Diff for /imach/src/ChangeLog between versions 1.44 and 1.67

version 1.44, 2021/02/20 15:45:47 version 1.67, 2023/05/23 12:25:36
Line 1 Line 1
 2021-02-20  Nicolas Brouard   <brouard@ined.fr>  2023-05-23  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): Fix bug on quitting after result lines!          * imach.c (Module): Fixed PROB_r 
         (Module): Version 0.99r21  
   2023-05-22  Nicolas Brouard   <brouard@ined.fr>
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>  
           * imach.c (Module): In the ILK....txt file, the number of columns
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error          before the covariates values is dependent of the number of states (16+nlstate): 0.99r46
   
   2023-05-08  Nicolas Brouard   <brouard@ined.fr>
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>  
           *  (Module): Error V0 when result:. and model 1+age+V1: fixed
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.  
   2023-04-29  Nicolas Brouard  <brouard@ined.fr>
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Inverting the model equation and fixingg bugs
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy          in the drawings
         and life table from the data without any state)          "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
   
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>  2023-04-24  Nicolas Brouard  <brouard@ined.fr>
   
         * version.h: Summary: version 0.99.r19          * imach.c (Module): some bugs in printinggnuplot 
   
         * imach.c: Summary: Projection syntax simplified  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
         We can now start projections, forward or backward, from the mean date  
         of inteviews up to or down to a number of years of projection:          * imach.c (Module): Version 0.99r42 needed a newer version of
         prevforecast=1 yearsfproj=15.3 mobil_average=0          Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         or          version 5.0 or 5.1 distributed with IMaCh.
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0  
         or  2022-09-18  Nicolas Brouard   <brouard@ined.fr>
         prevbackcast=1 yearsbproj=12.3 mobil_average=1  
         or          * imach.c (Module): Fixing when a state in the data is 0 or higher
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1          than lstate+ndeath. Fixing the plot of contribution to Likelihood.
   
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>  2022-09-16  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: doxygen tex bug          * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
   
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: There was some wrong lines added          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
   
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * Makefile, imach.c: *** empty log message ***          * imach.c (Module): Version 0.99r39 with colored dummy covariates
           (fixed or time varying), using new last columns of
         * ChangeLog: Summary: C=          ILK_parameter.txt file.
   
         * imach.c: Summary: Some updates  2022-09-11  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Before ncovmax          * imach.c (Module): Adding timevarying products of any kinds,
           should work before shifting cotvar from ncovcol+nqv columns in
         * version.h: *** empty log message ***          order to have a correspondance between the column of cotvar and
           the id of column.
         * imach.c: Summary: 0.99r18 unlimited number of individuals          (Module): Some cleaning and adding covariates in ILK.txt
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.  
   2022-09-09  Nicolas Brouard   <brouard@ined.fr>
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Many improvements for fixing products of fixed
         * imach.c: Summary: Bug for young ages (<-30) will be in r17          timevarying as well as fixed * fixed, and test with quantitative
           covariate.
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-04  Nicolas Brouard   <brouard@ined.fr>
         * Makefile: Summary: 0.99r16  
           * imach.c (Module): Now the easy runs i.e. without result or
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          model=1+age only did not work. The defautl combination should be 1
           and not 0 because everything hasn't been tranformed yet.
         * imach.c: Summary: Some bugs fixed  
   2022-09-02  Nicolas Brouard   <brouard@ined.fr>
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Version 0.99r35 because it outputs same results with
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17          1+age+V1+V1*age for females and 1+age for females only
           (education=1 noweight)
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  
   2022-08-31  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some bugs fixed  
           * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>  
   2022-08-21  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  
         Summary: Bug fixed by providing frequencies only for non missing covariates          * imach.c (Module): Version 0.99r33 A lot of changes in
           reassigning covariates: my first idea was that people will always
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>          use the first covariate V1 into the model but in fact they are
           producing data with many covariates and can use an equation model
         * imach.c: Summary: some minor bugs          with some of the covariate; it means that in a model V2+V3 instead
           of codtabm(k,Tvaraff[j]) which calculates for combination k, for
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>          three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
           the equation model is restricted to two variables only (V2, V3)
         * README.txt: *** empty log message ***          and the combination for V2 should be codtabm(k,1) instead of
           (codtabm(k,2), and the code should be
         * imach.c: Summary: Some bugs fixed, valgrind tested          codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
           made. All of these should be simplified once a day like we did in
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>          hpxij() for example by using precov[nres] which is computed in
           decoderesult for each nres of each resultline. Loop should be done
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16          on the equation model globally by distinguishing only product with
           age (which are changing with age) and no more on type of
         * imach.c:          covariates, single dummies, single covariates. 
         Summary: Computing mean and stdeviation of fixed quantitative variables  
   2022-08-06  Nicolas Brouard   <brouard@ined.fr>
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>  
           *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
         * imach.c: Summary: Some minor bugs fixed  
   2022-08-03  Nicolas Brouard   <brouard@ined.fr>
         * version.h: *** empty log message ***  
           *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>  
   2022-07-25  Brouard Nicolas  <brouard@brouard.name>
         * imach.c: *** empty log message ***  
           * imach.c (Module): Error cptcovn instead of nsd in bmij (was
         * imach.c: Summary: Adding second argument for quitting          coredumped, revealed by Feiuno, thank you.
   
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
   
         * Makefile, README.txt, imach.c: Summary: 0.99r15          * r29 W and not sqrt(Wald)
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c  
   2022-07-22  Nicolas Brouard   <brouard@ined.fr>
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>  
           *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
         * imach.c: Summary: temporary working  
   2022-06-02  Brouard Nicolas  <brouard@brouard.name>
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Adding the Wald tests from the log to the main
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)          htm for better display of the maximum likelihood estimators.
   
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>  2022-05-30  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: BOM files can be read now          * imach.c: With products of covariates (age or dummies or
           quantitatives), estimates of parameters were good but when
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>          estimating variances the positions of newly created covariates
           were wrongly assigned and results were wrong. Thank to Feinua_Sun!
         * imach.c: Summary: Graphs improvements  
   2022-05-24  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Saito's color  
           * imach.c (Module): Some attempts to find a bug of wrong estimates
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>          of confidencce intervals with product in the equation modelC
   
         * imach.c: Summary: Version 0.99r14  2022-05-15  Nicolas Brouard   <brouard@ined.fr>
   
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module):  Some minor improvements
   
         * imach.c: Summary: More documentation on projections  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)          * imach.c (Module): Adding link to text data files
   
         * imach.c: Summary: Some bug with rint  2022-04-11  Nicolas Brouard   <brouard@ined.fr>
   
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
   
         * imach.c: *** empty log message ***  2022-04-05  Brouard Nicolas  <brouard@ined.fr>
   
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Fixed covariates (dummy or quantitative)
           with missing values have never been allowed but are ERRORS and
         * imach.c: Summary: Code into subroutine, cleanings          program quits. Standard deviations of fixed covariates were
           wrongly computed. Mean and standard deviations of time varying
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>          covariates are still not computed.
   
         * imach.c:  2022-03-17  Brouard Nicolas  <brouard@ined.fr>
         Summary: backprojection and confidence intervals of backprevalence  
           * 99r25 Improvements in fixing discrepancies between covariates
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>          missing in result line but in model. 
   
         * imach.c: Summary: temporary save for backprojection  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>  
           * ./ (Module): Fixed bug on result:
         * imach.c: Summary: imach 0.99r13 Some bugs fixed  
   *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Labels in graphs  
           * imach.c (Module): Fix bug on quitting after result lines!
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>          (Module): Version 0.99r21
   
         * imach.c: Summary: to save  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
   
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
   
         * imach.c: *** empty log message ***  
   2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1  
   2020-02-22  Brouard Nicolas  <brouard@ined.fr>
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Update mle=-3 (for computing Life expectancy
         * imach.c: Summary: Gnuplot indexations fixed (humm)          and life table from the data without any state)
   
         * imach.c:  2019-05-20  Brouard Nicolas  <brouard@ined.fr>
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  
           * version.h: Summary: version 0.99.r19
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Projection syntax simplified
         * imach.c: Summary: Version 0.99r12          We can now start projections, forward or backward, from the mean date
         Some cleanings, conformed with updated documentation.          of inteviews up to or down to a number of years of projection:
           prevforecast=1 yearsfproj=15.3 mobil_average=0
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>          or
           prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
         * version.h: *** empty log message ***          or
           prevbackcast=1 yearsbproj=12.3 mobil_average=1
         * version.h: Summary:0.99r11          or
           prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>  
   2019-05-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Temp  
           * imach.c: Summary: doxygen tex bug
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>  
   2019-05-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Temporary  
           * imach.c: Summary: There was some wrong lines added
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>  
   2019-05-09  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed  
           * Makefile, imach.c: *** empty log message ***
         * imach.c: Summary: Fixing data parameter line  
           * ChangeLog: Summary: C=
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some updates
         * imach.c: Summary: 0.99 in progress  
           * imach.c: Summary: Before ncovmax
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: *** empty log message ***
         * imach.c: *** empty log message ***  
           * imach.c: Summary: 0.99r18 unlimited number of individuals
         * imach.c: Summary: not working          The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: continue          * imach.c: Summary: Bug for young ages (<-30) will be in r17
   
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>  2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Starting values from frequencies          * Makefile: Summary: 0.99r16
   
         * imach.c: *** empty log message ***  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bugs fixed
   
         * imach.c: *** empty log message ***  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>          * imach.c:  Summary: Bug for young ages (<-30) will be in r17
   
         * imach.c: Summary: Fixing a lots  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bugs fixed
   
         * imach.c: Summary: gnuplot problem in Back projection to fix  2018-05-01  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Better          * imach.c:
           Summary: Bug fixed by providing frequencies only for non missing covariates
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>  
   2018-04-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: Improvement in Powell output in order to copy and paste          * imach.c: Summary: some minor bugs
   
         * imach.c: Summary: Starting tests of 0.99  2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: to valgrind          * README.txt: *** empty log message ***
   
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bugs fixed, valgrind tested
   
         * imach.c: *** empty log message ***  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
         * imach.c: *** empty log message ***          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
         * imach.c: Summary: not working  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some minor bugs fixed
         * imach.c: Summary: not working  
           * version.h: *** empty log message ***
         * imach.c: Summary: Not working  
   2018-02-27  Brouard Nicolas  <brouard@ined.fr>
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c: Summary: Completing for func too  
           * imach.c: Summary: Adding second argument for quitting
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixing some arrays, still debugging  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
         * imach.c:  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  
           * imach.c: Summary: temporary working
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>  
   2017-07-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temp  
           * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
         * imach.c: Summary: saving but not running  
   2017-07-17  Brouard Nicolas  <brouard@ined.fr>
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: BOM files can be read now
         * imach.c: Summary: Fixes  
   2017-06-30  Brouard Nicolas  <brouard@ined.fr>
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Graphs improvements
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  
           * imach.c: Summary: Saito's color
         * setup.iss, Makefile, version.h: *** empty log message ***  
   2017-06-29  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary  
           * imach.c: Summary: Version 0.99r14
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  
   2017-06-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
           * imach.c: Summary: More documentation on projections
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
         * imach.c: Summary: minor bug  
           * imach.c: Summary: Some bug with rint
         * imach.c: Summary: 0.99r2  
   2017-05-24  Brouard Nicolas  <brouard@ined.fr>
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c: *** empty log message ***  
   2017-05-23  Brouard Nicolas  <brouard@ined.fr>
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Code into subroutine, cleanings
         * imach.c: Summary: 0.99 Back projections  
   2017-05-18  Brouard Nicolas  <brouard@ined.fr>
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: Summary: Experimental backcast          Summary: backprojection and confidence intervals of backprevalence
   
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>  2017-05-13  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4 Warning and status=-2          * imach.c: Summary: temporary save for backprojection
   
         Version 0.98r4 is now:          * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
          - displaying an error when status is -1, date of interview unknown and date of death known;  
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  2017-04-26  Brouard Nicolas  <brouard@ined.fr>
         Older changes concerning s=-2, dating from 2005 have been supersed.  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
         * Makefile: *** empty log message ***  
           * imach.c: Summary: Labels in graphs
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: to save
         * imach.c: Summary: 0.98r4 working  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: Summary: linuxrpm added  
           * imach.c: *** empty log message ***
         * Makefile: *** empty log message ***  
   2017-04-05  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary not working  
           * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-04  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r4  
           * imach.c: Summary: Gnuplot indexations fixed (humm)
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * Makefile: *** empty log message ***          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
   
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile:          * imach.c: Summary: Version 0.99r12
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more          Some cleanings, conformed with updated documentation.
   
         * imach.c: Summary: minor typo  2017-03-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional          * version.h: *** empty log message ***
   
         Author: Nicolas Brouard          * version.h: Summary:0.99r11
   
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Start working on projected prevalences          * imach.c: Summary: Temp
   
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>  2017-03-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Adding ftolpl parameter          * imach.c: Summary: Temporary
         Author: N Brouard  
   2017-03-08  Brouard Nicolas  <brouard@ined.fr>
         We had difficulties to get smoothed confidence intervals. It was due  
         to the period prevalence which wasn't computed accurately. The inner          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
         parameter ftolpl is now an outer parameter of the .imach parameter  
         file after estepm. If ftolpl is small 1.e-4 and estepm too,          * imach.c: Summary: Fixing data parameter line
         computation are long.  
   2016-12-15  Brouard Nicolas  <brouard@ined.fr>
         * version.h: *** empty log message ***  
           * imach.c: Summary: 0.99 in progress
         * imach.c: Summary: temporary  
   2016-09-15  Brouard Nicolas  <brouard@ined.fr>
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * Makefile: *** empty log message ***  
           * imach.c: Summary: not working
         * setup.iss.in: Summary: some new subdirs  
   2016-09-08  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: continue
         * setup.iss.in:  
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  2016-09-07  Brouard Nicolas  <brouard@ined.fr>
   
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Starting values from frequencies
   
         * imach.c: *** empty log message ***          * imach.c: *** empty log message ***
   
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: *** empty log message ***
         Summary: 0.98r3 some clarification for graphs on likelihood contributions  
   2016-08-30  Brouard Nicolas  <brouard@ined.fr>
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Fixing a lots
         * imach.c: Summary: Some new graphs of contribution to likelihood  
   2016-08-29  Brouard Nicolas  <brouard@ined.fr>
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: gnuplot problem in Back projection to fix
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake          * imach.c: Summary: Better
   
         * imach.c: Summary: looking at better estimation of the hessian  2016-08-26  Brouard Nicolas  <brouard@ined.fr>
   
         Also a better criteria for convergence to the period prevalence And          * imach.c:
         therefore adding the number of years needed to converge. (The          Summary: Improvement in Powell output in order to copy and paste
         prevalence in any alive state shold sum to one  
           * imach.c: Summary: Starting tests of 0.99
         * Makefile: *** empty log message ***  
           * imach.c: Summary: to valgrind
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>  
   2016-08-25  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: Adding some overall graph on contribution to likelihood. Might change          * imach.c: *** empty log message ***
   
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>  2016-08-23  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: *** empty log message ***
   
         * imach.c: Summary: 0.98r0          * imach.c: Summary: not working
   
         - Some new graphs like suvival functions  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
         - Some bugs fixed like model=1+age+V2.  
           * imach.c: Summary: not working
         * ChangeLog, Makefile: Summary: 0.98r0  
           * imach.c: Summary: Not working
         * CMakeLists.txt: Summary: Some tests for setup.iss  
   2016-07-23  Brouard Nicolas  <brouard@ined.fr>
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
           * imach.c: Summary: Completing for func too
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  
   2016-07-22  Brouard Nicolas  <brouard@ined.fr>
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  
           * imach.c: Summary: Fixing some arrays, still debugging
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.  
   2016-07-21  Brouard Nicolas  <brouard@ined.fr>
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
           * imach.c:
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
   
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Merging 1.61 to 1.162          * imach.c: Summary: temp
   
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>          * imach.c: Summary: saving but not running
   
         * prevlim.h (Module):  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
   
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>          * imach.c: Summary: Fixes
   
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...  2016-02-19  Brouard Nicolas  <brouard@ined.fr>
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
           * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
 2010-04-29  brouard  <brouard@ined.fr>  
           * setup.iss, Makefile, version.h: *** empty log message ***
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.          * imach.c: Summary: temporary
   
 2010-04-26  brouard  <brouard@ined.fr>  2016-02-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): merging some libgsl code. Fixing computation          * imach.c: Summary: Probably last 0.98 stable version 0.98r6
         of likelione (using inter/intrapolation if mle = 0) in order to  
         get same likelihood as if mle=1.  2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         Some cleaning of code and comments added.  
           * imach.c: Summary: minor bug
 2009-10-29  brouard  <brouard@ined.fr>  
           * imach.c: Summary: 0.99r2
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  
   2016-02-15  Brouard Nicolas  <brouard@ined.fr>
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
           * imach.c: *** empty log message ***
         * imach.c (Module): Clarifications on computing e.j  
   2016-02-12  Brouard Nicolas  <brouard@ined.fr>
 2006-04-28  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.99 Back projections
         * imach.c (Module): Yes the sum of survivors was wrong since  
         imach-114 because nhstepm was no more computed in the age  2015-12-23  Brouard Nicolas  <brouard@ined.fr>
         loop. Now we define nhstepma in the age loop.  
         (Module): In order to speed up (in case of numerous covariates) we          * imach.c: Summary: Experimental backcast
         compute health expectancies (without variances) in a first step  
         and then all the health expectancies with variances or standard  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
         deviation (needs data from the Hessian matrices) which slows the  
         computation.          * imach.c: Summary: 0.98r4 Warning and status=-2
         In the future we should be able to stop the program is only health  
         expectancies and graph are needed without standard deviations.          Version 0.98r4 is now:
            - displaying an error when status is -1, date of interview unknown and date of death known;
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>           - permitting a status -2 when the vital status is unknown at a known date of right truncation.
           Older changes concerning s=-2, dating from 2005 have been supersed.
         * imach.iss (Module):  
           * Makefile: *** empty log message ***
         * imach.c (Module): bugs in evsi + population file added in htm output file  
   2015-12-16  Brouard Nicolas  <brouard@ined.fr>
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * Makefile: *** empty log message ***
         * imach.c (Module):  
           * imach.c: Summary: 0.98r4 working
 2006-03-20  Brouard Nicolas  <brouard@localhost>  
           * Makefile: Summary: linuxrpm added
         * imach.c (Module): <title> changed, corresponds to .htm file  
         name. <head> headers where missing.          * Makefile: *** empty log message ***
   
         * Makefile (Module): 0.98g          * imach.c: Summary: temporary not working
   
         * imach.c (Module): Weights can have a decimal point as for  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
         English (a comma might work with a correct LC_NUMERIC environment,  
         otherwise the weight is truncated).          * imach.c: Summary: 0.98r4
         Modification of warning when the covariates values are not 0 or  
         1.  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
         Version 0.98g  
           * Makefile: *** empty log message ***
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
   2015-11-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Comments concerning covariates added  
           * Makefile:
         * noreg-setup.iss (Module): Version 0.98f          Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
   
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup          * imach.c: Summary: minor typo
   
         * imach.c (Module): refinements in the computation of lli if          * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
         status=-2 in order to have more reliable computation if stepm is  
         not 1 month. Version 0.98f          Author: Nicolas Brouard
   
 2006-03-15  Brouard Nicolas  <brouard@localhost>  2015-11-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Bug if status = -2, the loglikelihood was          * imach.c: Summary: Start working on projected prevalences
         computed as likelihood omitting the logarithm. Version O.98e  
   2015-11-17  Brouard Nicolas  <brouard@ined.fr>
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: Adding ftolpl parameter
         * imach.c (Module): varevsij Comments added explaining the second          Author: N Brouard
         table of variances if popbased=1 .  
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.          We had difficulties to get smoothed confidence intervals. It was due
         (Module): Function pstamp added          to the period prevalence which wasn't computed accurately. The inner
         (Module): Version 0.98d          parameter ftolpl is now an outer parameter of the .imach parameter
           file after estepm. If ftolpl is small 1.e-4 and estepm too,
 2006-03-06  Brouard Nicolas  <brouard@localhost>          computation are long.
   
         * imach.c (Module): Variance-covariance wrong links and          * version.h: *** empty log message ***
         varian-covariance of ej. is needed (Saito).  
           * imach.c: Summary: temporary
 2006-02-27  Brouard Nicolas  <brouard@localhost>  
   2015-10-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): One freematrix added in mlikeli!  
           * Makefile: *** empty log message ***
 2006-02-26  Brouard Nicolas  <brouard@localhost>  
           * setup.iss.in: Summary: some new subdirs
         * imach.c (Module): Some improvements in processing parameter  
         filename with strsep.          * imach.c: *** empty log message ***
   
 2006-02-24  Brouard Nicolas  <brouard@localhost>          * setup.iss.in:
           Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         * imach.c (Module): Memory leaks checks with valgrind and:  
         datafile was not closed, some imatrix were not freed and on matrix  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
         allocation too.  
           * imach.c: *** empty log message ***
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
   2015-10-23  Brouard Nicolas  <brouard@ined.fr>
         * strsep.c (Module): Inclusion because not in mingw32!!!  
           * imach.c:
         * setup.iss.in (Module): IMACHSETUPVERSION added          Summary: 0.98r3 some clarification for graphs on likelihood contributions
   
         * noreg-setup.iss (Module): added to cvs tree  2015-10-01  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): IMACHSETUPVERSION added          * imach.c: Summary: Some new graphs of contribution to likelihood
   
 2006-01-30  BROUARD Nicolas  <brouard@localhost>  2015-09-30  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module, Module): Latest Makefile          * Makefile:
           Summary: Version read from version.h, itself read with cmake
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe  
           * imach.c: Summary: looking at better estimation of the hessian
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  
           Also a better criteria for convergence to the period prevalence And
         * noreg-setup.iss (Module): ADDED          therefore adding the number of years needed to converge. (The
           prevalence in any alive state shold sum to one
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  
           * Makefile: *** empty log message ***
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.  
   2015-09-22  Brouard Nicolas  <brouard@ined.fr>
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  
           * imach.c:
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          Summary: Adding some overall graph on contribution to likelihood. Might change
   
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  2015-09-15  Brouard Nicolas  <brouard@ined.fr>
   
 2005-09-30    <lievre@PC_00595>          * Makefile: *** empty log message ***
   
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.          * imach.c: Summary: 0.98r0
         (Module): If the status is missing at the last wave but we know  
         that the person is alive, then we can code his/her status as -2          - Some new graphs like survival functions
         (instead of missing=-1 in earlier versions) and his/her          - Some bugs fixed like model=1+age+V2.
         contributions to the likelihood is 1 - Prob of dying from last  
         health status (= 1-p13= p11+p12 in the easiest case of somebody in          * ChangeLog, Makefile: Summary: 0.98r0
         the healthy state at last known wave). Version is 0.98  
           * CMakeLists.txt: Summary: Some tests for setup.iss
 2004-05-20  Brouard Nicolas  <brouard@localhost>  
   2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         * imach.c (Repository):  
         Agnes added a direct estimation of mortality (without the need of          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
         computing period prevalence and differential mortality). Thus here  
         is version 0.97a which has been distributed to some people at  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  
         mortality using covariates is not done today. Estimating direct          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
         mortality is a very different process because it doesn't need  
         interpolation because it is easy to get the lx from the force of  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         the mortality mux in the simplest case as for a Gompertz (log mux  
         = a + b*x . But we have been able to incorporate the new code          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
         within former imach program (0.96d) without deteriorating too much  
         the understanding of the program.  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
   
 2003-06-25    <brouard@BROUARD>          * imach.c (Module): Merging 1.61 to 1.162
   
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         exist so I changed back to asctime which exists.  
         (Module): Version 0.96b          * prevlim.h (Module): 
   
 2003-06-24    <brouard@BROUARD>  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
   
         * imach.c (Module): Some bugs corrected for windows. Also, when          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
         mle=-1 a template is output in file "or"mypar.txt with the design          (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
         of the covariance matrix to be input.  
   2010-04-29  brouard  <brouard@ined.fr>
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): Checking covariates for more complex models
         * imach.c (Repository): Duplicated warning errors corrected.          than V1+V2. A lot of change to be done. Unstable.
         (Repository): Elapsed time after each iteration is now output. It  
         helps to forecast when convergence will be reached. Elapsed time  2010-04-26  brouard  <brouard@ined.fr>
         is stamped in powell.  We created a new html file for the graphs  
         concerning matrix of covariance. It has extension -cov.htm.          * imach.c (Module): merging some libgsl code. Fixing computation
           of likelione (using inter/intrapolation if mle = 0) in order to
 2003-06-23  Brouard Nicolas  <brouard@homebrou>          get same likelihood as if mle=1.
           Some cleaning of code and comments added.
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  
   2009-10-29  brouard  <brouard@ined.fr>
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  
   2006-06-30  Brouard Nicolas  <brouard@localhost>
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): Clarifications on computing e.j
   
         * imach.c (Repository): Check when date of death was earlier that  2006-04-28  Brouard Nicolas  <brouard@localhost>
         current date of interview. It may happen when the death was just  
         prior to the death. In this case, dh was negative and likelihood          * imach.c (Module): Yes the sum of survivors was wrong since
         was wrong (infinity). We still send an "Error" but patch by          imach-114 because nhstepm was no more computed in the age
         assuming that the date of death was just one stepm after the          loop. Now we define nhstepma in the age loop.
         interview.          (Module): In order to speed up (in case of numerous covariates) we
         (Repository): Because some people have very long ID (first column)          compute health expectancies (without variances) in a first step
         we changed int to long in num[] and we added a new lvector for          and then all the health expectancies with variances or standard
         memory allocation. But we also truncated to 8 characters (left          deviation (needs data from the Hessian matrices) which slows the
         truncation)          computation.
           In the future we should be able to stop the program is only health
         (Repository): No more line truncation errors.          expectancies and graph are needed without standard deviations.
   
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
         * imach.c (Repository): Add of a routine likelione (likelihood          * imach.iss (Module): 
         only once) which prints on a text file  
         (ilk) the contributions to the likelihood for each          * imach.c (Module): bugs in evsi + population file added in htm output file
         individual/wave.  
   2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  
         * imach.c (Repository): Replace "freqsummary" at a correct          * imach.c (Module): 
         place. It differs from routine "prevalence" which may be called  
         many times. Probs is memory consuming and must be used with  2006-03-20  Brouard Nicolas  <brouard@localhost>
         parcimony.  
           * imach.c (Module): <title> changed, corresponds to .htm file
 2003-06-17    <brouard@BROUARD>          name. <head> headers where missing.
   
         * timeval.h (Module): Added included file to make use of          * Makefile (Module): 0.98g
         gettimeofday working on win32 with cygwin.  
           * imach.c (Module): Weights can have a decimal point as for
 2003-05-16  Brouard Nicolas  <brouard@brouard>          English (a comma might work with a correct LC_NUMERIC environment,
         * imach.c (Module): Insert of a warning if the delay between two          otherwise the weight is truncated).
         waves is negative.          Modification of warning when the covariates values are not 0 or
           1. 
         * imach.c (Module):          Version 0.98g
   
 2003-05-03    <brouard@BROUARD>  2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
         * imach.c: Some cleaning          * imach.c (Module): Comments concerning covariates added
   
 2003-03-28    <brouard@BROUARD>          * noreg-setup.iss (Module): Version 0.98f
         * imach.c (Module): In version up to 0.92 likelihood was computed  
         as if date of death was unknown. Death was treated as any other          * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
         health state: the date of the interview describes the actual state  
         and not the date of a change in health state. The former idea was          * imach.c (Module): refinements in the computation of lli if
         to consider that at each interview the state was recorded          status=-2 in order to have more reliable computation if stepm is
         (healthy, disable or death) and IMaCh was corrected; but when we          not 1 month. Version 0.98f
         introduced the exact date of death then we should have modified  
         the contribution of an exact death to the likelihood. This new  2006-03-15  Brouard Nicolas  <brouard@localhost>
         contribution is smaller and very dependent of the step unit  
         stepm. It is no more the probability to die between last interview          * imach.c (Module): Bug if status = -2, the loglikelihood was
         and month of death but the probability to survive from last          computed as likelihood omitting the logarithm. Version O.98e
         interview up to one month before death multiplied by the  
         probability to die within a month. Thanks to Chris  2006-03-14  Brouard Nicolas  <brouard@localhost>
         Jackson for correcting this bug.  Former versions increased  
         mortality artificially. The bad side is that we add another loop          * imach.c (Module): varevsij Comments added explaining the second
           table of variances if popbased=1 .
           (Module): Covariances of eij, ekl added, graphs fixed, new html link.
         which slows down the processing. The difference can be up to 10%          (Module): Function pstamp added
           (Module): Version 0.98d 
   
         lower mortality.  2006-03-06  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Variance-covariance wrong links and
           varian-covariance of ej. is needed (Saito).
   
   2006-02-27  Brouard Nicolas  <brouard@localhost>
 2002-05-30    <brouard@BROUARD>  
           * imach.c (Module): One freematrix added in mlikeli!
   
   2006-02-26  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Some improvements in processing parameter
         *          filename with strsep.
   
   2006-02-24  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
         * imach.c (Module): Add correlation matrix of one-step          allocation too.
   
   2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         probabilities and covariance matrix  
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
   
           * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

Removed from v.1.44  
changed lines
  Added in v.1.67


FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>