Adding the Wald tests from the log to the main
           htm for better display of the maximum likelihood estimators.
 2017-07-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-05-30  Brouard Nicolas  <brouard@brouard.name>
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)  
           * imach.c: With products of covariates (age or dummies or
 2017-07-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          quantitatives), estimates of parameters were good but when
           estimating variances the positions of newly created covariates
         * imach.c: Summary: BOM files can be read now          were wrongly assigned and results were wrong. Thank to Feinua_Sun!
   
 2017-06-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-05-24  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Graphs improvements          * imach.c (Module): Some attempts to find a bug of wrong estimates
           of confidencce intervals with product in the equation modelC
         * imach.c: Summary: Saito's color  
   2022-05-15  Nicolas Brouard   <brouard@ined.fr>
 2017-06-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module):  Some minor improvements
         * imach.c: Summary: Version 0.99r14  
   2022-04-13  Brouard Nicolas  <brouard@brouard.name>
 2017-06-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Adding link to text data files
         * imach.c: Summary: More documentation on projections  
   2022-04-11  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)  
           * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
         * imach.c: Summary: Some bug with rint  
   2022-04-05  Brouard Nicolas  <brouard@ined.fr>
 2017-05-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Fixed covariates (dummy or quantitative)
         * imach.c: *** empty log message ***          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
 2017-05-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
         * imach.c: Summary: Code into subroutine, cleanings  
   2022-03-17  Brouard Nicolas  <brouard@ined.fr>
 2017-05-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * 99r25 Improvements in fixing discrepancies between covariates
         * imach.c:          missing in result line but in model. 
         Summary: backprojection and confidence intervals of backprevalence  
   *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
 2017-05-13  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
   
         * imach.c: Summary: temporary save for backprojection  *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)          * ./ (Module): Fixed bug on result:
   
 2017-04-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          * imach.c (Module): Fix bug on quitting after result lines!
           (Module): Version 0.99r21
         * imach.c: Summary: Labels in graphs  
   2021-02-12  Nicolas Brouard   <brouard@ined.fr>
 2017-04-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): The use of a Windows BOM (huge) file is now an error
         * imach.c: Summary: to save  
   
 2017-04-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
   
 2017-04-05  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2020-02-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1          *  (Module): imach.c Update mle=-3 (for computing Life expectancy
           and life table from the data without any state)
 2017-04-04  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2019-05-20  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Gnuplot indexations fixed (humm)  
           * version.h: Summary: version 0.99.r19
         * imach.c:  
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3          * imach.c: Summary: Projection syntax simplified
           We can now start projections, forward or backward, from the mean date
 2017-04-03  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          of inteviews up to or down to a number of years of projection:
           prevforecast=1 yearsfproj=15.3 mobil_average=0
         * imach.c: Summary: Version 0.99r12          or
         Some cleanings, conformed with updated documentation.          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
           or
 2017-03-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
         * version.h: *** empty log message ***          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   
         * version.h: Summary:0.99r11  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
 2017-03-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: doxygen tex bug
   
         * imach.c: Summary: Temp  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
 2017-03-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: There was some wrong lines added
   
         * imach.c: Summary: Temporary  2019-05-09  Brouard Nicolas  <brouard@ined.fr>
   
 2017-03-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * Makefile, imach.c: *** empty log message ***
   
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed          * ChangeLog: Summary: C=
   
         * imach.c: Summary: Fixing data parameter line          * imach.c: Summary: Some updates
   
 2016-12-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Before ncovmax
   
         * imach.c: Summary: 0.99 in progress          * version.h: *** empty log message ***
   
 2016-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: 0.99r18 unlimited number of individuals
           The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
         * imach.c: *** empty log message ***  
   2018-12-13  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: not working  
           * imach.c: Summary: Bug for young ages (<-30) will be in r17
 2016-09-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2018-12-05  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: continue  
           * Makefile: Summary: 0.99r16
 2016-09-07  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Starting values from frequencies  
           * imach.c: Summary: Some bugs fixed
         * imach.c: *** empty log message ***  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2016-09-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c:  Summary: Bug for young ages (<-30) will be in r17
         * imach.c: *** empty log message ***  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2016-08-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Some bugs fixed
         * imach.c: Summary: Fixing a lots  
   2018-05-01  Brouard Nicolas  <brouard@ined.fr>
 2016-08-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c:
         * imach.c: Summary: gnuplot problem in Back projection to fix          Summary: Bug fixed by providing frequencies only for non missing covariates
   
         * imach.c: Summary: Better  2018-04-27  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: some minor bugs
   
         * imach.c:  2018-04-21  Brouard Nicolas  <brouard@ined.fr>
         Summary: Improvement in Powell output in order to copy and paste  
           * README.txt: *** empty log message ***
         * imach.c: Summary: Starting tests of 0.99  
           * imach.c: Summary: Some bugs fixed, valgrind tested
         * imach.c: Summary: to valgrind  
   2018-04-20  Brouard Nicolas  <brouard@ined.fr>
 2016-08-25  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
         * imach.c: *** empty log message ***  
           * imach.c:
 2016-08-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          Summary: Computing mean and stdeviation of fixed quantitative variables
   
         * imach.c: *** empty log message ***  2018-04-19  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * imach.c: Summary: Some minor bugs fixed
   
 2016-08-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * version.h: *** empty log message ***
   
         * imach.c: Summary: not working  2018-02-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Not working          * imach.c: *** empty log message ***
   
 2016-07-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Adding second argument for quitting
   
         * imach.c: Summary: Completing for func too  2018-02-21  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * Makefile, README.txt, imach.c: Summary: 0.99r15
           New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
         * imach.c: Summary: Fixing some arrays, still debugging  
   2017-07-20  Brouard Nicolas  <brouard@ined.fr>
 2016-07-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: temporary working
         * imach.c:  
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  2017-07-19  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
   
         * imach.c: Summary: temp  2017-07-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: saving but not running          * imach.c: Summary: BOM files can be read now
   
 2016-07-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-06-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixes          * imach.c: Summary: Graphs improvements
   
 2016-02-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Saito's color
   
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  2017-06-29  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss, Makefile, version.h: *** empty log message ***          * imach.c: Summary: Version 0.99r14
   
         * imach.c: Summary: temporary  2017-06-27  Brouard Nicolas  <brouard@ined.fr>
   
 2016-02-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: More documentation on projections
   
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6          * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
   
 2016-02-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Some bug with rint
   
         * imach.c: Summary: minor bug  2017-05-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99r2          * imach.c: *** empty log message ***
   
 2016-02-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-05-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Code into subroutine, cleanings
   
 2016-02-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-05-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99 Back projections          * imach.c:
           Summary: backprojection and confidence intervals of backprevalence
 2015-12-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-05-13  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Experimental backcast  
           * imach.c: Summary: temporary save for backprojection
 2015-12-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
         * imach.c: Summary: 0.98r4 Warning and status=-2  
   2017-04-26  Brouard Nicolas  <brouard@ined.fr>
         Version 0.98r4 is now:  
          - displaying an error when status is -1, date of interview unknown and date of death known;          * imach.c: Summary: imach 0.99r13 Some bugs fixed
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.          * imach.c: Summary: Labels in graphs
   
         * Makefile: *** empty log message ***  2017-04-24  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: to save
   
         * Makefile: *** empty log message ***  2017-04-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4 working          * imach.c: *** empty log message ***
   
         * Makefile: Summary: linuxrpm added  2017-04-05  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
   
         * imach.c: Summary: temporary not working  2017-04-04  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-11  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Gnuplot indexations fixed (humm)
   
         * imach.c: Summary: 0.98r4          * imach.c:
           Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
 2015-12-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-04-03  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: Version 0.99r12
 2015-11-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          Some cleanings, conformed with updated documentation.
   
         * Makefile:  2017-03-30  Brouard Nicolas  <brouard@ined.fr>
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  
           * version.h: *** empty log message ***
         * imach.c: Summary: minor typo  
           * version.h: Summary:0.99r11
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
   2017-03-29  Brouard Nicolas  <brouard@ined.fr>
         Author: Nicolas Brouard  
           * imach.c: Summary: Temp
 2015-11-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-03-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Start working on projected prevalences  
           * imach.c: Summary: Temporary
 2015-11-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-03-08  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Adding ftolpl parameter  
         Author: N Brouard          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
   
         We had difficulties to get smoothed confidence intervals. It was due          * imach.c: Summary: Fixing data parameter line
         to the period prevalence which wasn't computed accurately. The inner  
         parameter ftolpl is now an outer parameter of the .imach parameter  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
         file after estepm. If ftolpl is small 1.e-4 and estepm too,  
         computation are long.          * imach.c: Summary: 0.99 in progress
   
         * version.h: *** empty log message ***  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temporary          * imach.c: *** empty log message ***
   
 2015-10-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: not working
   
         * Makefile: *** empty log message ***  2016-09-08  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in: Summary: some new subdirs          * imach.c: Summary: continue
   
         * imach.c: *** empty log message ***  2016-09-07  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in:          * imach.c: Summary: Starting values from frequencies
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  
           * imach.c: *** empty log message ***
 2015-10-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2016-09-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: *** empty log message ***
 2015-10-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2016-08-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: 0.98r3 some clarification for graphs on likelihood contributions          * imach.c: Summary: Fixing a lots
   
 2015-10-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2016-08-29  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Some new graphs of contribution to likelihood          * imach.c: Summary: gnuplot problem in Back projection to fix
   
 2015-09-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Better
   
         * Makefile:  2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         Summary: Version read from version.h, itself read with cmake  
           * imach.c:
         * imach.c: Summary: looking at better estimation of the hessian          Summary: Improvement in Powell output in order to copy and paste
   
         Also a better criteria for convergence to the period prevalence And          * imach.c: Summary: Starting tests of 0.99
         therefore adding the number of years needed to converge. (The  
         prevalence in any alive state shold sum to one          * imach.c: Summary: to valgrind
   
         * Makefile: *** empty log message ***  2016-08-25  Brouard Nicolas  <brouard@ined.fr>
   
 2015-09-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: *** empty log message ***
   
         * imach.c:  2016-08-23  Brouard Nicolas  <brouard@ined.fr>
         Summary: Adding some overall graph on contribution to likelihood. Might change  
           * imach.c: *** empty log message ***
 2015-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: not working
         * Makefile: *** empty log message ***  
   2016-08-22  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r0  
           * imach.c: Summary: not working
         - Some new graphs like suvival functions  
         - Some bugs fixed like model=1+age+V2.          * imach.c: Summary: Not working
   
         * ChangeLog, Makefile: Summary: 0.98r0  2016-07-23  Brouard Nicolas  <brouard@ined.fr>
   
         * CMakeLists.txt: Summary: Some tests for setup.iss          * imach.c: Summary: Completing for func too
   
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  2016-07-22  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc          * imach.c: Summary: Fixing some arrays, still debugging
   
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  2016-07-21  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.          * imach.c:
           Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
   2016-07-12  Brouard Nicolas  <brouard@ined.fr>
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  
           * imach.c: Summary: temp
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>  
           * imach.c: Summary: saving but not running
         * imach.c (Module): Merging 1.61 to 1.162  
   2016-07-01  Brouard Nicolas  <brouard@ined.fr>
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  
           * imach.c: Summary: Fixes
         * prevlim.h (Module):  
   2016-02-19  Brouard Nicolas  <brouard@ined.fr>
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>  
           * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...  
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.          * setup.iss, Makefile, version.h: *** empty log message ***
   
 2010-04-29  brouard  <brouard@ined.fr>          * imach.c: Summary: temporary
   
         * imach.c (Module): Checking covariates for more complex models  2016-02-17  Brouard Nicolas  <brouard@ined.fr>
         than V1+V2. A lot of change to be done. Unstable.  
           * imach.c: Summary: Probably last 0.98 stable version 0.98r6
 2010-04-26  brouard  <brouard@ined.fr>  
   2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): merging some libgsl code. Fixing computation  
         of likelione (using inter/intrapolation if mle = 0) in order to          * imach.c: Summary: minor bug
         get same likelihood as if mle=1.  
         Some cleaning of code and comments added.          * imach.c: Summary: 0.99r2
   
 2009-10-29  brouard  <brouard@ined.fr>  2016-02-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.          * imach.c: *** empty log message ***
   
 2006-06-30  Brouard Nicolas  <brouard@localhost>  2016-02-12  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Clarifications on computing e.j          * imach.c: Summary: 0.99 Back projections
   
 2006-04-28  Brouard Nicolas  <brouard@localhost>  2015-12-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Yes the sum of survivors was wrong since          * imach.c: Summary: Experimental backcast
         imach-114 because nhstepm was no more computed in the age  
         loop. Now we define nhstepma in the age loop.  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
         (Module): In order to speed up (in case of numerous covariates) we  
         compute health expectancies (without variances) in a first step          * imach.c: Summary: 0.98r4 Warning and status=-2
         and then all the health expectancies with variances or standard  
         deviation (needs data from the Hessian matrices) which slows the          Version 0.98r4 is now:
         computation.           - displaying an error when status is -1, date of interview unknown and date of death known;
         In the future we should be able to stop the program is only health           - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         expectancies and graph are needed without standard deviations.          Older changes concerning s=-2, dating from 2005 have been supersed.
   
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * Makefile: *** empty log message ***
   
         * imach.iss (Module):  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): bugs in evsi + population file added in htm output file          * Makefile: *** empty log message ***
   
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: 0.98r4 working
   
         * imach.c (Module):          * Makefile: Summary: linuxrpm added
   
 2006-03-20  Brouard Nicolas  <brouard@localhost>          * Makefile: *** empty log message ***
   
         * imach.c (Module): <title> changed, corresponds to .htm file          * imach.c: Summary: temporary not working
         name. <head> headers where missing.  
   2015-12-11  Brouard Nicolas  <brouard@ined.fr>
         * Makefile (Module): 0.98g  
           * imach.c: Summary: 0.98r4
         * imach.c (Module): Weights can have a decimal point as for  
         English (a comma might work with a correct LC_NUMERIC environment,  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
         otherwise the weight is truncated).  
         Modification of warning when the covariates values are not 0 or          * Makefile: *** empty log message ***
         1.  
         Version 0.98g  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * Makefile:
           Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         * imach.c (Module): Comments concerning covariates added  
           * imach.c: Summary: minor typo
         * noreg-setup.iss (Module): Version 0.98f  
           * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup  
           Author: Nicolas Brouard
         * imach.c (Module): refinements in the computation of lli if  
         status=-2 in order to have more reliable computation if stepm is  2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         not 1 month. Version 0.98f  
           * imach.c: Summary: Start working on projected prevalences
 2006-03-15  Brouard Nicolas  <brouard@localhost>  
   2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Bug if status = -2, the loglikelihood was  
         computed as likelihood omitting the logarithm. Version O.98e          * imach.c: Summary: Adding ftolpl parameter
           Author: N Brouard
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
           We had difficulties to get smoothed confidence intervals. It was due
         * imach.c (Module): varevsij Comments added explaining the second          to the period prevalence which wasn't computed accurately. The inner
         table of variances if popbased=1 .          parameter ftolpl is now an outer parameter of the .imach parameter
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.          file after estepm. If ftolpl is small 1.e-4 and estepm too,
         (Module): Function pstamp added          computation are long.
         (Module): Version 0.98d  
           * version.h: *** empty log message ***
 2006-03-06  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: temporary
         * imach.c (Module): Variance-covariance wrong links and  
         varian-covariance of ej. is needed (Saito).  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-27  Brouard Nicolas  <brouard@localhost>          * Makefile: *** empty log message ***
   
         * imach.c (Module): One freematrix added in mlikeli!          * setup.iss.in: Summary: some new subdirs
   
 2006-02-26  Brouard Nicolas  <brouard@localhost>          * imach.c: *** empty log message ***
   
         * imach.c (Module): Some improvements in processing parameter          * setup.iss.in:
         filename with strsep.          Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
   
 2006-02-24  Brouard Nicolas  <brouard@localhost>  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Memory leaks checks with valgrind and:          * imach.c: *** empty log message ***
         datafile was not closed, some imatrix were not freed and on matrix  
         allocation too.  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c:
           Summary: 0.98r3 some clarification for graphs on likelihood contributions
         * strsep.c (Module): Inclusion because not in mingw32!!!  
   2015-10-01  Brouard Nicolas  <brouard@ined.fr>
         * setup.iss.in (Module): IMACHSETUPVERSION added  
           * imach.c: Summary: Some new graphs of contribution to likelihood
         * noreg-setup.iss (Module): added to cvs tree  
   2015-09-30  Brouard Nicolas  <brouard@ined.fr>
         * Makefile (Module): IMACHSETUPVERSION added  
           * Makefile:
 2006-01-30  BROUARD Nicolas  <brouard@localhost>          Summary: Version read from version.h, itself read with cmake
   
         * Makefile (Module, Module): Latest Makefile          * imach.c: Summary: looking at better estimation of the hessian
   
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe          Also a better criteria for convergence to the period prevalence And
           therefore adding the number of years needed to converge. (The
 2006-01-27  BROUARD Nicolas  <brouard@localhost>          prevalence in any alive state shold sum to one
   
         * noreg-setup.iss (Module): ADDED          * Makefile: *** empty log message ***
   
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  2015-09-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          * imach.c:
           Summary: Adding some overall graph on contribution to likelihood. Might change
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  
   2015-09-15  Brouard Nicolas  <brouard@ined.fr>
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg  
           * Makefile: *** empty log message ***
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  
           * imach.c: Summary: 0.98r0
 2005-09-30    <lievre@PC_00595>  
           - Some new graphs like survival functions
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.          - Some bugs fixed like model=1+age+V2.
         (Module): If the status is missing at the last wave but we know  
         that the person is alive, then we can code his/her status as -2          * ChangeLog, Makefile: Summary: 0.98r0
         (instead of missing=-1 in earlier versions) and his/her  
         contributions to the likelihood is 1 - Prob of dying from last          * CMakeLists.txt: Summary: Some tests for setup.iss
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  
         the healthy state at last known wave). Version is 0.98  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
 2004-05-20  Brouard Nicolas  <brouard@localhost>          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
   
         * imach.c (Repository):  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
         Agnes added a direct estimation of mortality (without the need of  
         computing period prevalence and differential mortality). Thus here          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
         is version 0.97a which has been distributed to some people at  
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         mortality using covariates is not done today. Estimating direct  
         mortality is a very different process because it doesn't need          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
         interpolation because it is easy to get the lx from the force of  
         the mortality mux in the simplest case as for a Gompertz (log mux  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
         = a + b*x . But we have been able to incorporate the new code  
         within former imach program (0.96d) without deteriorating too much          * imach.c (Module): Merging 1.61 to 1.162
         the understanding of the program.  
   2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
 2003-06-25    <brouard@BROUARD>  
           * prevlim.h (Module): 
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  
         exist so I changed back to asctime which exists.  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
         (Module): Version 0.96b  
           * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
 2003-06-24    <brouard@BROUARD>          (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
   
         * imach.c (Module): Some bugs corrected for windows. Also, when  2010-04-29  brouard  <brouard@ined.fr>
         mle=-1 a template is output in file "or"mypar.txt with the design  
         of the covariance matrix to be input.          * imach.c (Module): Checking covariates for more complex models
           than V1+V2. A lot of change to be done. Unstable.
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  
   2010-04-26  brouard  <brouard@ined.fr>
         * imach.c (Repository): Duplicated warning errors corrected.  
         (Repository): Elapsed time after each iteration is now output. It          * imach.c (Module): merging some libgsl code. Fixing computation
         helps to forecast when convergence will be reached. Elapsed time          of likelione (using inter/intrapolation if mle = 0) in order to
         is stamped in powell.  We created a new html file for the graphs          get same likelihood as if mle=1.
         concerning matrix of covariance. It has extension -cov.htm.          Some cleaning of code and comments added.
   
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  2009-10-29  brouard  <brouard@ined.fr>
   
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
   
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  2006-06-30  Brouard Nicolas  <brouard@localhost>
   
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96          * imach.c (Module): Clarifications on computing e.j
   
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  2006-04-28  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Yes the sum of survivors was wrong since
         * imach.c (Repository): Check when date of death was earlier that          imach-114 because nhstepm was no more computed in the age
         current date of interview. It may happen when the death was just          loop. Now we define nhstepma in the age loop.
         prior to the death. In this case, dh was negative and likelihood          (Module): In order to speed up (in case of numerous covariates) we
         was wrong (infinity). We still send an "Error" but patch by          compute health expectancies (without variances) in a first step
         assuming that the date of death was just one stepm after the          and then all the health expectancies with variances or standard
         interview.          deviation (needs data from the Hessian matrices) which slows the
         (Repository): Because some people have very long ID (first column)          computation.
         we changed int to long in num[] and we added a new lvector for          In the future we should be able to stop the program is only health
         memory allocation. But we also truncated to 8 characters (left          expectancies and graph are needed without standard deviations.
         truncation)  
   2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         (Repository): No more line truncation errors.  
           * imach.iss (Module): 
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): bugs in evsi + population file added in htm output file
         * imach.c (Repository): Add of a routine likelione (likelihood  
         only once) which prints on a text file  2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         (ilk) the contributions to the likelihood for each  
         individual/wave.          * imach.c (Module): 
   
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  2006-03-20  Brouard Nicolas  <brouard@localhost>
         * imach.c (Repository): Replace "freqsummary" at a correct  
         place. It differs from routine "prevalence" which may be called          * imach.c (Module): <title> changed, corresponds to .htm file
         many times. Probs is memory consuming and must be used with          name. <head> headers where missing.
         parcimony.  
           * Makefile (Module): 0.98g
 2003-06-17    <brouard@BROUARD>  
           * imach.c (Module): Weights can have a decimal point as for
         * timeval.h (Module): Added included file to make use of          English (a comma might work with a correct LC_NUMERIC environment,
         gettimeofday working on win32 with cygwin.          otherwise the weight is truncated).
           Modification of warning when the covariates values are not 0 or
 2003-05-16  Brouard Nicolas  <brouard@brouard>          1. 
         * imach.c (Module): Insert of a warning if the delay between two          Version 0.98g
         waves is negative.  
   2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         * imach.c (Module):  
           * imach.c (Module): Comments concerning covariates added
 2003-05-03    <brouard@BROUARD>  
           * noreg-setup.iss (Module): Version 0.98f
         * imach.c: Some cleaning  
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
 2003-03-28    <brouard@BROUARD>  
         * imach.c (Module): In version up to 0.92 likelihood was computed          * imach.c (Module): refinements in the computation of lli if
         as if date of death was unknown. Death was treated as any other          status=-2 in order to have more reliable computation if stepm is
         health state: the date of the interview describes the actual state          not 1 month. Version 0.98f
         and not the date of a change in health state. The former idea was  
         to consider that at each interview the state was recorded  2006-03-15  Brouard Nicolas  <brouard@localhost>
         (healthy, disable or death) and IMaCh was corrected; but when we  
         introduced the exact date of death then we should have modified          * imach.c (Module): Bug if status = -2, the loglikelihood was
         the contribution of an exact death to the likelihood. This new          computed as likelihood omitting the logarithm. Version O.98e
         contribution is smaller and very dependent of the step unit  
         stepm. It is no more the probability to die between last interview  2006-03-14  Brouard Nicolas  <brouard@localhost>
         and month of death but the probability to survive from last  
         interview up to one month before death multiplied by the          * imach.c (Module): varevsij Comments added explaining the second
         probability to die within a month. Thanks to Chris          table of variances if popbased=1 .
         Jackson for correcting this bug.  Former versions increased          (Module): Covariances of eij, ekl added, graphs fixed, new html link.
         mortality artificially. The bad side is that we add another loop          (Module): Function pstamp added
           (Module): Version 0.98d 
   
         which slows down the processing. The difference can be up to 10%  2006-03-06  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Variance-covariance wrong links and
         lower mortality.          varian-covariance of ej. is needed (Saito).
   
   2006-02-27  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): One freematrix added in mlikeli!
   
 2002-05-30    <brouard@BROUARD>  2006-02-26  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
   
   2006-02-24  Brouard Nicolas  <brouard@localhost>
         *  
           * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
   
   2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         * imach.c (Module): Add correlation matrix of one-step  
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
         probabilities and covariance matrix          * setup.iss.in (Module): IMACHSETUPVERSION added
   
           * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

Removed from v.1.41  
changed lines
  Added in v.1.65


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