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version 1.242, 2016/08/30 15:01:20
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version 1.244, 2016/09/02 07:17:34
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| /* $Id$ |
/* $Id$ |
| $State$ |
$State$ |
| $Log$ |
$Log$ |
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Revision 1.244 2016/09/02 07:17:34 brouard |
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*** empty log message *** |
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Revision 1.243 2016/09/02 06:45:35 brouard |
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*** empty log message *** |
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| Revision 1.242 2016/08/30 15:01:20 brouard |
Revision 1.242 2016/08/30 15:01:20 brouard |
| Summary: Fixing a lots |
Summary: Fixing a lots |
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Line 2222 void powell(double p[], double **xi, int
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Line 2228 void powell(double p[], double **xi, int
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| /* printf("\n"); */ |
/* printf("\n"); */ |
| /* fprintf(ficlog,"\n"); */ |
/* fprintf(ficlog,"\n"); */ |
| } |
} |
| if (2.0*fabs(fp-(*fret)) <= ftol*(fabs(fp)+fabs(*fret))) { /* Did we reach enough precision? */ |
/* if (2.0*fabs(fp-(*fret)) <= ftol*(fabs(fp)+fabs(*fret))) { /\* Did we reach enough precision? *\/ */ |
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if (2.0*fabs(fp-(*fret)) <= ftol) { /* Did we reach enough precision? */ |
| /* We could compare with a chi^2. chisquare(0.95,ddl=1)=3.84 */ |
/* We could compare with a chi^2. chisquare(0.95,ddl=1)=3.84 */ |
| /* By adding age*age in a model, the new -2LL should be lower and the difference follows a */ |
/* By adding age*age in a model, the new -2LL should be lower and the difference follows a */ |
| /* a chisquare statistics with 1 degree. To be significant at the 95% level, it should have */ |
/* a chisquare statistics with 1 degree. To be significant at the 95% level, it should have */ |
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Line 3213 double func( double *x)
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Line 3220 double func( double *x)
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| Then computes with function pmij which return a matrix p[i][j] giving the elementary probability |
Then computes with function pmij which return a matrix p[i][j] giving the elementary probability |
| to be observed in j being in i according to the model. |
to be observed in j being in i according to the model. |
| */ |
*/ |
| ioffset=2+nagesqr+cptcovage; |
ioffset=2+nagesqr ; |
| /* Fixed */ |
/* Fixed */ |
| for (k=1; k<=ncovf;k++){ /* Simple and product fixed covariates without age* products */ |
for (k=1; k<=ncovf;k++){ /* Simple and product fixed covariates without age* products */ |
| cov[ioffset+TvarFind[k]]=covar[Tvar[TvarFind[k]]][i];/* V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1, only V1 is fixed (k=6)*/ |
cov[ioffset+TvarFind[k]]=covar[Tvar[TvarFind[k]]][i];/* V5+V4+V3+V4*V3+V5*age+V2+V1*V2+V1*age+V1, only V1 is fixed (k=6)*/ |
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Line 3532 double funcone( double *x)
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Line 3539 double funcone( double *x)
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| for(k=1; k<=nlstate; k++) ll[k]=0.; |
for(k=1; k<=nlstate; k++) ll[k]=0.; |
| ioffset=0; |
ioffset=0; |
| for (i=1,ipmx=0, sw=0.; i<=imx; i++){ |
for (i=1,ipmx=0, sw=0.; i<=imx; i++){ |
| ioffset=2+nagesqr+cptcovage; |
/* ioffset=2+nagesqr+cptcovage; */ |
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ioffset=2+nagesqr; |
| /* Fixed */ |
/* Fixed */ |
| /* for (k=1; k<=cptcovn;k++) cov[2+nagesqr+k]=covar[Tvar[k]][i]; */ |
/* for (k=1; k<=cptcovn;k++) cov[2+nagesqr+k]=covar[Tvar[k]][i]; */ |
| /* for (k=1; k<=ncoveff;k++){ /\* Simple and product fixed Dummy covariates without age* products *\/ */ |
/* for (k=1; k<=ncoveff;k++){ /\* Simple and product fixed Dummy covariates without age* products *\/ */ |
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Line 6521 void printinggnuplot(char fileresu[], ch
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Line 6529 void printinggnuplot(char fileresu[], ch
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| else fprintf(ficgp,"\" t\"\" w l lt 0,\\\n"); |
else fprintf(ficgp,"\" t\"\" w l lt 0,\\\n"); |
| } /* state */ |
} /* state */ |
| } /* vpopbased */ |
} /* vpopbased */ |
| fprintf(ficgp,"\nset out;set out \"%s_%d.svg\"; replot; set out; \n",subdirf2(optionfilefiname,"E_"),k1); /* Buggy gnuplot */ |
fprintf(ficgp,"\nset out;set out \"%s_%d-%d.svg\"; replot; set out; \n",subdirf2(optionfilefiname,"E_"),k1,nres); /* Buggy gnuplot */ |
| } /* end nres */ |
} /* end nres */ |
| } /* k1 end 2 eme*/ |
} /* k1 end 2 eme*/ |
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