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version 1.51, 2022/05/24 08:09:48 version 1.69, 2024/04/30 10:58:21
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 2022-05-24  Nicolas Brouard   <brouard@ined.fr>  2024-04-30  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): Some attempts to find a bug of wrong estimates          * (Module): In version 0.99s4, we incorporated the calculation of
         of confidencce intervals with product in the equation modelC          the std error of the proportion of total life expectancy spent in
           a specific state Var(e.j/e..) using the formula of Var(X/Y)
 2022-05-15  Nicolas Brouard   <brouard@ined.fr>          depending only of the variances of X and Y and expectancies.
   
         * imach.c (Module):  Some minor improvements  2024-04-24  Nicolas Brouard   <brouard@ined.fr>
   
 2022-04-13  Brouard Nicolas  <brouard@brouard.name>          * (Module): This version comes late after having tested
           successfully the praxis C version of Buckhardt.  But Buckardt's
         * imach.c (Module): Adding link to text data files          version was difficult to read and Gegenfurtner's version had a few
           typos which made its results less reliable than Buckhardt's
 2022-04-11  Nicolas Brouard   <brouard@ined.fr>          results.  The most important work consisted in retyping the Brent
           original PRAXIS program written in Algol W (published with errors,
         * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed          ommitting the transposition of matrix V before its QR reduction
           from Golub. I used the recent "awe" compiler from Gkynn Webster.
 2022-04-05  Brouard Nicolas  <brouard@ined.fr>          The awe library had errors, for example in arc tangent function
           which have been fixed.
         * imach.c (Module): Fixed covariates (dummy or quantitative)  
         with missing values have never been allowed but are ERRORS and          The main objective was to get identical results with the three
         program quits. Standard deviations of fixed covariates were          versions: (1) Algol W, (2) Buckhardt'C version as well (3)
         wrongly computed. Mean and standard deviations of time varying          Gegenfürtner C versions on the various test functions published by
         covariates are still not computed.          Brent in 1973 in Algol W.
   
 2022-03-17  Brouard Nicolas  <brouard@ined.fr>          Also, in order to compare them, the random function had to produce
           the same sequence for the 3 softwares. The random function used in
         * 99r25 Improvements in fixing discrepancies between covariates          imach corresponds to original Brent's random function written in
         missing in result line but in model.          Algol W.  Other point, in Algol W, the arrays of dimension n are
           'normal' mathematical arrays starting from 1 to n. But this is a
 *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>          real issue in C where, by default, arrays are starting from 0 to
         * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett          n-1. In Buckhardt, as well as in Gegenfürtner C code, it can be
           seen that authors while trying to mimick original Brent Algol W
 *2021-03-08  Nicolas Brouard   <brouard@ined.fr>          code are hesitating by changing either a loop originally from 1 to
           n in a loop from 0 to n-1, or keeping Brent's loop from 1 to n and
         * ./ (Module): Fixed bug on result:          shifting the index from original X(I) in Algol W to x[i-1] in C.
           But as IMaCh is using, since the beginning, the Numerical Recipes
 *2021-02-20  Nicolas Brouard   <brouard@ined.fr>          functions vector or matrix, I changed Geggenfürtner code to mimick
           the original Algol W arrays. Thus the X(I) is translated in C as
         * imach.c (Module): Fix bug on quitting after result lines!          x[i] which minimizes the errors. The Golub QR algorithm was
         (Module): Version 0.99r21          published in Algol with overflow errors which were reproduced in
           Brent's Algol W code. Buckhardt code fixed these errors which are
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>          much more problematic in C than in Algol W.  Thus Buckhardt code
           seems very safe, but i haven't chosen it for IMaCh because the C
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error          style is horrible and almost unreadable compared to Gegenfürtner
           CO code which is very close to Brent's original. Also what makes
           Buckhardt code more difficult to read is, instead of passing the
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>          minimum of parameters in the functions calls, as it is in Algol
           Brent's code or Gegenfürtner's code, the list of parameters is
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.          high. For example, the flin function LONG REAL PROCEDURE FLIN
           (LONG REAL VALUE L) has only one parameter in Algol W, the
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>          Gegenfürtner flin function had two parameters: static double
           flin(l, j) double l; { int i; double tflin[N];} but Buckhardt
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy          function has 14 parameters which makes the code unreadable and
         and life table from the data without any state)          useless. Gegenfürtner used a lot of static variables or functions
           which I tried to minimize. Also in Gegefürtner, array dimensions
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>          were fixed to N. In my adaptation the flin is static double
           flin(double l, int j) and the parameter used are global variables.
         * version.h: Summary: version 0.99.r19  
   2023-06-14  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Projection syntax simplified  
         We can now start projections, forward or backward, from the mean date          * imach.c (Module): Testing if conjugate gradient could be quicker
         of inteviews up to or down to a number of years of projection:          when lot of variables POWELLORIGINCONJUGATE
         prevforecast=1 yearsfproj=15.3 mobil_average=0  
         or  2023-05-23  Nicolas Brouard   <brouard@ined.fr>
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0  
         or          * imach.c (Module): Fixed PROB_r 
         prevbackcast=1 yearsbproj=12.3 mobil_average=1  
         or  2023-05-22  Nicolas Brouard   <brouard@ined.fr>
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1  
           * imach.c (Module): In the ILK....txt file, the number of columns
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>          before the covariates values is dependent of the number of states (16+nlstate): 0.99r46
   
         * imach.c: Summary: doxygen tex bug  2023-05-08  Nicolas Brouard   <brouard@ined.fr>
   
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>          *  (Module): Error V0 when result:. and model 1+age+V1: fixed
   
         * imach.c: Summary: There was some wrong lines added  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
   
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Inverting the model equation and fixingg bugs
           in the drawings
         * Makefile, imach.c: *** empty log message ***          "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
   
         * ChangeLog: Summary: C=  2023-04-24  Nicolas Brouard  <brouard@ined.fr>
   
         * imach.c: Summary: Some updates          * imach.c (Module): some bugs in printinggnuplot 
   
         * imach.c: Summary: Before ncovmax  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
   
         * version.h: *** empty log message ***          * imach.c (Module): Version 0.99r42 needed a newer version of
           Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         * imach.c: Summary: 0.99r18 unlimited number of individuals          version 5.0 or 5.1 distributed with IMaCh.
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.  
   2022-09-18  Nicolas Brouard   <brouard@ined.fr>
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Fixing when a state in the data is 0 or higher
         * imach.c: Summary: Bug for young ages (<-30) will be in r17          than lstate+ndeath. Fixing the plot of contribution to Likelihood.
   
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>  2022-09-16  Nicolas Brouard   <brouard@ined.fr>
   
         * Makefile: Summary: 0.99r16          * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17          * imach.c (Module): Version 0.99r39 with colored dummy covariates
           (fixed or time varying), using new last columns of
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          ILK_parameter.txt file.
   
         * imach.c: Summary: Some bugs fixed  2022-09-11  Nicolas Brouard   <brouard@ined.fr>
   
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Adding timevarying products of any kinds,
           should work before shifting cotvar from ncovcol+nqv columns in
         * imach.c:          order to have a correspondance between the column of cotvar and
         Summary: Bug fixed by providing frequencies only for non missing covariates          the id of column.
           (Module): Some cleaning and adding covariates in ILK.txt
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-09  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: some minor bugs  
           * imach.c (Module): Many improvements for fixing products of fixed
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>          timevarying as well as fixed * fixed, and test with quantitative
           covariate.
         * README.txt: *** empty log message ***  
   2022-09-04  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some bugs fixed, valgrind tested  
           * imach.c (Module): Now the easy runs i.e. without result or
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>          model=1+age only did not work. The defautl combination should be 1
           and not 0 because everything hasn't been tranformed yet.
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  
   2022-09-02  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  
         Summary: Computing mean and stdeviation of fixed quantitative variables          * imach.c: Version 0.99r35 because it outputs same results with
           1+age+V1+V1*age for females and 1+age for females only
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>          (education=1 noweight)
   
         * imach.c: Summary: Some minor bugs fixed  2022-08-31  Nicolas Brouard   <brouard@ined.fr>
   
         * version.h: *** empty log message ***          * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
   
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c (Module): Version 0.99r33 A lot of changes in
           reassigning covariates: my first idea was that people will always
         * imach.c: Summary: Adding second argument for quitting          use the first covariate V1 into the model but in fact they are
           producing data with many covariates and can use an equation model
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>          with some of the covariate; it means that in a model V2+V3 instead
           of codtabm(k,Tvaraff[j]) which calculates for combination k, for
         * Makefile, README.txt, imach.c: Summary: 0.99r15          three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          the equation model is restricted to two variables only (V2, V3)
           and the combination for V2 should be codtabm(k,1) instead of
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>          (codtabm(k,2), and the code should be
           codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
         * imach.c: Summary: temporary working          made. All of these should be simplified once a day like we did in
           hpxij() for example by using precov[nres] which is computed in
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>          decoderesult for each nres of each resultline. Loop should be done
           on the equation model globally by distinguishing only product with
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)          age (which are changing with age) and no more on type of
           covariates, single dummies, single covariates. 
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>  
   2022-08-06  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: BOM files can be read now  
           *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>  
   2022-08-03  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Graphs improvements  
           *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
         * imach.c: Summary: Saito's color  
   2022-07-25  Brouard Nicolas  <brouard@brouard.name>
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Error cptcovn instead of nsd in bmij (was
         * imach.c: Summary: Version 0.99r14          coredumped, revealed by Feiuno, thank you.
   
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: More documentation on projections          * r29 W and not sqrt(Wald)
   
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)  2022-07-22  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bug with rint          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
   
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>  2022-06-02  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: *** empty log message ***          * imach.c (Module): Adding the Wald tests from the log to the main
           htm for better display of the maximum likelihood estimators.
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>  
   2022-05-30  Brouard Nicolas  <brouard@brouard.name>
         * imach.c: Summary: Code into subroutine, cleanings  
           * imach.c: With products of covariates (age or dummies or
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>          quantitatives), estimates of parameters were good but when
           estimating variances the positions of newly created covariates
         * imach.c:          were wrongly assigned and results were wrong. Thank to Feinua_Sun!
         Summary: backprojection and confidence intervals of backprevalence  
   2022-05-24  Nicolas Brouard   <brouard@ined.fr>
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Some attempts to find a bug of wrong estimates
         * imach.c: Summary: temporary save for backprojection          of confidencce intervals with product in the equation modelC
   
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)  2022-05-15  Nicolas Brouard   <brouard@ined.fr>
   
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module):  Some minor improvements
   
         * imach.c: Summary: imach 0.99r13 Some bugs fixed  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: Labels in graphs          * imach.c (Module): Adding link to text data files
   
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>  2022-04-11  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: to save          * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
   
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>  2022-04-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c (Module): Fixed covariates (dummy or quantitative)
           with missing values have never been allowed but are ERRORS and
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>          program quits. Standard deviations of fixed covariates were
           wrongly computed. Mean and standard deviations of time varying
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1          covariates are still not computed.
   
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>  2022-03-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Gnuplot indexations fixed (humm)          * 99r25 Improvements in fixing discrepancies between covariates
           missing in result line but in model. 
         * imach.c:  
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Version 0.99r12  
         Some cleanings, conformed with updated documentation.          * ./ (Module): Fixed bug on result:
   
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>  *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
   
         * version.h: *** empty log message ***          * imach.c (Module): Fix bug on quitting after result lines!
           (Module): Version 0.99r21
         * version.h: Summary:0.99r11  
   2021-02-12  Nicolas Brouard   <brouard@ined.fr>
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): The use of a Windows BOM (huge) file is now an error
         * imach.c: Summary: Temp  
   
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>  2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Temporary          *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
   
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>  2020-02-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed          *  (Module): imach.c Update mle=-3 (for computing Life expectancy
           and life table from the data without any state)
         * imach.c: Summary: Fixing data parameter line  
   2019-05-20  Brouard Nicolas  <brouard@ined.fr>
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: Summary: version 0.99.r19
         * imach.c: Summary: 0.99 in progress  
           * imach.c: Summary: Projection syntax simplified
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>          We can now start projections, forward or backward, from the mean date
           of inteviews up to or down to a number of years of projection:
         * imach.c: *** empty log message ***          prevforecast=1 yearsfproj=15.3 mobil_average=0
           or
         * imach.c: Summary: not working          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
           or
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
         * imach.c: Summary: continue          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Starting values from frequencies          * imach.c: Summary: doxygen tex bug
   
         * imach.c: *** empty log message ***  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: There was some wrong lines added
   
         * imach.c: *** empty log message ***  2019-05-09  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>          * Makefile, imach.c: *** empty log message ***
   
         * imach.c: Summary: Fixing a lots          * ChangeLog: Summary: C=
   
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some updates
   
         * imach.c: Summary: gnuplot problem in Back projection to fix          * imach.c: Summary: Before ncovmax
   
         * imach.c: Summary: Better          * version.h: *** empty log message ***
   
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: 0.99r18 unlimited number of individuals
           The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
         * imach.c:  
         Summary: Improvement in Powell output in order to copy and paste  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Starting tests of 0.99          * imach.c: Summary: Bug for young ages (<-30) will be in r17
   
         * imach.c: Summary: to valgrind  2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>          * Makefile: Summary: 0.99r16
   
         * imach.c: *** empty log message ***  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bugs fixed
   
         * imach.c: *** empty log message ***  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * imach.c:  Summary: Bug for young ages (<-30) will be in r17
   
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * imach.c: Summary: Some bugs fixed
   
         * imach.c: Summary: Not working  2018-05-01  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c:
           Summary: Bug fixed by providing frequencies only for non missing covariates
         * imach.c: Summary: Completing for func too  
   2018-04-27  Brouard Nicolas  <brouard@ined.fr>
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: some minor bugs
         * imach.c: Summary: Fixing some arrays, still debugging  
   2018-04-21  Brouard Nicolas  <brouard@ined.fr>
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>  
           * README.txt: *** empty log message ***
         * imach.c:  
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods          * imach.c: Summary: Some bugs fixed, valgrind tested
   
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temp          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
         * imach.c: Summary: saving but not running          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixes  
           * imach.c: Summary: Some minor bugs fixed
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: *** empty log message ***
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  
   2018-02-27  Brouard Nicolas  <brouard@ined.fr>
         * setup.iss, Makefile, version.h: *** empty log message ***  
           * imach.c: *** empty log message ***
         * imach.c: Summary: temporary  
           * imach.c: Summary: Adding second argument for quitting
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
         * imach.c: Summary: minor bug  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99r2          * imach.c: Summary: temporary working
   
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>  2017-07-19  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
   
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>  2017-07-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99 Back projections          * imach.c: Summary: BOM files can be read now
   
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>  2017-06-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Experimental backcast          * imach.c: Summary: Graphs improvements
   
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Saito's color
   
         * imach.c: Summary: 0.98r4 Warning and status=-2  2017-06-29  Brouard Nicolas  <brouard@ined.fr>
   
         Version 0.98r4 is now:          * imach.c: Summary: Version 0.99r14
          - displaying an error when status is -1, date of interview unknown and date of death known;  
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  2017-06-27  Brouard Nicolas  <brouard@ined.fr>
         Older changes concerning s=-2, dating from 2005 have been supersed.  
           * imach.c: Summary: More documentation on projections
         * Makefile: *** empty log message ***  
           * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some bug with rint
         * Makefile: *** empty log message ***  
   2017-05-24  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r4 working  
           * imach.c: *** empty log message ***
         * Makefile: Summary: linuxrpm added  
   2017-05-23  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: Code into subroutine, cleanings
         * imach.c: Summary: temporary not working  
   2017-05-18  Brouard Nicolas  <brouard@ined.fr>
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: Summary: 0.98r4          Summary: backprojection and confidence intervals of backprevalence
   
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>  2017-05-13  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: temporary save for backprojection
   
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
   
         * Makefile:  2017-04-26  Brouard Nicolas  <brouard@ined.fr>
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
         * imach.c: Summary: minor typo  
           * imach.c: Summary: Labels in graphs
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
         Author: Nicolas Brouard  
           * imach.c: Summary: to save
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Start working on projected prevalences  
           * imach.c: *** empty log message ***
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-05  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Adding ftolpl parameter  
         Author: N Brouard          * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
   
         We had difficulties to get smoothed confidence intervals. It was due  2017-04-04  Brouard Nicolas  <brouard@ined.fr>
         to the period prevalence which wasn't computed accurately. The inner  
         parameter ftolpl is now an outer parameter of the .imach parameter          * imach.c: Summary: Gnuplot indexations fixed (humm)
         file after estepm. If ftolpl is small 1.e-4 and estepm too,  
         computation are long.          * imach.c:
           Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
         * version.h: *** empty log message ***  
   2017-04-03  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary  
           * imach.c: Summary: Version 0.99r12
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>          Some cleanings, conformed with updated documentation.
   
         * Makefile: *** empty log message ***  2017-03-30  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in: Summary: some new subdirs          * version.h: *** empty log message ***
   
         * imach.c: *** empty log message ***          * version.h: Summary:0.99r11
   
         * setup.iss.in:  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  
           * imach.c: Summary: Temp
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>  
   2017-03-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Temporary
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>  
   2017-03-08  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: 0.98r3 some clarification for graphs on likelihood contributions          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
   
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Fixing data parameter line
   
         * imach.c: Summary: Some new graphs of contribution to likelihood  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
   
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: 0.99 in progress
   
         * Makefile:  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
         Summary: Version read from version.h, itself read with cmake  
           * imach.c: *** empty log message ***
         * imach.c: Summary: looking at better estimation of the hessian  
           * imach.c: Summary: not working
         Also a better criteria for convergence to the period prevalence And  
         therefore adding the number of years needed to converge. (The  2016-09-08  Brouard Nicolas  <brouard@ined.fr>
         prevalence in any alive state shold sum to one  
           * imach.c: Summary: continue
         * Makefile: *** empty log message ***  
   2016-09-07  Brouard Nicolas  <brouard@ined.fr>
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Starting values from frequencies
         * imach.c:  
         Summary: Adding some overall graph on contribution to likelihood. Might change          * imach.c: *** empty log message ***
   
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: *** empty log message ***
   
         * imach.c: Summary: 0.98r0  2016-08-30  Brouard Nicolas  <brouard@ined.fr>
   
         - Some new graphs like survival functions          * imach.c: Summary: Fixing a lots
         - Some bugs fixed like model=1+age+V2.  
   2016-08-29  Brouard Nicolas  <brouard@ined.fr>
         * ChangeLog, Makefile: Summary: 0.98r0  
           * imach.c: Summary: gnuplot problem in Back projection to fix
         * CMakeLists.txt: Summary: Some tests for setup.iss  
           * imach.c: Summary: Better
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
   2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  
           * imach.c:
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>          Summary: Improvement in Powell output in order to copy and paste
   
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.          * imach.c: Summary: Starting tests of 0.99
   
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>          * imach.c: Summary: to valgrind
   
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  2016-08-25  Brouard Nicolas  <brouard@ined.fr>
   
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>          * imach.c: *** empty log message ***
   
         * imach.c (Module): Merging 1.61 to 1.162  2016-08-23  Brouard Nicolas  <brouard@ined.fr>
   
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>          * imach.c: *** empty log message ***
   
         * prevlim.h (Module):          * imach.c: Summary: not working
   
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...          * imach.c: Summary: not working
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
           * imach.c: Summary: Not working
 2010-04-29  brouard  <brouard@ined.fr>  
   2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.          * imach.c: Summary: Completing for func too
   
 2010-04-26  brouard  <brouard@ined.fr>  2016-07-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): merging some libgsl code. Fixing computation          * imach.c: Summary: Fixing some arrays, still debugging
         of likelione (using inter/intrapolation if mle = 0) in order to  
         get same likelihood as if mle=1.  2016-07-21  Brouard Nicolas  <brouard@ined.fr>
         Some cleaning of code and comments added.  
           * imach.c:
 2009-10-29  brouard  <brouard@ined.fr>          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
   
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
   
 2006-06-30  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: temp
   
         * imach.c (Module): Clarifications on computing e.j          * imach.c: Summary: saving but not running
   
 2006-04-28  Brouard Nicolas  <brouard@localhost>  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Yes the sum of survivors was wrong since          * imach.c: Summary: Fixes
         imach-114 because nhstepm was no more computed in the age  
         loop. Now we define nhstepma in the age loop.  2016-02-19  Brouard Nicolas  <brouard@ined.fr>
         (Module): In order to speed up (in case of numerous covariates) we  
         compute health expectancies (without variances) in a first step          * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
         and then all the health expectancies with variances or standard  
         deviation (needs data from the Hessian matrices) which slows the          * setup.iss, Makefile, version.h: *** empty log message ***
         computation.  
         In the future we should be able to stop the program is only health          * imach.c: Summary: temporary
         expectancies and graph are needed without standard deviations.  
   2016-02-17  Brouard Nicolas  <brouard@ined.fr>
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: Summary: Probably last 0.98 stable version 0.98r6
         * imach.iss (Module):  
   2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): bugs in evsi + population file added in htm output file  
           * imach.c: Summary: minor bug
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: Summary: 0.99r2
         * imach.c (Module):  
   2016-02-15  Brouard Nicolas  <brouard@ined.fr>
 2006-03-20  Brouard Nicolas  <brouard@localhost>  
           * imach.c: *** empty log message ***
         * imach.c (Module): <title> changed, corresponds to .htm file  
         name. <head> headers where missing.  2016-02-12  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): 0.98g          * imach.c: Summary: 0.99 Back projections
   
         * imach.c (Module): Weights can have a decimal point as for  2015-12-23  Brouard Nicolas  <brouard@ined.fr>
         English (a comma might work with a correct LC_NUMERIC environment,  
         otherwise the weight is truncated).          * imach.c: Summary: Experimental backcast
         Modification of warning when the covariates values are not 0 or  
         1.  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
         Version 0.98g  
           * imach.c: Summary: 0.98r4 Warning and status=-2
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           Version 0.98r4 is now:
         * imach.c (Module): Comments concerning covariates added           - displaying an error when status is -1, date of interview unknown and date of death known;
            - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         * noreg-setup.iss (Module): Version 0.98f          Older changes concerning s=-2, dating from 2005 have been supersed.
   
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup          * Makefile: *** empty log message ***
   
         * imach.c (Module): refinements in the computation of lli if  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
         status=-2 in order to have more reliable computation if stepm is  
         not 1 month. Version 0.98f          * Makefile: *** empty log message ***
   
 2006-03-15  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: 0.98r4 working
   
         * imach.c (Module): Bug if status = -2, the loglikelihood was          * Makefile: Summary: linuxrpm added
         computed as likelihood omitting the logarithm. Version O.98e  
           * Makefile: *** empty log message ***
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: temporary not working
         * imach.c (Module): varevsij Comments added explaining the second  
         table of variances if popbased=1 .  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  
         (Module): Function pstamp added          * imach.c: Summary: 0.98r4
         (Module): Version 0.98d  
   2015-12-08  Brouard Nicolas  <brouard@ined.fr>
 2006-03-06  Brouard Nicolas  <brouard@localhost>  
           * Makefile: *** empty log message ***
         * imach.c (Module): Variance-covariance wrong links and  
         varian-covariance of ej. is needed (Saito).  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-27  Brouard Nicolas  <brouard@localhost>          * Makefile:
           Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         * imach.c (Module): One freematrix added in mlikeli!  
           * imach.c: Summary: minor typo
 2006-02-26  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
         * imach.c (Module): Some improvements in processing parameter  
         filename with strsep.          Author: Nicolas Brouard
   
 2006-02-24  Brouard Nicolas  <brouard@localhost>  2015-11-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Memory leaks checks with valgrind and:          * imach.c: Summary: Start working on projected prevalences
         datafile was not closed, some imatrix were not freed and on matrix  
         allocation too.  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: Adding ftolpl parameter
           Author: N Brouard
         * strsep.c (Module): Inclusion because not in mingw32!!!  
           We had difficulties to get smoothed confidence intervals. It was due
         * setup.iss.in (Module): IMACHSETUPVERSION added          to the period prevalence which wasn't computed accurately. The inner
           parameter ftolpl is now an outer parameter of the .imach parameter
         * noreg-setup.iss (Module): added to cvs tree          file after estepm. If ftolpl is small 1.e-4 and estepm too,
           computation are long.
         * Makefile (Module): IMACHSETUPVERSION added  
           * version.h: *** empty log message ***
 2006-01-30  BROUARD Nicolas  <brouard@localhost>  
           * imach.c: Summary: temporary
         * Makefile (Module, Module): Latest Makefile  
   2015-10-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe  
           * Makefile: *** empty log message ***
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  
           * setup.iss.in: Summary: some new subdirs
         * noreg-setup.iss (Module): ADDED  
           * imach.c: *** empty log message ***
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  
           * setup.iss.in:
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          * imach.c: *** empty log message ***
   
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
   
 2005-09-30    <lievre@PC_00595>          * imach.c:
           Summary: 0.98r3 some clarification for graphs on likelihood contributions
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  
         (Module): If the status is missing at the last wave but we know  2015-10-01  Brouard Nicolas  <brouard@ined.fr>
         that the person is alive, then we can code his/her status as -2  
         (instead of missing=-1 in earlier versions) and his/her          * imach.c: Summary: Some new graphs of contribution to likelihood
         contributions to the likelihood is 1 - Prob of dying from last  
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  2015-09-30  Brouard Nicolas  <brouard@ined.fr>
         the healthy state at last known wave). Version is 0.98  
           * Makefile:
 2004-05-20  Brouard Nicolas  <brouard@localhost>          Summary: Version read from version.h, itself read with cmake
   
         * imach.c (Repository):          * imach.c: Summary: looking at better estimation of the hessian
         Agnes added a direct estimation of mortality (without the need of  
         computing period prevalence and differential mortality). Thus here          Also a better criteria for convergence to the period prevalence And
         is version 0.97a which has been distributed to some people at          therefore adding the number of years needed to converge. (The
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of          prevalence in any alive state shold sum to one
         mortality using covariates is not done today. Estimating direct  
         mortality is a very different process because it doesn't need          * Makefile: *** empty log message ***
         interpolation because it is easy to get the lx from the force of  
         the mortality mux in the simplest case as for a Gompertz (log mux  2015-09-22  Brouard Nicolas  <brouard@ined.fr>
         = a + b*x . But we have been able to incorporate the new code  
         within former imach program (0.96d) without deteriorating too much          * imach.c:
         the understanding of the program.          Summary: Adding some overall graph on contribution to likelihood. Might change
   
 2003-06-25    <brouard@BROUARD>  2015-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't          * Makefile: *** empty log message ***
         exist so I changed back to asctime which exists.  
         (Module): Version 0.96b          * imach.c: Summary: 0.98r0
   
 2003-06-24    <brouard@BROUARD>          - Some new graphs like survival functions
           - Some bugs fixed like model=1+age+V2.
         * imach.c (Module): Some bugs corrected for windows. Also, when  
         mle=-1 a template is output in file "or"mypar.txt with the design          * ChangeLog, Makefile: Summary: 0.98r0
         of the covariance matrix to be input.  
           * CMakeLists.txt: Summary: Some tests for setup.iss
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  
   2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         * imach.c (Repository): Duplicated warning errors corrected.  
         (Repository): Elapsed time after each iteration is now output. It          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
         helps to forecast when convergence will be reached. Elapsed time  
         is stamped in powell.  We created a new html file for the graphs  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
         concerning matrix of covariance. It has extension -cov.htm.  
           *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  
   2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  
           *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  
   2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  
           * imach.c (Module): Merging 1.61 to 1.162
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  
   2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
   
         * imach.c (Repository): Check when date of death was earlier that          * prevlim.h (Module): 
         current date of interview. It may happen when the death was just  
         prior to the death. In this case, dh was negative and likelihood  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
         was wrong (infinity). We still send an "Error" but patch by  
         assuming that the date of death was just one stepm after the          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
         interview.          (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
         (Repository): Because some people have very long ID (first column)  
         we changed int to long in num[] and we added a new lvector for  2010-04-29  brouard  <brouard@ined.fr>
         memory allocation. But we also truncated to 8 characters (left  
         truncation)          * imach.c (Module): Checking covariates for more complex models
           than V1+V2. A lot of change to be done. Unstable.
         (Repository): No more line truncation errors.  
   2010-04-26  brouard  <brouard@ined.fr>
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): merging some libgsl code. Fixing computation
         * imach.c (Repository): Add of a routine likelione (likelihood          of likelione (using inter/intrapolation if mle = 0) in order to
         only once) which prints on a text file          get same likelihood as if mle=1.
         (ilk) the contributions to the likelihood for each          Some cleaning of code and comments added.
         individual/wave.  
   2009-10-29  brouard  <brouard@ined.fr>
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  
         * imach.c (Repository): Replace "freqsummary" at a correct          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
         place. It differs from routine "prevalence" which may be called  
         many times. Probs is memory consuming and must be used with  2006-06-30  Brouard Nicolas  <brouard@localhost>
         parcimony.  
           * imach.c (Module): Clarifications on computing e.j
 2003-06-17    <brouard@BROUARD>  
   2006-04-28  Brouard Nicolas  <brouard@localhost>
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.          * imach.c (Module): Yes the sum of survivors was wrong since
           imach-114 because nhstepm was no more computed in the age
 2003-05-16  Brouard Nicolas  <brouard@brouard>          loop. Now we define nhstepma in the age loop.
         * imach.c (Module): Insert of a warning if the delay between two          (Module): In order to speed up (in case of numerous covariates) we
         waves is negative.          compute health expectancies (without variances) in a first step
           and then all the health expectancies with variances or standard
         * imach.c (Module):          deviation (needs data from the Hessian matrices) which slows the
           computation.
 2003-05-03    <brouard@BROUARD>          In the future we should be able to stop the program is only health
           expectancies and graph are needed without standard deviations.
         * imach.c: Some cleaning  
   2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
 2003-03-28    <brouard@BROUARD>  
         * imach.c (Module): In version up to 0.92 likelihood was computed          * imach.iss (Module): 
         as if date of death was unknown. Death was treated as any other  
         health state: the date of the interview describes the actual state          * imach.c (Module): bugs in evsi + population file added in htm output file
         and not the date of a change in health state. The former idea was  
         to consider that at each interview the state was recorded  2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         (healthy, disable or death) and IMaCh was corrected; but when we  
         introduced the exact date of death then we should have modified          * imach.c (Module): 
         the contribution of an exact death to the likelihood. This new  
         contribution is smaller and very dependent of the step unit  2006-03-20  Brouard Nicolas  <brouard@localhost>
         stepm. It is no more the probability to die between last interview  
         and month of death but the probability to survive from last          * imach.c (Module): <title> changed, corresponds to .htm file
         interview up to one month before death multiplied by the          name. <head> headers where missing.
         probability to die within a month. Thanks to Chris  
         Jackson for correcting this bug.  Former versions increased          * Makefile (Module): 0.98g
         mortality artificially. The bad side is that we add another loop  
         which slows down the processing. The difference can be up to 10%          * imach.c (Module): Weights can have a decimal point as for
         lower mortality.          English (a comma might work with a correct LC_NUMERIC environment,
           otherwise the weight is truncated).
 2002-05-30    <brouard@BROUARD>          Modification of warning when the covariates values are not 0 or
         *          1. 
         * imach.c (Module): Add correlation matrix of one-step          Version 0.98g
         probabilities and covariance matrix  
   2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.c (Module): Comments concerning covariates added
   
           * noreg-setup.iss (Module): Version 0.98f
   
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
   
           * imach.c (Module): refinements in the computation of lli if
           status=-2 in order to have more reliable computation if stepm is
           not 1 month. Version 0.98f
   
   2006-03-15  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Bug if status = -2, the loglikelihood was
           computed as likelihood omitting the logarithm. Version O.98e
   
   2006-03-14  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): varevsij Comments added explaining the second
           table of variances if popbased=1 .
           (Module): Covariances of eij, ekl added, graphs fixed, new html link.
           (Module): Function pstamp added
           (Module): Version 0.98d 
   
   2006-03-06  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Variance-covariance wrong links and
           varian-covariance of ej. is needed (Saito).
   
   2006-02-27  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): One freematrix added in mlikeli!
   
   2006-02-26  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
   
   2006-02-24  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
   
   2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
   
           * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   
Removed from v.1.51  
changed lines
  Added in v.1.69

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