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 <h1 align="center"><font color="#00006A">Computing Health  <h1 align="center"><font color="#00006A">Computing Health
 Expectancies using IMaCh</font></h1>  Expectancies using IMaCh</font></h1>
 <h1 align="center"><font color="#00006A" size="5">(a Maximum  <h1 align="center"><font color="#00006A" size="5">(a Maximum
 Likelihood Computer Program using Interpolation of Markov Chains)</font></h1>  Likelihood Computer Program using Interpolation of Markov Chains)</font></h1>
   
 <p align="center"><a href="http://www.ined.fr/"><img  <p align="center"><a href="http://www.ined.fr/"><img
 src="doc/logo-ined.gif" border="0" width="151" height="76"></a><img  src="doc/logo-ined.gif" border="0" width="151" height="76"></a><img
 src="doc/euroreves2.gif" width="151" height="75"></p>  src="doc/euroreves2.gif" width="151" height="75"></p>
   
 <h3 align="center"><a href="http://www.ined.fr/"><font  <h3 align="center"><a href="http://www.ined.fr/"><font
 color="#00006A">INED</font></a><font color="#00006A"> and </font><a  color="#00006A">INED</font></a><font color="#00006A"> and </font><a
 href="http://euroreves.ined.fr"><font color="#00006A">EUROREVES</font></a></h3>  href="http://euroreves.ined.fr"><font color="#00006A">EUROREVES</font></a></h3>
   
 <p align="center"><font color="#00006A" size="4"><strong>June 2004</strong></font></p>  <p align="center"><font color="#00006A" size="4"><strong>August 2014</strong></font></p>
   
 <hr size="3" color="#EC5E5E">  <hr size="3" color="#EC5E5E">
   
 <h4 align="center"><font color="#00006A">Authors of the program: </font><a  <h4 align="center"><font color="#00006A">Authors of the program: </font><a
 href="http://sauvy.ined.fr/~brouard"><font color="#00006A">Nicolas  href="http://sauvy.ined.fr/~brouard"><font color="#00006A">Nicolas
 Brouard</font></a><font color="#00006A">, senior researcher at  Brouard</font></a><font color="#00006A">, senior researcher at
 the </font><a href="http://www.ined.fr"><font color="#00006A">Institut  the </font><a href="http://www.ined.fr"><font color="#00006A">Institut
 National d'Etudes Démographiques</font></a><font color="#00006A">  National d'Etudes Démographiques</font></a><font color="#00006A">
 (INED, Paris) in the "Mortality, Health and Epidemiology  (INED, Paris) in the "Mortality, Health and Epidemiology
 Research Unit" </font></h4>  Research Unit" </font></h4>
   
 <h4 align="center"><font color="#00006A">and Agnès Lièvre (PHD student at INED)</font></h4>  <h4 align="center"><font color="#00006A">and Agnès Lièvre (former PHD student at INED)</font></h4>
   
 <h4><font color="#00006A">Contribution to the mathematics: C. R.  <h4><font color="#00006A">Contribution to the mathematics: C. R.
 Heathcote </font><font color="#00006A" size="2">(Australian  Heathcote </font><font color="#00006A" size="2">(Australian
 National University, Canberra).</font></h4>  National University, Canberra).</font></h4>
   
 <h4><font color="#00006A">Contact: Agnès Lièvre (</font><a  <h4><font color="#00006A">Contact: Nicolas Brouard (</font><a
 href="mailto:lievre@ined.fr"><font color="#00006A"><i>lievre@ined.fr</i></font></a><font  href="mailto:brouard@ined.fr"><font color="#00006A"><i>brouard@ined.fr</i></font></a><font
 color="#00006A">) </font></h4>  color="#00006A">) </font></h4>
   
 <p> Main publication concerning the method is  <p> Main publication concerning the method is 
 <a href=http://taylorandfrancis.metapress.com/app/home/contribution.asp?wasp=1f99bwtvmk5yrb7hlhw3&referrer=parent&backto=issue,1,2;journal,2,5;linkingpublicationresults,1:300265,1  <a href=http://dx.doi.org/10.1080/713644739>Lièvre A., Brouard N. and Heathcote Ch. (2003) Estimating Health Expectancies 
 >Lièvre A., Brouard N. and Heathcote Ch. (2003) Estimating Health Expectancies  from Cross-longitudinal surveys. <em>Mathematical Population Studies</em>.- 10(4), pp. 211-248. DOI 10.1080/713644739</a>
 from Cross-longitudinal surveys. <em>Mathematical Population Studies</em>.- 10(4), pp. 211-248</a>  </p>
 </p>  
   <h2><font color="#EC5E5E"><strong>Download and instructions for installation</strong></font></h2>
 <h2><font color="#EC5E5E"><strong>New installation method</strong></font></h2>  
   <h3> Current versions August 2014 </h3>
 <p> Until June 2004 the installation did consist in a zip file which  <ul>
 had to be extracted in the directory of your choice. But with version  <li>On Windows (win9X, 2000, XP, Vista, Windows 7, Windows 8): 0.98nV</li>
 0.97b IMaCh we are using a windows installer (Inno setup).  Both  <li>On MacOS/X Leopard: 0.98nV</li>
 executables <tt>imach.exe</tt> and <tt>gnuplot.exe</tt> (the grapher  <li>On Linux, ask for the CVS version </li>
 that we are using) have to be on the same directory.  </ul>
   The grapher that IMaCh uses is gnuplot
 <br> In order to facilitate the use of IMaCh we associated the .imach  from <a href="http://www.gnuplot.info/">http://www.gnuplot.info/</a>.
 extension to two features: editing and running. Thus by right clicking  Gnuplot has evolved since version IMaCh 0.98k and therefore you need
 on a foo.imach file you can either 'edit'the file (default) with  at least Gnuplot 4.6. Otherwise you need to adapt the .gp file
 the notepad editor or 'run' it with gnuplot (you need a recent version).<br>  produced in order to run with your old gnuplot.
   
       But we discovered that on some computers, people are not allowed  With the installer provided for OS/X and Windows, a recent gnuplot
       to modify the windows registry and need to have Administrator privileges.  binary is provided and will be installed on the same directory that
   the IMaCh binary.  It is better to use your own Gnuplot installation
      <br>  and IMaCh will test the command '''gnuplot''' but if the binary in not
       Thus we built two windows installer: a standard setup which will install  in your path, it will make a error but will use the binary provided by
       the progam (usually in <tt>\Program Files\imach</tt> and will  the installers. Using recent gnuplot installations, there is usually a
       modify the registry to associate <tt>.imach</tt> extension to notepad and imach, and a  possibility to add the gnuplot binary in your path.
       second which will not alter the registry. With this second installer you  
       will be able to install the programs in your home directory and  <h3>On Windows (win9X, 2000, XP, Vista, Windows 7, Windows 8)</h3>
       run it by clicking on the imach.exe icon. But you won't be able  <p> Until June 2004 the installation did consist in a zip file which
       to use the facility of the right clicking.  had to be extracted in the directory of your choice. But with version
 </p>  0.98d and above IMaCh we are using a windows installer (Inno setup).
   
 <ul>  <br> In order to facilitate the use of IMaCh we associated the .imach
     <li>Download latest <font size="2" face="Courier New"><strong>imach-0.97b-setup.exe</strong></font>  extension to two features: editing and running. Thus by right clicking
         and execute it .</li>  on a foo.imach file you can either 'edit'the file (default) with
     <li>Different sub-directories are created:  the notepad editor or 'run' it with gnuplot (you need a recent version).<br>
           <ul>  
             <li>doc: most of the documentation. The main document        But we discovered that on some computers, people are not allowed
                 is <a href="doc/imach.htm">doc/imach.htm</a> .</li>        to modify the windows registry and need to have Administrator privileges.
                 <ul> Here are also two data files:<font size="4"  
                 face="Times New Roman"> </font><ul>       <br>
                     <li><font face="Courier New">data1.txt</font>        Thus we built two windows installer: a standard setup which will install
                         which is the main data file on which the        the progam (usually in <tt>\Program Files\imach</tt> and will
                         program has been run as the example in        modify the registry to associate <tt>.imach</tt> extension to notepad and imach, and a
                         the main documentation.</li>        second which will not alter the registry. With this second installer you
                     <li><font face="Courier New">mydata.txt </font>a        will be able to install the programs in your home directory and
                         smaller data file which you can use for        run it by clicking on the imach.exe icon. But you won't be able
                         your own trial.</li>        to use the facility of the right clicking.
                 </ul>  </p>
                </ul>  
             <li>bin: <ul> <li><font face="Courier">imach.exe</font>  <ul>
             the executable for Windows 95/98/NT compiled with gcc from      <li>Download latest <font size="2" face="Courier
             cygwin.</li> <li> gnuplot, the grapher use by IMaCh.  Its          New"><strong>imach-0.98nX-1-setup.exe</strong></font> and
             reference manual and sources can be accessed from <a          execute it .</li>
             href="http://www.gnuplot.info/">http://www.gnuplot.info/</a>.      <li> Download <font size="2" face="Courier
                 </ul>      New"><strong>gnuplot</strong></font> 4.6.5
             </li>      at <a href="http://www.gnuplot.info/">http://www.gnuplot.info/</a>
             <li>src: This subdirectory contains the source of the      ; at the end of the install it is asked if you want to have the
                 program. It can be obtained by asking us by mail <a      gnuplot binary in your path, say yes.</li>
                 href="mailto:brouard@ined.fr">mailto:brouard@ined.fr</a>      <li>Different sub-directories are created:
                 and <a href="mailto:lievre@ined.fr">mailto:lievre@ined.fr</a>            <ul>
                 .</li>              <li>doc: most of the documentation. The main document
         </ul>                  is <a href="wiki/index.php/Documentation">http://euroreves.ined.fr/imach/wiki/index.php/Documentation</a>
     </li>                  .</li>
     <li>Right click on the .imach to either edit it or execute it with Imach.</li>                  <ul> Here are also two data files:<font size="4"
     <li>Read the file README.txt or, better, click on <a                  face="Times New Roman"> </font><ul>
         href="doc/imach.htm">doc/imach.htm</a></li>                      <li><font face="Courier New">data1.txt</font>
 </ul>                          which is the main data file on which the
                           program has been run as the example in
 <p><a href="doc/imach.htm"><font color="#FF0000" size="6">Click                          the main documentation.</li>
 here to access to the detailed documentation</font></a></p>                      <li><font face="Courier New">mydata.txt </font>a
                           smaller data file which you can use for
 <p>This software have been partly granted by <a                          your own trial.</li>
 href="http://euroreves.ined.fr">Euro-REVES</a>, a concerted action                  </ul>
 from the European Union. In 2003-2004 it has been granted by the                 </ul>
 French Institute on Longevity. Our work is copyrighted as a GNU              <li>bin: <ul> 
 software product, i.e. program and software can be distributed freely                  <li><font face="Courier">imach.exe</font></li> 
 for non commercial use, but actually some sources are not widely                  <li> gnuplot, the grapher used by IMaCh.  Its
 distributed today because they borrow some codes from the book              reference manual and sources can be accessed from <a
 "Numerical Recipes in C" which is copyrighted. If you are an owner of              href="http://www.gnuplot.info/">http://www.gnuplot.info/</a>.
 theses sources you can get our sources by asking us with a simple                  </ul>
 justification (name, email, Institute) <a              </li>
 href="mailto:imach-dev@listes.ined.fr">mailto:imach-dev@listes.ined.fr</a>              <li>src: This subdirectory contains the source of the
 </p>                  program. It can be obtained by asking us by mail brouard at ined pointfr
                    .</li>
 <p>Today we are two developpers only but we already use a private CVS          </ul>
 server. The CVS server will be freely accessible as soon as we have      </li>
 replaced "Numerical Recipes in C maximization routines" with      <li>Right click on the .imach to either edit it or execute it with
 equivalent routines from the new GNU scientific library.      IMaCh. At the end of the program, IMaCh uses gnuplot to produce
       the graphs, then you can open your browser to read the main .htm
 <p>Latest documentation can be accessed at <a      file with all results and graphs. If gnuplot is not installed or
 href="http://euroreves.ined.fr/imach">http://euroreves.ined.fr/imach</a><br>      not in your path, you have to run gnuplot on the ".gp" source file
 Imach version (0.63 of 16 march 2000) can be downloaded in zip file <a      generated by imach. Using wgnuplot you have to "open" it. </li>
 href="http://euroreves.ined.fr/imach/imach.zip">http://euroreves.ined.fr/imach/imach.zip</a>      <li>Read the file README.txt
 <br> Imach version 0.64 May 2001 can be downloaded in zip file <a  </ul>
 href="http://euroreves.ined.fr/imach/imach-0-64.zip">http://euroreves.ined.fr/imach/imach-0-64.zip</a>  
 <br>  <br>
 Imach version 0.8 March 2002 can be downloaded in zip file <a  Imach version 0.98nX of August 2014 can be downloaded as a setup.exe file
 href="http://euroreves.ined.fr/imach/imach-08.zip">http://euroreves.ined.fr/imach/imach-08.zip</a>  <a href="imach-0.98nX-1-setup.exe">
 <br>  http://euroreves.ined.fr/imach/imach-0.98nX-1-setup.exe (compiled with
 Imach version 0.8a May 2002 can be downloaded in zip file <a  free Visual Studio compiler 2010 32 bits)</a>. If MSVCR100.dll is
 href="http://euroreves.ined.fr/imach/imach-08a.zip">  missing on your windows system (32 or 64 bits) please download the
 http://euroreves.ined.fr/imach/imach-08a.zip</a>  library from Microsoft.com by installing
 <br>  the <a href="http://www.microsoft.com/en-us/download/details.aspx?id=8328">32Bit:
 Imach version 0.96d February 2004 can be downloaded in zip file <a  Microsoft Visual C++ 2010 SP1 Redistributable Package (x86)</a>. The
 href="http://euroreves.ined.fr/imach/imach-096d.zip">  IMaCh program and gnuplot will be installed in the directory that you
 http://euroreves.ined.fr/imach/imach-096d.zip</a>  want (usually in Program Files). Please check the md5sum which is
   f801319e8dbc852296e4fba13029c7e0 imach-0.98nX-1-setup.exe
 <br>  
 Imach version 0.97b of June 21 2004 can be downloaded as a setup.exe file  <br>After installation a right click on a .imach file lets edit with
 <a href=imach-0.97b-2-setup.exe">  the notepad text editor which is less useful than other text editor
 http://euroreves.ined.fr/imach/imach-0.97b-2-setup.exe</a>. The IMaCh  like workpad but exists on most Windows installation.  <br> For people
 program and gnuplot will be installed in the directory that you want  who are not allowed to modify the registry of their Windows
 (usually in Program Files).  We made some errors in the new setup and  installation here is a second
 some erlier versions did not work. Please check the md5sum which is  setup <a href="imach-0.98nX-1-noreg-setup.exe">imach-0.98nX-1-noreg-setup.exe</a>.
 3cb42bf71396d531d4bc3d42fee46a52 imach-0.97b-2-setup.exe  <br>
   766443598a014e8d9cf5cbaccab99e0d imach-0.98nX-1-noreg-setup.exe
 <br>We also changed the wordpad editor to notepad which is less useful  <p> The executable for Windows cross-compiled on OS/X with
 but exists on most Windows installation.  <br> For people who are not  i386-mingw32-gcc doesn't produce efficient binary compared to native
 allowed to modify the registry of their Windows installation here is a  Visual Studio 2010 (used here). imach-0.98nV-1-setup.exe is compiled
 second setup <a  with i386-mingw32-gcc .
 href="imach-0.97b-2-noreg-setup.exe">imach-0.97b-2-noreg-setup.exe</a>.  
 </p>  <p><a href="oldversions.html">Old Windows versions are accessible here.</a>
   <h3>On Mac OS/X Leopard  (August 2014)</h3>
 <p> There is a public mailing list of IMaCh's users.  You can  
 subscribe by sending a mail to <a  IMaCh can be easily compiled with gcc 3.3 on MacIntosh as soon as
 href=mailto:imach-users-subscribe@listes.ined.fr>imach-users-subscribe@listes.ined.fr</a>  XCode (free download from Apple) is intalled on your MaCIntosh.<p>
 (and unsubscribe with <a  
 href=mailto:imach-users-unsubscribe@listes.ined.fr>imach-users-unsubscribe@listes.ined.fr</a>  It take a litle more time to get version of Gnuplot 4.6.5+ for Mac OS/X
 </p>  and to compile it on a MaC.  Currently graphs are output as png
 <br>$Id$<br>  files. We will probably moved to svg because the svg format is
 <!--  $State$  scalable and thus figures are easier to improve and insert in other documents.
   
   
   <p>
   You can download a dmg file
           at <a href="imach0.98nX.dmg">imach0.98nX.dmg</a> (md5sum
           ff9d2389abc2d3ce106203d89fd096d4). Like on Windows, two
           sub-directories are created
         <tt>bin</tt> and <tt>html</tt> . In the bin subdirectory you
         will find two executables <tt>imach</tt> itself and
         <tt>gnuplot</tt>. 
   
   <p>
   You need to click on <tt>imach</tt> application and IMaCh will be
   launched in a Terminal window, asking you to enter
   a <tt>parameter</tt> file. A parameter file is a text file with an
   extension <tt>.imach</tt> (but you can use a <tt>.txt</tt> extension
   if you want.  Among the parameters required, a data file name has to
   be entered. It can be a relative file name
   like <tt>../../data/data1.txt</tt>. <br> If you open a new finder you
   can drag an IMaCh parameter file into the terminal IMaCh Window that
   you just created.
   <p>
   At the end of the run, and it order for the terminal window not to
   disappear, the program will prompt for a command like "<tt>e</tt>" for
   edit (with your browser) or "<tt>q</tt>" for quit.
   
   <br> The consequence for you is just that you have to use your finder
         or browser (there is no more difference now) and click on the
         <tt>.html</tt> (or .htm) file created. The filename of this html
         file has the same name as your parameter file, only the extension
         .imach is changed to .html.
   
   <h3>On Linux</h3> There are various versions of Linux, gnuplot is
   distributed on most distributions. Just verify that your version of
   gnuplot is more recent than version 4.6.5 . I haven't had time to make
   a rpm yet, just ask us for the CVS tree location (not completely GPL
   today), and compile the sources. Remarks concerning the Linux versions
   are similar to the Mac OS/X version.
   <p>
   <font color="#FF0000" size="3"><tt>New (August 2014)</tt></font> You
   can download a binary tar file for respectively a 32 bits or 64 bits
   Linux box:<p>
   cf9784f1d3f464b2f0c7ddf2fea84062 <a href="imach-Linux-0.98nX-linux-i586-bin.tar.bz2">imach-Linux-0.98nX-linux-i586-bin.tar.bz2</a><p>
   or
   0974bcf30596f94f97d0e80acaf5a1bb <a href="imach-Linux-0.98nX-linux-x86-64-bin.tar.bz2">imach-Linux-0.98nX-linux-x86-64-bin.tar.bz2</a> <p>
   The binaries have been crosscompiled with gcc on my OS/X Mac.  Each
   binary contains two directories <tt>bin</tt> and <tt>html/doc</tt>
   . In the bin subdirectory you will find the <tt>imach</tt> executable
   and in <tt>html/doc</tt> the <tt>biaspar.imach</tt> test parameter
   file and its corresponding data file <tt>data1.txt</tt>. In order to
   run the test the command is <tt>./bin/imach
   ./html/doc/biaspar.imach</tt> <p>
         <tt>gnuplot</tt> should be installed otherwise at the end of the
         run (optimization and calculations last at least 7 minutes on
         today most efficient hardwares) the command <tt>gnuplot
         biaspar.gp</tt> will fail. If successful, typing <tt>e</tt> will
         open <tt>biaspar.htm</tt> with your browser and all the results
         including graphs generated by gnuplot will appear. Please
         subscribe to the mailing
         list <tt>imach-users@listes.ined.fr</tt> for comments and
         reports on the performance (see the Performance section of
         the <a href="http://euroreves.ined.fr/imach/wiki">wiki</a>).
   
   
   <p><a href="http://euroreves.ined.fr/imach/wiki/index.php/Documentation"><font color="#FF0000" size="6">Click
   here to access to the detailed documentation</font></a></p>
   
   <p>This software have been partly granted
   by <a href="http://euroreves.ined.fr">Euro-REVES</a>, a concerted
   action from the European Union. In 2003-2004 it has been granted by
   the French Institute on Longevity. In January 2014, it has been
   granted by the Japan Society for the Promotion of Science
   (Grant-in-Aid for Scientific Research 25293121. 
   <p>
   Our work is copyrighted as a GNU software product, i.e. program and
   software can be distributed freely for non commercial use, but
   actually some sources are not widely distributed today because they
   borrow some codes from the book "Numerical Recipes in C" which is
   copyrighted. If you are an owner of theses sources you can get our
   sources by asking us with a simple justification (name, email,
   Institute) <a href="mailto:imach-dev@listes.ined.fr">mailto:imach-dev@listes.ined.fr</a>
   </p>
   
   <p>Today we are two developpers only but we already use a private CVS
   server. The CVS server will be freely accessible as soon as we have
   replaced "Numerical Recipes in C maximization routines" with
   equivalent routines from the new GNU scientific library.
   
   <p>Latest documentation can be accessed at <a
   href="http://euroreves.ined.fr/imach/wiki/index.php/Documentation">http://euroreves.ined.fr/imach/wiki/index.php/Documentation</a><br>
   
   <p> There is a public mailing list of IMaCh's users.  You can
   subscribe by sending a mail to <a
   href=mailto:imach-users-subscribe@listes.ined.fr>imach-users-subscribe@listes.ined.fr</a>
   (and unsubscribe with <a
   href=mailto:imach-users-unsubscribe@listes.ined.fr>imach-users-unsubscribe@listes.ined.fr</a>
   </p>
   
   <h2>IMaCh Wiki</h2>
   As discussed at the REVES meeting in <a href="http://www.prw.le.ac.uk/cgi-bin/reves/2005.cgi">Beijing</a>, we created a Wiki for IMaCh were people having used IMaCh (or having not been able to use it because of obscure or unadequate features) can add tips and discuss various aspects of IMaCh and interface with other statistical softwares. In many aspects, our "official documentation" is not accurate enough.
   
   <p> Wikis are a very promising way to give information closer to your expectations. It also a very dynamic movement if you consider the first <a href="http://wikimania.wikimedia.org/wiki/Main_Page">International Wikimedia Conference in Francfurt</a> (August 2005), where most Wikis were represented and in particular <a href="http://wikipedia.org">Wikipedia</a>.
   
   <p><a href="wiki"><font color="#FF0000" size="6">Access to the IMaCh Wiki</font></a></p>. Please ask for a username and password.
   
   
   
   
   <br>$Id$<br>
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   Adding the noreg setup for users who don't have privileges to modify Windows registries.    Adding the noreg setup for users who don't have privileges to modify Windows registries.
   
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