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version 1.16, 2006/02/09 14:27:24
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version 1.66, 2023/05/08 18:48:01
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| 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr>
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2023-05-08 Nicolas Brouard <brouard@ined.fr> |
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| * Makefile (Module): IMACHSETUPVERSION added
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* (Module): Error V0 when result:. and model 1+age+V1: fixed |
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| 2006-01-30 BROUARD Nicolas <brouard@localhost>
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2023-04-29 Nicolas Brouard <brouard@ined.fr> |
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| * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
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* imach.c (Module): Inverting the model equation and fixingg bugs |
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in the drawings |
| 2006-01-27 BROUARD Nicolas <brouard@localhost>
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"1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2" |
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| * noreg-setup.iss (Module): ADDED
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2023-04-24 Nicolas Brouard <brouard@ined.fr> |
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| 2006-01-24 BROUARD Nicolas <brouard@localhost>
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* imach.c (Module): some bugs in printinggnuplot |
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| * imach.c (Module): Comments (lines starting with a #) are allowed in data.
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2022-09-19 Nicolas Brouard <brouard@ined.fr> |
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| 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr>
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* imach.c (Module): Version 0.99r42 needed a newer version of |
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Gnuplot. But newer version 0.99r43 should run with the Gnuplot |
| * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
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version 5.0 or 5.1 distributed with IMaCh. |
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| * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
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2022-09-18 Nicolas Brouard <brouard@ined.fr> |
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| 2005-09-30 <lievre@PC_00595>
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* imach.c (Module): Fixing when a state in the data is 0 or higher |
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than lstate+ndeath. Fixing the plot of contribution to Likelihood. |
| * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
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| (Module): If the status is missing at the last wave but we know
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2022-09-16 Nicolas Brouard <brouard@ined.fr> |
| that the person is alive, then we can code his/her status as -2
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| (instead of missing=-1 in earlier versions) and his/her
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* imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you Feinuo |
| contributions to the likelihood is 1 - Prob of dying from last
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| health status (= 1-p13= p11+p12 in the easiest case of somebody in
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2022-09-14 Nicolas Brouard <brouard@ined.fr> |
| the healthy state at last known wave). Version is 0.98
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* imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo) |
| 2004-05-20 Brouard Nicolas <brouard@localhost>
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2022-09-14 Nicolas Brouard <brouard@ined.fr> |
| * imach.c (Repository):
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| Agnes added a direct estimation of mortality (without the need of
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* imach.c (Module): Version 0.99r39 with colored dummy covariates |
| computing period prevalence and differential mortality). Thus here
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(fixed or time varying), using new last columns of |
| is version 0.97a which has been distributed to some people at
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ILK_parameter.txt file. |
| REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
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| mortality using covariates is not done today. Estimating direct
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2022-09-11 Nicolas Brouard <brouard@ined.fr> |
| mortality is a very different process because it doesn't need
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| interpolation because it is easy to get the lx from the force of
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* imach.c (Module): Adding timevarying products of any kinds, |
| the mortality mux in the simplest case as for a Gompertz (log mux
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should work before shifting cotvar from ncovcol+nqv columns in |
| = a + b*x . But we have been able to incorporate the new code
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order to have a correspondance between the column of cotvar and |
| within former imach program (0.96d) without deteriorating too much
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the id of column. |
| the understanding of the program.
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(Module): Some cleaning and adding covariates in ILK.txt |
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| 2003-06-25 <brouard@BROUARD>
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2022-09-09 Nicolas Brouard <brouard@ined.fr> |
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| * imach.c (Module): On windows (cygwin) function asctime_r doesn't
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* imach.c (Module): Many improvements for fixing products of fixed |
| exist so I changed back to asctime which exists.
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timevarying as well as fixed * fixed, and test with quantitative |
| (Module): Version 0.96b
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covariate. |
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| 2003-06-24 <brouard@BROUARD>
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2022-09-04 Nicolas Brouard <brouard@ined.fr> |
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| * imach.c (Module): Some bugs corrected for windows. Also, when
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* imach.c (Module): Now the easy runs i.e. without result or |
| mle=-1 a template is output in file "or"mypar.txt with the design
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model=1+age only did not work. The defautl combination should be 1 |
| of the covariance matrix to be input.
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and not 0 because everything hasn't been tranformed yet. |
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| 2003-06-25 Brouard Nicolas <brouard@homebrou>
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2022-09-02 Nicolas Brouard <brouard@ined.fr> |
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| * imach.c (Repository): Duplicated warning errors corrected.
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* imach.c: Version 0.99r35 because it outputs same results with |
| (Repository): Elapsed time after each iteration is now output. It
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1+age+V1+V1*age for females and 1+age for females only |
| helps to forecast when convergence will be reached. Elapsed time
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(education=1 noweight) |
| is stamped in powell. We created a new html file for the graphs
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| concerning matrix of covariance. It has extension -cov.htm.
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2022-08-31 Nicolas Brouard <brouard@ined.fr> |
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| 2003-06-23 Brouard Nicolas <brouard@homebrou>
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* imach.c (Module): Some improvments in fichtm and many verifications 0.99r34 |
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| * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
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2022-08-21 Nicolas Brouard <brouard@ined.fr> |
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| 2003-06-18 Brouard Nicolas <brouard@homebrou>
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* imach.c (Module): Version 0.99r33 A lot of changes in |
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reassigning covariates: my first idea was that people will always |
| * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
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use the first covariate V1 into the model but in fact they are |
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producing data with many covariates and can use an equation model |
| 2003-06-17 Brouard Nicolas <brouard@homebrou>
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with some of the covariate; it means that in a model V2+V3 instead |
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of codtabm(k,Tvaraff[j]) which calculates for combination k, for |
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three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact |
| * imach.c (Repository): Check when date of death was earlier that
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the equation model is restricted to two variables only (V2, V3) |
| current date of interview. It may happen when the death was just
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and the combination for V2 should be codtabm(k,1) instead of |
| prior to the death. In this case, dh was negative and likelihood
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(codtabm(k,2), and the code should be |
| was wrong (infinity). We still send an "Error" but patch by
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codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been |
| assuming that the date of death was just one stepm after the
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made. All of these should be simplified once a day like we did in |
| interview.
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hpxij() for example by using precov[nres] which is computed in |
| (Repository): Because some people have very long ID (first column)
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decoderesult for each nres of each resultline. Loop should be done |
| we changed int to long in num[] and we added a new lvector for
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on the equation model globally by distinguishing only product with |
| memory allocation. But we also truncated to 8 characters (left
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age (which are changing with age) and no more on type of |
| truncation)
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covariates, single dummies, single covariates. |
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| (Repository): No more line truncation errors.
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2022-08-06 Nicolas Brouard <brouard@ined.fr> |
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| 2003-06-14 Brouard Nicolas <brouard@homebrou>
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* imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function |
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| * imach.c (Repository): Add of a routine likelione (likelihood
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2022-08-03 Nicolas Brouard <brouard@ined.fr> |
| only once) which prints on a text file
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| (ilk) the contributions to the likelihood for each
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* imach.c (Module): Many errors in graphs fixed with Vn*age covariates. |
| individual/wave.
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2022-07-25 Brouard Nicolas <brouard@brouard.name>
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| 2003-06-13 Brouard Nicolas <brouard@homebrou>
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| * imach.c (Repository): Replace "freqsummary" at a correct
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* imach.c (Module): Error cptcovn instead of nsd in bmij (was
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| place. It differs from routine "prevalence" which may be called
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coredumped, revealed by Feiuno, thank you.
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| many times. Probs is memory consuming and must be used with
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| parcimony.
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2022-07-23 Nicolas Brouard <brouard@ined.fr> |
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| 2003-06-17 <brouard@BROUARD>
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* r29 W and not sqrt(Wald) |
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| * timeval.h (Module): Added included file to make use of
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2022-07-22 Nicolas Brouard <brouard@ined.fr> |
| gettimeofday working on win32 with cygwin.
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* imach.c (Module): Output of Wald test in the htm file and not only in the log. |
| 2003-05-16 Brouard Nicolas <brouard@brouard>
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| * imach.c (Module): Insert of a warning if the delay between two
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2022-06-02 Brouard Nicolas <brouard@brouard.name>
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| waves is negative.
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* imach.c (Module): Adding the Wald tests from the log to the main
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| * imach.c (Module):
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htm for better display of the maximum likelihood estimators. |
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| 2003-05-03 <brouard@BROUARD>
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2022-05-30 Brouard Nicolas <brouard@brouard.name> |
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| * imach.c: Some cleaning
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* imach.c: With products of covariates (age or dummies or |
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quantitatives), estimates of parameters were good but when |
| 2003-03-28 <brouard@BROUARD>
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estimating variances the positions of newly created covariates |
| * imach.c (Module): In version up to 0.92 likelihood was computed
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were wrongly assigned and results were wrong. Thank to Feinua_Sun! |
| as if date of death was unknown. Death was treated as any other
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| health state: the date of the interview describes the actual state
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2022-05-24 Nicolas Brouard <brouard@ined.fr> |
| and not the date of a change in health state. The former idea was
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| to consider that at each interview the state was recorded
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* imach.c (Module): Some attempts to find a bug of wrong estimates |
| (healthy, disable or death) and IMaCh was corrected; but when we
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of confidencce intervals with product in the equation modelC |
| introduced the exact date of death then we should have modified
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| the contribution of an exact death to the likelihood. This new
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2022-05-15 Nicolas Brouard <brouard@ined.fr> |
| contribution is smaller and very dependent of the step unit
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| stepm. It is no more the probability to die between last interview
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* imach.c (Module): Some minor improvements |
| and month of death but the probability to survive from last
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| interview up to one month before death multiplied by the
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2022-04-13 Brouard Nicolas <brouard@brouard.name> |
| probability to die within a month. Thanks to Chris
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| Jackson for correcting this bug. Former versions increased
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* imach.c (Module): Adding link to text data files |
| mortality artificially. The bad side is that we add another loop
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2022-04-11 Nicolas Brouard <brouard@ined.fr> |
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| which slows down the processing. The difference can be up to 10%
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* imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed |
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2022-04-05 Brouard Nicolas <brouard@ined.fr> |
| lower mortality.
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* imach.c (Module): Fixed covariates (dummy or quantitative) |
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with missing values have never been allowed but are ERRORS and |
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program quits. Standard deviations of fixed covariates were |
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wrongly computed. Mean and standard deviations of time varying |
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covariates are still not computed. |
| 2002-05-30 <brouard@BROUARD>
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2022-03-17 Brouard Nicolas <brouard@ined.fr> |
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* 99r25 Improvements in fixing discrepancies between covariates |
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missing in result line but in model. |
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| *
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*Wed Mar 31 2021 Nicolas Brouard <brouard@ined.fr> |
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* imach.c (Module): Still bugs in the result loop. Thank to Holly Benett |
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*2021-03-08 Nicolas Brouard <brouard@ined.fr> |
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* ./ (Module): Fixed bug on result: |
| * imach.c (Module): Add correlation matrix of one-step
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*2021-02-20 Nicolas Brouard <brouard@ined.fr> |
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| probabilities and covariance matrix
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* imach.c (Module): Fix bug on quitting after result lines! |
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(Module): Version 0.99r21 |
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2021-02-12 Nicolas Brouard <brouard@ined.fr> |
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* imach.c (Module): The use of a Windows BOM (huge) file is now an error |
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2021-02-11 Nicolas Brouard <brouard@ined.fr> |
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* (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed. |
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2020-02-22 Brouard Nicolas <brouard@ined.fr> |
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* (Module): imach.c Update mle=-3 (for computing Life expectancy |
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and life table from the data without any state) |
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2019-05-20 Brouard Nicolas <brouard@ined.fr> |
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* version.h: Summary: version 0.99.r19 |
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* imach.c: Summary: Projection syntax simplified |
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We can now start projections, forward or backward, from the mean date |
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of inteviews up to or down to a number of years of projection: |
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prevforecast=1 yearsfproj=15.3 mobil_average=0 |
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or |
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prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0 |
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or |
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prevbackcast=1 yearsbproj=12.3 mobil_average=1 |
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or |
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prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1 |
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2019-05-18 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: doxygen tex bug |
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2019-05-16 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: There was some wrong lines added |
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2019-05-09 Brouard Nicolas <brouard@ined.fr> |
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* Makefile, imach.c: *** empty log message *** |
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* ChangeLog: Summary: C= |
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* imach.c: Summary: Some updates |
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* imach.c: Summary: Before ncovmax |
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* version.h: *** empty log message *** |
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* imach.c: Summary: 0.99r18 unlimited number of individuals |
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The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur. |
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2018-12-13 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Bug for young ages (<-30) will be in r17 |
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2018-12-05 Brouard Nicolas <brouard@ined.fr> |
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* Makefile: Summary: 0.99r16 |
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2018-05-02 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Some bugs fixed |
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2018-05-02 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Bug for young ages (<-30) will be in r17 |
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2018-05-02 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Some bugs fixed |
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2018-05-01 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: |
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Summary: Bug fixed by providing frequencies only for non missing covariates |
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2018-04-27 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: some minor bugs |
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2018-04-21 Brouard Nicolas <brouard@ined.fr> |
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* README.txt: *** empty log message *** |
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* imach.c: Summary: Some bugs fixed, valgrind tested |
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2018-04-20 Brouard Nicolas <brouard@ined.fr> |
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* Makefile, README.txt, setup.iss: Summary: imach 0.99r16 |
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* imach.c: |
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Summary: Computing mean and stdeviation of fixed quantitative variables |
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2018-04-19 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Some minor bugs fixed |
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* version.h: *** empty log message *** |
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2018-02-27 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: *** empty log message *** |
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* imach.c: Summary: Adding second argument for quitting |
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2018-02-21 Brouard Nicolas <brouard@ined.fr> |
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* Makefile, README.txt, imach.c: Summary: 0.99r15 |
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New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c |
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2017-07-20 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: temporary working |
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2017-07-19 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?) |
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2017-07-17 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: BOM files can be read now |
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2017-06-30 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Graphs improvements |
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* imach.c: Summary: Saito's color |
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2017-06-29 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Version 0.99r14 |
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2017-06-27 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: More documentation on projections |
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* imach.c: Summary: Color of backprojection changed from 6 to 5(yellow) |
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* imach.c: Summary: Some bug with rint |
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2017-05-24 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: *** empty log message *** |
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2017-05-23 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Code into subroutine, cleanings |
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2017-05-18 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: |
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Summary: backprojection and confidence intervals of backprevalence |
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2017-05-13 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: temporary save for backprojection |
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* imach.c: Summary: Version 0.99r13 (improvements and bugs fixed) |
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2017-04-26 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: imach 0.99r13 Some bugs fixed |
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* imach.c: Summary: Labels in graphs |
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2017-04-24 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: to save |
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2017-04-18 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: *** empty log message *** |
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2017-04-05 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1 |
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2017-04-04 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Gnuplot indexations fixed (humm) |
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* imach.c: |
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Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3 |
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2017-04-03 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Version 0.99r12 |
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Some cleanings, conformed with updated documentation. |
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2017-03-30 Brouard Nicolas <brouard@ined.fr> |
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* version.h: *** empty log message *** |
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* version.h: Summary:0.99r11 |
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2017-03-29 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Temp |
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2017-03-27 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: Temporary |
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2017-03-08 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed |
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* imach.c: Summary: Fixing data parameter line |
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2016-12-15 Brouard Nicolas <brouard@ined.fr> |
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* imach.c: Summary: 0.99 in progress |
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2016-09-15 Brouard Nicolas <brouard@ined.fr> |
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|
| |
* imach.c: *** empty log message *** |
| |
|
| |
* imach.c: Summary: not working |
| |
|
| |
2016-09-08 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: continue |
| |
|
| |
2016-09-07 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: Starting values from frequencies |
| |
|
| |
* imach.c: *** empty log message *** |
| |
|
| |
2016-09-02 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: *** empty log message *** |
| |
|
| |
2016-08-30 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: Fixing a lots |
| |
|
| |
2016-08-29 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: gnuplot problem in Back projection to fix |
| |
|
| |
* imach.c: Summary: Better |
| |
|
| |
2016-08-26 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: |
| |
Summary: Improvement in Powell output in order to copy and paste |
| |
|
| |
* imach.c: Summary: Starting tests of 0.99 |
| |
|
| |
* imach.c: Summary: to valgrind |
| |
|
| |
2016-08-25 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: *** empty log message *** |
| |
|
| |
2016-08-23 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: *** empty log message *** |
| |
|
| |
* imach.c: Summary: not working |
| |
|
| |
2016-08-22 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: not working |
| |
|
| |
* imach.c: Summary: Not working |
| |
|
| |
2016-07-23 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: Completing for func too |
| |
|
| |
2016-07-22 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: Fixing some arrays, still debugging |
| |
|
| |
2016-07-21 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: |
| |
Summary: 0.99 working (more or less) for Asian Workshop on multitate methods |
| |
|
| |
2016-07-12 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: temp |
| |
|
| |
* imach.c: Summary: saving but not running |
| |
|
| |
2016-07-01 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: Fixes |
| |
|
| |
2016-02-19 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7 |
| |
|
| |
* setup.iss, Makefile, version.h: *** empty log message *** |
| |
|
| |
* imach.c: Summary: temporary |
| |
|
| |
2016-02-17 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: Probably last 0.98 stable version 0.98r6 |
| |
|
| |
2016-02-16 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: minor bug |
| |
|
| |
* imach.c: Summary: 0.99r2 |
| |
|
| |
2016-02-15 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: *** empty log message *** |
| |
|
| |
2016-02-12 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: 0.99 Back projections |
| |
|
| |
2015-12-23 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: Experimental backcast |
| |
|
| |
2015-12-18 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: 0.98r4 Warning and status=-2 |
| |
|
| |
Version 0.98r4 is now: |
| |
- displaying an error when status is -1, date of interview unknown and date of death known; |
| |
- permitting a status -2 when the vital status is unknown at a known date of right truncation. |
| |
Older changes concerning s=-2, dating from 2005 have been supersed. |
| |
|
| |
* Makefile: *** empty log message *** |
| |
|
| |
2015-12-16 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* Makefile: *** empty log message *** |
| |
|
| |
* imach.c: Summary: 0.98r4 working |
| |
|
| |
* Makefile: Summary: linuxrpm added |
| |
|
| |
* Makefile: *** empty log message *** |
| |
|
| |
* imach.c: Summary: temporary not working |
| |
|
| |
2015-12-11 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: 0.98r4 |
| |
|
| |
2015-12-08 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* Makefile: *** empty log message *** |
| |
|
| |
2015-11-21 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* Makefile: |
| |
Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more |
| |
|
| |
* imach.c: Summary: minor typo |
| |
|
| |
* imach.c: Summary: 0.98r3 with some graph of projected cross-sectional |
| |
|
| |
Author: Nicolas Brouard |
| |
|
| |
2015-11-18 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: Start working on projected prevalences |
| |
|
| |
2015-11-17 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: Adding ftolpl parameter |
| |
Author: N Brouard |
| |
|
| |
We had difficulties to get smoothed confidence intervals. It was due |
| |
to the period prevalence which wasn't computed accurately. The inner |
| |
parameter ftolpl is now an outer parameter of the .imach parameter |
| |
file after estepm. If ftolpl is small 1.e-4 and estepm too, |
| |
computation are long. |
| |
|
| |
* version.h: *** empty log message *** |
| |
|
| |
* imach.c: Summary: temporary |
| |
|
| |
2015-10-27 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* Makefile: *** empty log message *** |
| |
|
| |
* setup.iss.in: Summary: some new subdirs |
| |
|
| |
* imach.c: *** empty log message *** |
| |
|
| |
* setup.iss.in: |
| |
Summary: Adding gnuplot 5.1 with bin and etc for pango fonts |
| |
|
| |
2015-10-24 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: *** empty log message *** |
| |
|
| |
2015-10-23 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: |
| |
Summary: 0.98r3 some clarification for graphs on likelihood contributions |
| |
|
| |
2015-10-01 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: Summary: Some new graphs of contribution to likelihood |
| |
|
| |
2015-09-30 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* Makefile: |
| |
Summary: Version read from version.h, itself read with cmake |
| |
|
| |
* imach.c: Summary: looking at better estimation of the hessian |
| |
|
| |
Also a better criteria for convergence to the period prevalence And |
| |
therefore adding the number of years needed to converge. (The |
| |
prevalence in any alive state shold sum to one |
| |
|
| |
* Makefile: *** empty log message *** |
| |
|
| |
2015-09-22 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* imach.c: |
| |
Summary: Adding some overall graph on contribution to likelihood. Might change |
| |
|
| |
2015-09-15 Brouard Nicolas <brouard@ined.fr> |
| |
|
| |
* Makefile: *** empty log message *** |
| |
|
| |
* imach.c: Summary: 0.98r0 |
| |
|
| |
- Some new graphs like survival functions |
| |
- Some bugs fixed like model=1+age+V2. |
| |
|
| |
* ChangeLog, Makefile: Summary: 0.98r0 |
| |
|
| |
* CMakeLists.txt: Summary: Some tests for setup.iss |
| |
|
| |
2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr> |
| |
|
| |
* (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc |
| |
|
| |
2015-08-18 Nicolas J Brouard <nbrouard@tugault.local> |
| |
|
| |
* (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line. |
| |
|
| |
2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr> |
| |
|
| |
* (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih) |
| |
|
| |
2014-12-16 Nicolas J Brouard <nbrouard@tugault.local> |
| |
|
| |
* imach.c (Module): Merging 1.61 to 1.162 |
| |
|
| |
2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr> |
| |
|
| |
* prevlim.h (Module): |
| |
|
| |
2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local> |
| |
|
| |
* imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested... |
| |
(Module): Version 0.98nR Running ok, but output format still only works for three covariates. |
| |
|
| |
2010-04-29 brouard <brouard@ined.fr> |
| |
|
| |
* imach.c (Module): Checking covariates for more complex models |
| |
than V1+V2. A lot of change to be done. Unstable. |
| |
|
| |
2010-04-26 brouard <brouard@ined.fr> |
| |
|
| |
* imach.c (Module): merging some libgsl code. Fixing computation |
| |
of likelione (using inter/intrapolation if mle = 0) in order to |
| |
get same likelihood as if mle=1. |
| |
Some cleaning of code and comments added. |
| |
|
| |
2009-10-29 brouard <brouard@ined.fr> |
| |
|
| |
* imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code. |
| |
|
| |
2006-06-30 Brouard Nicolas <brouard@localhost> |
| |
|
| |
* imach.c (Module): Clarifications on computing e.j |
| |
|
| |
2006-04-28 Brouard Nicolas <brouard@localhost> |
| |
|
| |
* imach.c (Module): Yes the sum of survivors was wrong since |
| |
imach-114 because nhstepm was no more computed in the age |
| |
loop. Now we define nhstepma in the age loop. |
| |
(Module): In order to speed up (in case of numerous covariates) we |
| |
compute health expectancies (without variances) in a first step |
| |
and then all the health expectancies with variances or standard |
| |
deviation (needs data from the Hessian matrices) which slows the |
| |
computation. |
| |
In the future we should be able to stop the program is only health |
| |
expectancies and graph are needed without standard deviations. |
| |
|
| |
2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr> |
| |
|
| |
* imach.iss (Module): |
| |
|
| |
* imach.c (Module): bugs in evsi + population file added in htm output file |
| |
|
| |
2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr> |
| |
|
| |
* imach.c (Module): |
| |
|
| |
2006-03-20 Brouard Nicolas <brouard@localhost> |
| |
|
| |
* imach.c (Module): <title> changed, corresponds to .htm file |
| |
name. <head> headers where missing. |
| |
|
| |
* Makefile (Module): 0.98g |
| |
|
| |
* imach.c (Module): Weights can have a decimal point as for |
| |
English (a comma might work with a correct LC_NUMERIC environment, |
| |
otherwise the weight is truncated). |
| |
Modification of warning when the covariates values are not 0 or |
| |
1. |
| |
Version 0.98g |
| |
|
| |
2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr> |
| |
|
| |
* imach.c (Module): Comments concerning covariates added |
| |
|
| |
* noreg-setup.iss (Module): Version 0.98f |
| |
|
| |
* Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup |
| |
|
| |
* imach.c (Module): refinements in the computation of lli if |
| |
status=-2 in order to have more reliable computation if stepm is |
| |
not 1 month. Version 0.98f |
| |
|
| |
2006-03-15 Brouard Nicolas <brouard@localhost> |
| |
|
| |
* imach.c (Module): Bug if status = -2, the loglikelihood was |
| |
computed as likelihood omitting the logarithm. Version O.98e |
| |
|
| |
2006-03-14 Brouard Nicolas <brouard@localhost> |
| |
|
| |
* imach.c (Module): varevsij Comments added explaining the second |
| |
table of variances if popbased=1 . |
| |
(Module): Covariances of eij, ekl added, graphs fixed, new html link. |
| |
(Module): Function pstamp added |
| |
(Module): Version 0.98d |
| |
|
| |
2006-03-06 Brouard Nicolas <brouard@localhost> |
| |
|
| |
* imach.c (Module): Variance-covariance wrong links and |
| |
varian-covariance of ej. is needed (Saito). |
| |
|
| |
2006-02-27 Brouard Nicolas <brouard@localhost> |
| |
|
| |
* imach.c (Module): One freematrix added in mlikeli! |
| |
|
| |
2006-02-26 Brouard Nicolas <brouard@localhost> |
| |
|
| |
* imach.c (Module): Some improvements in processing parameter |
| |
filename with strsep. |
| |
|
| |
2006-02-24 Brouard Nicolas <brouard@localhost> |
| |
|
| |
* imach.c (Module): Memory leaks checks with valgrind and: |
| |
datafile was not closed, some imatrix were not freed and on matrix |
| |
allocation too. |
| |
|
| |
2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr> |
| |
|
| |
* strsep.c (Module): Inclusion because not in mingw32!!! |
| |
|
| |
* setup.iss.in (Module): IMACHSETUPVERSION added |
| |
|
| |
* noreg-setup.iss (Module): added to cvs tree |
| |
|
| |
* Makefile (Module): IMACHSETUPVERSION added |
| |
|
| |
2006-01-30 BROUARD Nicolas <brouard@localhost> |
| |
|
| |
* Makefile (Module, Module): Latest Makefile |
| |
|
| |
* imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe |
| |
|
| |
2006-01-27 BROUARD Nicolas <brouard@localhost> |
| |
|
| |
* noreg-setup.iss (Module): ADDED |
| |
|
| |
2006-01-24 BROUARD Nicolas <brouard@localhost> |
| |
|
| |
* imach.c (Module): Comments (lines starting with a #) are allowed in data. |
| |
|
| |
2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr> |
| |
|
| |
* Makefile (Module): Added Imach98.pmsp and howto crete a dmg |
| |
|
| |
* createdmg.sh (Module): Creates a dmg disk for MaC OS/X |
| |
|
| |
2005-09-30 <lievre@PC_00595> |
| |
|
| |
* imach.c (Module): sump fixed, loop imx fixed, and simplifications. |
| |
(Module): If the status is missing at the last wave but we know |
| |
that the person is alive, then we can code his/her status as -2 |
| |
(instead of missing=-1 in earlier versions) and his/her |
| |
contributions to the likelihood is 1 - Prob of dying from last |
| |
health status (= 1-p13= p11+p12 in the easiest case of somebody in |
| |
the healthy state at last known wave). Version is 0.98 |
| |
|
| |
2004-05-20 Brouard Nicolas <brouard@localhost> |
| |
|
| |
* imach.c (Repository): |
| |
Agnes added a direct estimation of mortality (without the need of |
| |
computing period prevalence and differential mortality). Thus here |
| |
is version 0.97a which has been distributed to some people at |
| |
REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of |
| |
mortality using covariates is not done today. Estimating direct |
| |
mortality is a very different process because it doesn't need |
| |
interpolation because it is easy to get the lx from the force of |
| |
the mortality mux in the simplest case as for a Gompertz (log mux |
| |
= a + b*x . But we have been able to incorporate the new code |
| |
within former imach program (0.96d) without deteriorating too much |
| |
the understanding of the program. |
| |
|
| |
2003-06-25 <brouard@BROUARD> |
| |
|
| |
* imach.c (Module): On windows (cygwin) function asctime_r doesn't |
| |
exist so I changed back to asctime which exists. |
| |
(Module): Version 0.96b |
| |
|
| |
2003-06-24 <brouard@BROUARD> |
| |
|
| |
* imach.c (Module): Some bugs corrected for windows. Also, when |
| |
mle=-1 a template is output in file "or"mypar.txt with the design |
| |
of the covariance matrix to be input. |
| |
|
| |
2003-06-25 Brouard Nicolas <brouard@homebrou> |
| |
|
| |
* imach.c (Repository): Duplicated warning errors corrected. |
| |
(Repository): Elapsed time after each iteration is now output. It |
| |
helps to forecast when convergence will be reached. Elapsed time |
| |
is stamped in powell. We created a new html file for the graphs |
| |
concerning matrix of covariance. It has extension -cov.htm. |
| |
|
| |
2003-06-23 Brouard Nicolas <brouard@homebrou> |
| |
|
| |
* imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things. |
| |
|
| |
2003-06-18 Brouard Nicolas <brouard@homebrou> |
| |
|
| |
* imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96 |
| |
|
| |
2003-06-17 Brouard Nicolas <brouard@homebrou> |
| |
|
| |
|
| |
* imach.c (Repository): Check when date of death was earlier that |
| |
current date of interview. It may happen when the death was just |
| |
prior to the death. In this case, dh was negative and likelihood |
| |
was wrong (infinity). We still send an "Error" but patch by |
| |
assuming that the date of death was just one stepm after the |
| |
interview. |
| |
(Repository): Because some people have very long ID (first column) |
| |
we changed int to long in num[] and we added a new lvector for |
| |
memory allocation. But we also truncated to 8 characters (left |
| |
truncation) |
| |
|
| |
(Repository): No more line truncation errors. |
| |
|
| |
2003-06-14 Brouard Nicolas <brouard@homebrou> |
| |
|
| |
* imach.c (Repository): Add of a routine likelione (likelihood |
| |
only once) which prints on a text file |
| |
(ilk) the contributions to the likelihood for each |
| |
individual/wave. |
| |
|
| |
2003-06-13 Brouard Nicolas <brouard@homebrou> |
| |
* imach.c (Repository): Replace "freqsummary" at a correct |
| |
place. It differs from routine "prevalence" which may be called |
| |
many times. Probs is memory consuming and must be used with |
| |
parcimony. |
| |
|
| |
2003-06-17 <brouard@BROUARD> |
| |
|
| |
* timeval.h (Module): Added included file to make use of |
| |
gettimeofday working on win32 with cygwin. |
| |
|
| |
2003-05-16 Brouard Nicolas <brouard@brouard> |
| |
* imach.c (Module): Insert of a warning if the delay between two |
| |
waves is negative. |
| |
|
| |
* imach.c (Module): |
| |
|
| |
2003-05-03 <brouard@BROUARD> |
| |
|
| |
* imach.c: Some cleaning |
| |
|
| |
2003-03-28 <brouard@BROUARD> |
| |
* imach.c (Module): In version up to 0.92 likelihood was computed |
| |
as if date of death was unknown. Death was treated as any other |
| |
health state: the date of the interview describes the actual state |
| |
and not the date of a change in health state. The former idea was |
| |
to consider that at each interview the state was recorded |
| |
(healthy, disable or death) and IMaCh was corrected; but when we |
| |
introduced the exact date of death then we should have modified |
| |
the contribution of an exact death to the likelihood. This new |
| |
contribution is smaller and very dependent of the step unit |
| |
stepm. It is no more the probability to die between last interview |
| |
and month of death but the probability to survive from last |
| |
interview up to one month before death multiplied by the |
| |
probability to die within a month. Thanks to Chris |
| |
Jackson for correcting this bug. Former versions increased |
| |
mortality artificially. The bad side is that we add another loop |
| |
which slows down the processing. The difference can be up to 10% |
| |
lower mortality. |
| |
|
| |
2002-05-30 <brouard@BROUARD> |
| |
|
| |
* imach.c (Module): Add correlation matrix of one-step |
| |
probabilities and covariance matrix |
| |
|
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