Diff for /imach/src/ChangeLog between versions 1.38 and 1.74

version 1.38, 2019/05/09 15:06:14 version 1.74, 2024/07/08 14:25:11
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 2018-05-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2024-07-08  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed          * imach.c (Module): Some bug fixes: in drawings when age*age is
           included in the model as well as with quantitative variables.
 2018-05-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2024-07-02  Nicolas Brouard  <brouard@ined.fr>
         * imach.c:  
         Summary: Bug fixed by providing frequencies only for non missing covariates          * imach.c (Module): Trying compiling on Linux with clang (instead
           of gcc which is too slow) and lot of warnings suppressed
 2018-04-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2024-06-28  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: some minor bugs  
           * imach.c (Module): fixing some bugs in gnuplot and quantitative
 2018-04-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          variables, but not completely solved
   
         * README.txt: *** empty log message ***  2024-06-28  Nicolas Brouard  <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed, valgrind tested          * imach.c (Module): s6 errors with age*age (harmless).
   
 2018-04-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2024-05-12  Nicolas Brouard   <brouard@ined.fr>
   
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16          * imach.c Version 0.99s5 In fact, the covariance of total life
           expectancy e.. with a partial life expectancy e.j is high,
         * imach.c:          therefore the complete matrix of variance covariance has to be
         Summary: Computing mean and stdeviation of fixed quantitative variables          included in the formula of the standard error of the proportion of
           total life expectancy spent in a specific state:
 2018-04-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          var(X/Y)=mu_x^2/mu_y^2*(sigma_x^2/mu_x^2 -2
           sigma_xy/mu_x/mu_y+sigma^2/mu_y^2).  Also an error with mle=-3
         * imach.c: Summary: Some minor bugs fixed          made the program core dump. It is fixed in this version.
   
         * version.h: *** empty log message ***  2024-04-30  Nicolas Brouard   <brouard@ined.fr>
   
 2018-02-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * (Module): In version 0.99s4, we incorporated the calculation of
           the std error of the proportion of total life expectancy spent in
         * imach.c: *** empty log message ***          a specific state Var(e.j/e..) using the formula of Var(X/Y)
           depending only of the variances of X and Y and expectancies.
         * imach.c: Summary: Adding second argument for quitting  
   2024-04-24  Nicolas Brouard   <brouard@ined.fr>
 2018-02-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * (Module): This version comes late after having tested
         * Makefile, README.txt, imach.c: Summary: 0.99r15          successfully the praxis C version of Buckhardt.  But Buckardt's
           version was difficult to read and Gegenfurtner's version had a few
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          typos which made its results less reliable than Buckhardt's
           results.  The most important work consisted in retyping the Brent
 2017-07-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          original PRAXIS program written in Algol W (published with errors,
           ommitting the transposition of matrix V before its QR reduction
         * imach.c: Summary: temporary working          from Golub. I used the recent "awe" compiler from Gkynn Webster.
           The awe library had errors, for example in arc tangent function
 2017-07-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          which have been fixed.
   
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)          The main objective was to get identical results with the three
           versions: (1) Algol W, (2) Buckhardt'C version as well (3)
 2017-07-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          Gegenfürtner C versions on the various test functions published by
           Brent in 1973 in Algol W.
         * imach.c: Summary: BOM files can be read now  
           Also, in order to compare them, the random function had to produce
 2017-06-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          the same sequence for the 3 softwares. The random function used in
           imach corresponds to original Brent's random function written in
         * imach.c: Summary: Graphs improvements          Algol W.  Other point, in Algol W, the arrays of dimension n are
           'normal' mathematical arrays starting from 1 to n. But this is a
         * imach.c: Summary: Saito's color          real issue in C where, by default, arrays are starting from 0 to
           n-1. In Buckhardt, as well as in Gegenfürtner C code, it can be
 2017-06-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          seen that authors while trying to mimick original Brent Algol W
           code are hesitating by changing either a loop originally from 1 to
         * imach.c: Summary: Version 0.99r14          n in a loop from 0 to n-1, or keeping Brent's loop from 1 to n and
           shifting the index from original X(I) in Algol W to x[i-1] in C.
 2017-06-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          But as IMaCh is using, since the beginning, the Numerical Recipes
           functions vector or matrix, I changed Geggenfürtner code to mimick
         * imach.c: Summary: More documentation on projections          the original Algol W arrays. Thus the X(I) is translated in C as
           x[i] which minimizes the errors. The Golub QR algorithm was
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)          published in Algol with overflow errors which were reproduced in
           Brent's Algol W code. Buckhardt code fixed these errors which are
         * imach.c: Summary: Some bug with rint          much more problematic in C than in Algol W.  Thus Buckhardt code
           seems very safe, but i haven't chosen it for IMaCh because the C
 2017-05-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          style is horrible and almost unreadable compared to Gegenfürtner
           CO code which is very close to Brent's original. Also what makes
         * imach.c: *** empty log message ***          Buckhardt code more difficult to read is, instead of passing the
           minimum of parameters in the functions calls, as it is in Algol
 2017-05-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          Brent's code or Gegenfürtner's code, the list of parameters is
           high. For example, the flin function LONG REAL PROCEDURE FLIN
         * imach.c: Summary: Code into subroutine, cleanings          (LONG REAL VALUE L) has only one parameter in Algol W, the
           Gegenfürtner flin function had two parameters: static double
 2017-05-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          flin(l, j) double l; { int i; double tflin[N];} but Buckhardt
           function has 14 parameters which makes the code unreadable and
         * imach.c:          useless. Gegenfürtner used a lot of static variables or functions
         Summary: backprojection and confidence intervals of backprevalence          which I tried to minimize. Also in Gegefürtner, array dimensions
           were fixed to N. In my adaptation the flin is static double
 2017-05-13  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          flin(double l, int j) and the parameter used are global variables.
   
         * imach.c: Summary: temporary save for backprojection  2023-06-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)          * imach.c (Module): Testing if conjugate gradient could be quicker
           when lot of variables POWELLORIGINCONJUGATE
 2017-04-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2023-05-23  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: imach 0.99r13 Some bugs fixed  
           * imach.c (Module): Fixed PROB_r 
         * imach.c: Summary: Labels in graphs  
   2023-05-22  Nicolas Brouard   <brouard@ined.fr>
 2017-04-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): In the ILK....txt file, the number of columns
         * imach.c: Summary: to save          before the covariates values is dependent of the number of states (16+nlstate): 0.99r46
   
 2017-04-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2023-05-08  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          *  (Module): Error V0 when result:. and model 1+age+V1: fixed
   
 2017-04-05  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
   
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1          * imach.c (Module): Inverting the model equation and fixingg bugs
           in the drawings
 2017-04-04  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
   
         * imach.c: Summary: Gnuplot indexations fixed (humm)  2023-04-24  Nicolas Brouard  <brouard@ined.fr>
   
         * imach.c:          * imach.c (Module): some bugs in printinggnuplot 
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  
   2022-09-19  Nicolas Brouard   <brouard@ined.fr>
 2017-04-03  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Version 0.99r42 needed a newer version of
         * imach.c: Summary: Version 0.99r12          Gnuplot. But newer version 0.99r43 should run with the Gnuplot
           version 5.0 or 5.1 distributed with IMaCh.
         Some cleanings, conformed with updated documentation.  
   2022-09-18  Nicolas Brouard   <brouard@ined.fr>
 2017-03-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Fixing when a state in the data is 0 or higher
         * version.h: *** empty log message ***          than lstate+ndeath. Fixing the plot of contribution to Likelihood.
   
         * version.h: Summary:0.99r11  2022-09-16  Nicolas Brouard   <brouard@ined.fr>
   
 2017-03-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
   
         * imach.c: Summary: Temp  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
 2017-03-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
   
         * imach.c: Summary: Temporary  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
 2017-03-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Version 0.99r39 with colored dummy covariates
           (fixed or time varying), using new last columns of
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed          ILK_parameter.txt file.
   
         * imach.c: Summary: Fixing data parameter line  2022-09-11  Nicolas Brouard   <brouard@ined.fr>
   
 2016-12-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Adding timevarying products of any kinds,
           should work before shifting cotvar from ncovcol+nqv columns in
         * imach.c: Summary: 0.99 in progress          order to have a correspondance between the column of cotvar and
           the id of column.
 2016-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          (Module): Some cleaning and adding covariates in ILK.txt
   
         * imach.c: *** empty log message ***  2022-09-09  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: not working          * imach.c (Module): Many improvements for fixing products of fixed
           timevarying as well as fixed * fixed, and test with quantitative
 2016-09-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          covariate.
   
         * imach.c: Summary: continue  2022-09-04  Nicolas Brouard   <brouard@ined.fr>
   
 2016-09-07  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Now the easy runs i.e. without result or
           model=1+age only did not work. The defautl combination should be 1
         * imach.c: Summary: Starting values from frequencies          and not 0 because everything hasn't been tranformed yet.
   
         * imach.c: *** empty log message ***  2022-09-02  Nicolas Brouard   <brouard@ined.fr>
   
 2016-09-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Version 0.99r35 because it outputs same results with
           1+age+V1+V1*age for females and 1+age for females only
         * imach.c: *** empty log message ***          (education=1 noweight)
   
 2016-08-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-08-31  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Fixing a lots          * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
   
 2016-08-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: gnuplot problem in Back projection to fix          * imach.c (Module): Version 0.99r33 A lot of changes in
           reassigning covariates: my first idea was that people will always
         * imach.c: Summary: Better          use the first covariate V1 into the model but in fact they are
           producing data with many covariates and can use an equation model
 2016-08-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          with some of the covariate; it means that in a model V2+V3 instead
           of codtabm(k,Tvaraff[j]) which calculates for combination k, for
         * imach.c:          three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         Summary: Improvement in Powell output in order to copy and paste          the equation model is restricted to two variables only (V2, V3)
           and the combination for V2 should be codtabm(k,1) instead of
         Author:          (codtabm(k,2), and the code should be
           codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
         * imach.c: Summary: Starting tests of 0.99          made. All of these should be simplified once a day like we did in
           hpxij() for example by using precov[nres] which is computed in
         * imach.c: Summary: to valgrind          decoderesult for each nres of each resultline. Loop should be done
           on the equation model globally by distinguishing only product with
 2016-08-25  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          age (which are changing with age) and no more on type of
           covariates, single dummies, single covariates. 
         * imach.c: *** empty log message ***  
   2022-08-06  Nicolas Brouard   <brouard@ined.fr>
 2016-08-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
         * imach.c: *** empty log message ***  
   2022-08-03  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: not working  
           *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
 2016-08-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-07-25  Brouard Nicolas  <brouard@brouard.name>
         * imach.c: Summary: not working  
           * imach.c (Module): Error cptcovn instead of nsd in bmij (was
         * imach.c: Summary: Not working          coredumped, revealed by Feiuno, thank you.
   
 2016-07-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Completing for func too          * r29 W and not sqrt(Wald)
   
 2016-07-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-07-22  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Fixing some arrays, still debugging          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
   
 2016-07-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-06-02  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c:          * imach.c (Module): Adding the Wald tests from the log to the main
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods          htm for better display of the maximum likelihood estimators.
   
 2016-07-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-05-30  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: temp          * imach.c: With products of covariates (age or dummies or
           quantitatives), estimates of parameters were good but when
         * imach.c: Summary: saving but not running          estimating variances the positions of newly created covariates
           were wrongly assigned and results were wrong. Thank to Feinua_Sun!
 2016-07-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-05-24  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Fixes  
           * imach.c (Module): Some attempts to find a bug of wrong estimates
 2016-02-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          of confidencce intervals with product in the equation modelC
   
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  2022-05-15  Nicolas Brouard   <brouard@ined.fr>
   
         * setup.iss, Makefile, version.h: *** empty log message ***          * imach.c (Module):  Some minor improvements
   
         * imach.c: Summary: temporary  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
   
 2016-02-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Adding link to text data files
   
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  2022-04-11  Nicolas Brouard   <brouard@ined.fr>
   
 2016-02-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
   
         * imach.c: Summary: minor bug  2022-04-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99r2          * imach.c (Module): Fixed covariates (dummy or quantitative)
           with missing values have never been allowed but are ERRORS and
 2016-02-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          program quits. Standard deviations of fixed covariates were
           wrongly computed. Mean and standard deviations of time varying
         * imach.c: *** empty log message ***          covariates are still not computed.
   
 2016-02-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-03-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99 Back projections          * 99r25 Improvements in fixing discrepancies between covariates
           missing in result line but in model. 
 2015-12-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Experimental backcast          * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
   
 2015-12-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4 Warning and status=-2          * ./ (Module): Fixed bug on result:
   
         Version 0.98r4 is now:  *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
          - displaying an error when status is -1, date of interview unknown and date of death known;  
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.          * imach.c (Module): Fix bug on quitting after result lines!
         Older changes concerning s=-2, dating from 2005 have been supersed.          (Module): Version 0.99r21
   
         * Makefile: *** empty log message ***  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
   
 2015-12-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
   
         * Makefile: *** empty log message ***  
   2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
         * imach.c: Summary: 0.98r4 working  
           *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
         * Makefile: Summary: linuxrpm added  
   2020-02-22  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           *  (Module): imach.c Update mle=-3 (for computing Life expectancy
         * imach.c: Summary: temporary not working          and life table from the data without any state)
   
 2015-12-11  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4          * version.h: Summary: version 0.99.r19
   
 2015-12-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Projection syntax simplified
           We can now start projections, forward or backward, from the mean date
         * Makefile: *** empty log message ***          of inteviews up to or down to a number of years of projection:
           prevforecast=1 yearsfproj=15.3 mobil_average=0
 2015-11-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          or
           prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
         * Makefile:          or
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
         * imach.c: Summary: minor typo          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
         Author: Nicolas Brouard          * imach.c: Summary: doxygen tex bug
   
 2015-11-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Start working on projected prevalences          * imach.c: Summary: There was some wrong lines added
   
 2015-11-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2019-05-09  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Adding ftolpl parameter          * Makefile, imach.c: *** empty log message ***
         Author: N Brouard  
           * ChangeLog: Summary: C=
         We had difficulties to get smoothed confidence intervals. It was due  
         to the period prevalence which wasn't computed accurately. The inner          * imach.c: Summary: Some updates
         parameter ftolpl is now an outer parameter of the .imach parameter  
         file after estepm. If ftolpl is small 1.e-4 and estepm too,          * imach.c: Summary: Before ncovmax
         computation are long.  
           * version.h: *** empty log message ***
         * version.h: *** empty log message ***  
           * imach.c: Summary: 0.99r18 unlimited number of individuals
         * imach.c: Summary: temporary          The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   
 2015-10-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Bug for young ages (<-30) will be in r17
   
         * setup.iss.in: Summary: some new subdirs  2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * Makefile: Summary: 0.99r16
   
         * setup.iss.in:  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  
           * imach.c: Summary: Some bugs fixed
 2015-10-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c:  Summary: Bug for young ages (<-30) will be in r17
 2015-10-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: 0.98r3 some clarification for graphs on likelihood contributions          * imach.c: Summary: Some bugs fixed
   
 2015-10-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-05-01  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Some new graphs of contribution to likelihood          * imach.c:
           Summary: Bug fixed by providing frequencies only for non missing covariates
 2015-09-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2018-04-27  Brouard Nicolas  <brouard@ined.fr>
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake          * imach.c: Summary: some minor bugs
   
         * imach.c: Summary: looking at better estimation of the hessian  2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   
         Also a better criteria for convergence to the period prevalence And          * README.txt: *** empty log message ***
         therefore adding the number of years needed to converge. (The  
         prevalence in any alive state shold sum to one          * imach.c: Summary: Some bugs fixed, valgrind tested
   
         * Makefile: *** empty log message ***  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
 2015-09-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
         * imach.c:          * imach.c:
         Summary: Adding some overall graph on contribution to likelihood. Might change          Summary: Computing mean and stdeviation of fixed quantitative variables
   
 2015-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-04-19  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Some minor bugs fixed
   
         * imach.c: Summary: 0.98r0          * version.h: *** empty log message ***
   
         - Some new graphs like suvival functions  2018-02-27  Brouard Nicolas  <brouard@ined.fr>
         - Some bugs fixed like model=1+age+V2.  
           * imach.c: *** empty log message ***
         * ChangeLog, Makefile: Summary: 0.98r0  
           * imach.c: Summary: Adding second argument for quitting
         * CMakeLists.txt: Summary: Some tests for setup.iss  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.          * imach.c: Summary: temporary working
   
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  2017-07-19  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)          * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
   
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>  2017-07-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Merging 1.61 to 1.162          * imach.c: Summary: BOM files can be read now
   
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  2017-06-30  Brouard Nicolas  <brouard@ined.fr>
   
         * prevlim.h (Module):          * imach.c: Summary: Graphs improvements
   
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>          * imach.c: Summary: Saito's color
   
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...  2017-06-29  Brouard Nicolas  <brouard@ined.fr>
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
           * imach.c: Summary: Version 0.99r14
 2010-04-29  brouard  <brouard@ined.fr>  
   2017-06-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.          * imach.c: Summary: More documentation on projections
   
 2010-04-26  brouard  <brouard@ined.fr>          * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
   
         * imach.c (Module): merging some libgsl code. Fixing computation          * imach.c: Summary: Some bug with rint
         of likelione (using inter/intrapolation if mle = 0) in order to  
         get same likelihood as if mle=1.  2017-05-24  Brouard Nicolas  <brouard@ined.fr>
         Some cleaning of code and comments added.  
           * imach.c: *** empty log message ***
 2009-10-29  brouard  <brouard@ined.fr>  
   2017-05-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  
           * imach.c: Summary: Code into subroutine, cleanings
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
   2017-05-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Clarifications on computing e.j  
           * imach.c:
 2006-04-28  Brouard Nicolas  <brouard@localhost>          Summary: backprojection and confidence intervals of backprevalence
   
         * imach.c (Module): Yes the sum of survivors was wrong since  2017-05-13  Brouard Nicolas  <brouard@ined.fr>
         imach-114 because nhstepm was no more computed in the age  
         loop. Now we define nhstepma in the age loop.          * imach.c: Summary: temporary save for backprojection
         (Module): In order to speed up (in case of numerous covariates) we  
         compute health expectancies (without variances) in a first step          * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
         and then all the health expectancies with variances or standard  
         deviation (needs data from the Hessian matrices) which slows the  2017-04-26  Brouard Nicolas  <brouard@ined.fr>
         computation.  
         In the future we should be able to stop the program is only health          * imach.c: Summary: imach 0.99r13 Some bugs fixed
         expectancies and graph are needed without standard deviations.  
           * imach.c: Summary: Labels in graphs
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
         * imach.iss (Module):  
           * imach.c: Summary: to save
         * imach.c (Module): bugs in evsi + population file added in htm output file  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c (Module):  
   2017-04-05  Brouard Nicolas  <brouard@ined.fr>
 2006-03-20  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
         * imach.c (Module): <title> changed, corresponds to .htm file  
         name. <head> headers where missing.  2017-04-04  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): 0.98g          * imach.c: Summary: Gnuplot indexations fixed (humm)
   
         * imach.c (Module): Weights can have a decimal point as for          * imach.c:
         English (a comma might work with a correct LC_NUMERIC environment,          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
         otherwise the weight is truncated).  
         Modification of warning when the covariates values are not 0 or  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
         1.  
         Version 0.98g          * imach.c: Summary: Version 0.99r12
           Some cleanings, conformed with updated documentation.
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
   2017-03-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Comments concerning covariates added  
           * version.h: *** empty log message ***
         * noreg-setup.iss (Module): Version 0.98f  
           * version.h: Summary:0.99r11
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup  
   2017-03-29  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): refinements in the computation of lli if  
         status=-2 in order to have more reliable computation if stepm is          * imach.c: Summary: Temp
         not 1 month. Version 0.98f  
   2017-03-27  Brouard Nicolas  <brouard@ined.fr>
 2006-03-15  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: Temporary
         * imach.c (Module): Bug if status = -2, the loglikelihood was  
         computed as likelihood omitting the logarithm. Version O.98e  2017-03-08  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-14  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
   
         * imach.c (Module): varevsij Comments added explaining the second          * imach.c: Summary: Fixing data parameter line
         table of variances if popbased=1 .  
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
         (Module): Function pstamp added  
         (Module): Version 0.98d          * imach.c: Summary: 0.99 in progress
   
 2006-03-06  Brouard Nicolas  <brouard@localhost>  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Variance-covariance wrong links and          * imach.c: *** empty log message ***
         varian-covariance of ej. is needed (Saito).  
           * imach.c: Summary: not working
 2006-02-27  Brouard Nicolas  <brouard@localhost>  
   2016-09-08  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): One freematrix added in mlikeli!  
           * imach.c: Summary: continue
 2006-02-26  Brouard Nicolas  <brouard@localhost>  
   2016-09-07  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Some improvements in processing parameter  
         filename with strsep.          * imach.c: Summary: Starting values from frequencies
   
 2006-02-24  Brouard Nicolas  <brouard@localhost>          * imach.c: *** empty log message ***
   
         * imach.c (Module): Memory leaks checks with valgrind and:  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
         datafile was not closed, some imatrix were not freed and on matrix  
         allocation too.          * imach.c: *** empty log message ***
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  2016-08-30  Brouard Nicolas  <brouard@ined.fr>
   
         * strsep.c (Module): Inclusion because not in mingw32!!!          * imach.c: Summary: Fixing a lots
   
         * setup.iss.in (Module): IMACHSETUPVERSION added  2016-08-29  Brouard Nicolas  <brouard@ined.fr>
   
         * noreg-setup.iss (Module): added to cvs tree          * imach.c: Summary: gnuplot problem in Back projection to fix
   
         * Makefile (Module): IMACHSETUPVERSION added          * imach.c: Summary: Better
   
 2006-01-30  BROUARD Nicolas  <brouard@localhost>  2016-08-26  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module, Module): Latest Makefile          * imach.c:
           Summary: Improvement in Powell output in order to copy and paste
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe  
           * imach.c: Summary: Starting tests of 0.99
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  
           * imach.c: Summary: to valgrind
         * noreg-setup.iss (Module): ADDED  
   2016-08-25  Brouard Nicolas  <brouard@ined.fr>
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  
           * imach.c: *** empty log message ***
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.  
   2016-08-23  Brouard Nicolas  <brouard@ined.fr>
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  
           * imach.c: *** empty log message ***
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg  
           * imach.c: Summary: not working
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  
   2016-08-22  Brouard Nicolas  <brouard@ined.fr>
 2005-09-30    <lievre@PC_00595>  
           * imach.c: Summary: not working
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  
         (Module): If the status is missing at the last wave but we know          * imach.c: Summary: Not working
         that the person is alive, then we can code his/her status as -2  
         (instead of missing=-1 in earlier versions) and his/her  2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         contributions to the likelihood is 1 - Prob of dying from last  
         health status (= 1-p13= p11+p12 in the easiest case of somebody in          * imach.c: Summary: Completing for func too
         the healthy state at last known wave). Version is 0.98  
   2016-07-22  Brouard Nicolas  <brouard@ined.fr>
 2004-05-20  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: Fixing some arrays, still debugging
         * imach.c (Repository):  
         Agnes added a direct estimation of mortality (without the need of  2016-07-21  Brouard Nicolas  <brouard@ined.fr>
         computing period prevalence and differential mortality). Thus here  
         is version 0.97a which has been distributed to some people at          * imach.c:
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
         mortality using covariates is not done today. Estimating direct  
         mortality is a very different process because it doesn't need  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
         interpolation because it is easy to get the lx from the force of  
         the mortality mux in the simplest case as for a Gompertz (log mux          * imach.c: Summary: temp
         = a + b*x . But we have been able to incorporate the new code  
         within former imach program (0.96d) without deteriorating too much          * imach.c: Summary: saving but not running
         the understanding of the program.  
   2016-07-01  Brouard Nicolas  <brouard@ined.fr>
 2003-06-25    <brouard@BROUARD>  
           * imach.c: Summary: Fixes
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  
         exist so I changed back to asctime which exists.  2016-02-19  Brouard Nicolas  <brouard@ined.fr>
         (Module): Version 0.96b  
           * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
 2003-06-24    <brouard@BROUARD>  
           * setup.iss, Makefile, version.h: *** empty log message ***
         * imach.c (Module): Some bugs corrected for windows. Also, when  
         mle=-1 a template is output in file "or"mypar.txt with the design          * imach.c: Summary: temporary
         of the covariance matrix to be input.  
   2016-02-17  Brouard Nicolas  <brouard@ined.fr>
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  
           * imach.c: Summary: Probably last 0.98 stable version 0.98r6
         * imach.c (Repository): Duplicated warning errors corrected.  
         (Repository): Elapsed time after each iteration is now output. It  2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         helps to forecast when convergence will be reached. Elapsed time  
         is stamped in powell.  We created a new html file for the graphs          * imach.c: Summary: minor bug
         concerning matrix of covariance. It has extension -cov.htm.  
           * imach.c: Summary: 0.99r2
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  
   2016-02-15  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  
           * imach.c: *** empty log message ***
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  
   2016-02-12  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  
           * imach.c: Summary: 0.99 Back projections
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  
   2015-12-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Repository): Check when date of death was earlier that          * imach.c: Summary: Experimental backcast
         current date of interview. It may happen when the death was just  
         prior to the death. In this case, dh was negative and likelihood  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
         was wrong (infinity). We still send an "Error" but patch by  
         assuming that the date of death was just one stepm after the          * imach.c: Summary: 0.98r4 Warning and status=-2
         interview.  
         (Repository): Because some people have very long ID (first column)          Version 0.98r4 is now:
         we changed int to long in num[] and we added a new lvector for           - displaying an error when status is -1, date of interview unknown and date of death known;
         memory allocation. But we also truncated to 8 characters (left           - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         truncation)          Older changes concerning s=-2, dating from 2005 have been supersed.
   
         (Repository): No more line truncation errors.          * Makefile: *** empty log message ***
   
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Repository): Add of a routine likelione (likelihood          * Makefile: *** empty log message ***
         only once) which prints on a text file  
         (ilk) the contributions to the likelihood for each          * imach.c: Summary: 0.98r4 working
         individual/wave.  
           * Makefile: Summary: linuxrpm added
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  
         * imach.c (Repository): Replace "freqsummary" at a correct          * Makefile: *** empty log message ***
         place. It differs from routine "prevalence" which may be called  
         many times. Probs is memory consuming and must be used with          * imach.c: Summary: temporary not working
         parcimony.  
   2015-12-11  Brouard Nicolas  <brouard@ined.fr>
 2003-06-17    <brouard@BROUARD>  
           * imach.c: Summary: 0.98r4
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
   
 2003-05-16  Brouard Nicolas  <brouard@brouard>          * Makefile: *** empty log message ***
         * imach.c (Module): Insert of a warning if the delay between two  
         waves is negative.  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module):          * Makefile:
           Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
 2003-05-03    <brouard@BROUARD>  
           * imach.c: Summary: minor typo
         * imach.c: Some cleaning  
           * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
 2003-03-28    <brouard@BROUARD>  
         * imach.c (Module): In version up to 0.92 likelihood was computed          Author: Nicolas Brouard
         as if date of death was unknown. Death was treated as any other  
         health state: the date of the interview describes the actual state  2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         and not the date of a change in health state. The former idea was  
         to consider that at each interview the state was recorded          * imach.c: Summary: Start working on projected prevalences
         (healthy, disable or death) and IMaCh was corrected; but when we  
         introduced the exact date of death then we should have modified  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         the contribution of an exact death to the likelihood. This new  
         contribution is smaller and very dependent of the step unit          * imach.c: Summary: Adding ftolpl parameter
         stepm. It is no more the probability to die between last interview          Author: N Brouard
         and month of death but the probability to survive from last  
         interview up to one month before death multiplied by the          We had difficulties to get smoothed confidence intervals. It was due
         probability to die within a month. Thanks to Chris          to the period prevalence which wasn't computed accurately. The inner
         Jackson for correcting this bug.  Former versions increased          parameter ftolpl is now an outer parameter of the .imach parameter
         mortality artificially. The bad side is that we add another loop          file after estepm. If ftolpl is small 1.e-4 and estepm too,
           computation are long.
   
         which slows down the processing. The difference can be up to 10%          * version.h: *** empty log message ***
   
           * imach.c: Summary: temporary
         lower mortality.  
   2015-10-27  Brouard Nicolas  <brouard@ined.fr>
   
           * Makefile: *** empty log message ***
   
           * setup.iss.in: Summary: some new subdirs
 2002-05-30    <brouard@BROUARD>  
           * imach.c: *** empty log message ***
   
           * setup.iss.in:
           Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
   
         *  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
   
           * imach.c: *** empty log message ***
   
   2015-10-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Add correlation matrix of one-step          * imach.c:
           Summary: 0.98r3 some clarification for graphs on likelihood contributions
   
         probabilities and covariance matrix  2015-10-01  Brouard Nicolas  <brouard@ined.fr>
   
           * imach.c: Summary: Some new graphs of contribution to likelihood
   
   2015-09-30  Brouard Nicolas  <brouard@ined.fr>
   
           * Makefile:
           Summary: Version read from version.h, itself read with cmake
   
           * imach.c: Summary: looking at better estimation of the hessian
   
           Also a better criteria for convergence to the period prevalence And
           therefore adding the number of years needed to converge. (The
           prevalence in any alive state shold sum to one
   
           * Makefile: *** empty log message ***
   
   2015-09-22  Brouard Nicolas  <brouard@ined.fr>
   
           * imach.c:
           Summary: Adding some overall graph on contribution to likelihood. Might change
   
   2015-09-15  Brouard Nicolas  <brouard@ined.fr>
   
           * Makefile: *** empty log message ***
   
           * imach.c: Summary: 0.98r0
   
           - Some new graphs like survival functions
           - Some bugs fixed like model=1+age+V2.
   
           * ChangeLog, Makefile: Summary: 0.98r0
   
           * CMakeLists.txt: Summary: Some tests for setup.iss
   
   2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
           *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
   
   2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
   
           *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
   
   2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
           *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
   
   2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
   
           * imach.c (Module): Merging 1.61 to 1.162
   
   2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
   
           * prevlim.h (Module): 
   
   2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
   
           * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
           (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
   
   2010-04-29  brouard  <brouard@ined.fr>
   
           * imach.c (Module): Checking covariates for more complex models
           than V1+V2. A lot of change to be done. Unstable.
   
   2010-04-26  brouard  <brouard@ined.fr>
   
           * imach.c (Module): merging some libgsl code. Fixing computation
           of likelione (using inter/intrapolation if mle = 0) in order to
           get same likelihood as if mle=1.
           Some cleaning of code and comments added.
   
   2009-10-29  brouard  <brouard@ined.fr>
   
           * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
   
   2006-06-30  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Clarifications on computing e.j
   
   2006-04-28  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Yes the sum of survivors was wrong since
           imach-114 because nhstepm was no more computed in the age
           loop. Now we define nhstepma in the age loop.
           (Module): In order to speed up (in case of numerous covariates) we
           compute health expectancies (without variances) in a first step
           and then all the health expectancies with variances or standard
           deviation (needs data from the Hessian matrices) which slows the
           computation.
           In the future we should be able to stop the program is only health
           expectancies and graph are needed without standard deviations.
   
   2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.iss (Module): 
   
           * imach.c (Module): bugs in evsi + population file added in htm output file
   
   2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.c (Module): 
   
   2006-03-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): <title> changed, corresponds to .htm file
           name. <head> headers where missing.
   
           * Makefile (Module): 0.98g
   
           * imach.c (Module): Weights can have a decimal point as for
           English (a comma might work with a correct LC_NUMERIC environment,
           otherwise the weight is truncated).
           Modification of warning when the covariates values are not 0 or
           1. 
           Version 0.98g
   
   2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.c (Module): Comments concerning covariates added
   
           * noreg-setup.iss (Module): Version 0.98f
   
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
   
           * imach.c (Module): refinements in the computation of lli if
           status=-2 in order to have more reliable computation if stepm is
           not 1 month. Version 0.98f
   
   2006-03-15  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Bug if status = -2, the loglikelihood was
           computed as likelihood omitting the logarithm. Version O.98e
   
   2006-03-14  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): varevsij Comments added explaining the second
           table of variances if popbased=1 .
           (Module): Covariances of eij, ekl added, graphs fixed, new html link.
           (Module): Function pstamp added
           (Module): Version 0.98d 
   
   2006-03-06  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Variance-covariance wrong links and
           varian-covariance of ej. is needed (Saito).
   
   2006-02-27  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): One freematrix added in mlikeli!
   
   2006-02-26  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
   
   2006-02-24  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
   
   2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
   
           * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

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  Added in v.1.74


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