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version 1.38, 2019/05/09 15:06:14 version 1.54, 2022/07/23 17:43:46
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 2018-05-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed          * r29 W and not sqrt(Wald)
   
 2018-05-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-07-22  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
         Summary: Bug fixed by providing frequencies only for non missing covariates  
   2022-05-30  Brouard Nicolas  <brouard@brouard.name>
 2018-04-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: With products of covariates (age or dummies or
         * imach.c: Summary: some minor bugs          quantitatives), estimates of parameters were good but when
           estimating variances the positions of newly created covariates
 2018-04-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          were wrongly assigned and results were wrong. Thank to Feinua_Sun!
   
         * README.txt: *** empty log message ***  2022-05-24  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed, valgrind tested          * imach.c (Module): Some attempts to find a bug of wrong estimates
           of confidencce intervals with product in the equation modelC
 2018-04-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-05-15  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  
           * imach.c (Module):  Some minor improvements
         * imach.c:  
         Summary: Computing mean and stdeviation of fixed quantitative variables  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
   
 2018-04-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Adding link to text data files
   
         * imach.c: Summary: Some minor bugs fixed  2022-04-11  Nicolas Brouard   <brouard@ined.fr>
   
         * version.h: *** empty log message ***          * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
   
 2018-02-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-04-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c (Module): Fixed covariates (dummy or quantitative)
           with missing values have never been allowed but are ERRORS and
         * imach.c: Summary: Adding second argument for quitting          program quits. Standard deviations of fixed covariates were
           wrongly computed. Mean and standard deviations of time varying
 2018-02-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          covariates are still not computed.
   
         * Makefile, README.txt, imach.c: Summary: 0.99r15  2022-03-17  Brouard Nicolas  <brouard@ined.fr>
   
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          * 99r25 Improvements in fixing discrepancies between covariates
           missing in result line but in model. 
 2017-07-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: temporary working          * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
   
 2017-07-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)          * ./ (Module): Fixed bug on result:
   
 2017-07-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: BOM files can be read now          * imach.c (Module): Fix bug on quitting after result lines!
           (Module): Version 0.99r21
 2017-06-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2021-02-12  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Graphs improvements  
           * imach.c (Module): The use of a Windows BOM (huge) file is now an error
         * imach.c: Summary: Saito's color  
   
 2017-06-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Version 0.99r14          *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
   
 2017-06-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2020-02-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: More documentation on projections          *  (Module): imach.c Update mle=-3 (for computing Life expectancy
           and life table from the data without any state)
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)  
   2019-05-20  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Some bug with rint  
           * version.h: Summary: version 0.99.r19
 2017-05-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Projection syntax simplified
         * imach.c: *** empty log message ***          We can now start projections, forward or backward, from the mean date
           of inteviews up to or down to a number of years of projection:
 2017-05-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          prevforecast=1 yearsfproj=15.3 mobil_average=0
           or
         * imach.c: Summary: Code into subroutine, cleanings          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
           or
 2017-05-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
         * imach.c:          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
         Summary: backprojection and confidence intervals of backprevalence  
   2019-05-18  Brouard Nicolas  <brouard@ined.fr>
 2017-05-13  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: doxygen tex bug
         * imach.c: Summary: temporary save for backprojection  
   2019-05-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)  
           * imach.c: Summary: There was some wrong lines added
 2017-04-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2019-05-09  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: imach 0.99r13 Some bugs fixed  
           * Makefile, imach.c: *** empty log message ***
         * imach.c: Summary: Labels in graphs  
           * ChangeLog: Summary: C=
 2017-04-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Some updates
         * imach.c: Summary: to save  
           * imach.c: Summary: Before ncovmax
 2017-04-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * version.h: *** empty log message ***
         * imach.c: *** empty log message ***  
           * imach.c: Summary: 0.99r18 unlimited number of individuals
 2017-04-05  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-04  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Bug for young ages (<-30) will be in r17
   
         * imach.c: Summary: Gnuplot indexations fixed (humm)  2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * Makefile: Summary: 0.99r16
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2017-04-03  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Some bugs fixed
         * imach.c: Summary: Version 0.99r12  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         Some cleanings, conformed with updated documentation.  
           * imach.c:  Summary: Bug for young ages (<-30) will be in r17
 2017-03-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * version.h: *** empty log message ***  
           * imach.c: Summary: Some bugs fixed
         * version.h: Summary:0.99r11  
   2018-05-01  Brouard Nicolas  <brouard@ined.fr>
 2017-03-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c:
         * imach.c: Summary: Temp          Summary: Bug fixed by providing frequencies only for non missing covariates
   
 2017-03-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-04-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Temporary          * imach.c: Summary: some minor bugs
   
 2017-03-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed          * README.txt: *** empty log message ***
   
         * imach.c: Summary: Fixing data parameter line          * imach.c: Summary: Some bugs fixed, valgrind tested
   
 2016-12-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99 in progress          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
 2016-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
         * imach.c: *** empty log message ***  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: not working  
           * imach.c: Summary: Some minor bugs fixed
 2016-09-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * version.h: *** empty log message ***
         * imach.c: Summary: continue  
   2018-02-27  Brouard Nicolas  <brouard@ined.fr>
 2016-09-07  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: *** empty log message ***
         * imach.c: Summary: Starting values from frequencies  
           * imach.c: Summary: Adding second argument for quitting
         * imach.c: *** empty log message ***  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
 2016-09-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
         * imach.c: *** empty log message ***          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
 2016-08-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixing a lots          * imach.c: Summary: temporary working
   
 2016-08-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-07-19  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: gnuplot problem in Back projection to fix          * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
   
         * imach.c: Summary: Better  2017-07-17  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: BOM files can be read now
   
         * imach.c:  2017-06-30  Brouard Nicolas  <brouard@ined.fr>
         Summary: Improvement in Powell output in order to copy and paste  
           * imach.c: Summary: Graphs improvements
         Author:  
           * imach.c: Summary: Saito's color
         * imach.c: Summary: Starting tests of 0.99  
   2017-06-29  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: to valgrind  
           * imach.c: Summary: Version 0.99r14
 2016-08-25  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-06-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: More documentation on projections
 2016-08-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Some bug with rint
         * imach.c: Summary: not working  
   2017-05-24  Brouard Nicolas  <brouard@ined.fr>
 2016-08-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: *** empty log message ***
         * imach.c: Summary: not working  
   2017-05-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Not working  
           * imach.c: Summary: Code into subroutine, cleanings
 2016-07-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-05-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Completing for func too  
           * imach.c:
 2016-07-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          Summary: backprojection and confidence intervals of backprevalence
   
         * imach.c: Summary: Fixing some arrays, still debugging  2017-05-13  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: temporary save for backprojection
   
         * imach.c:          * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  
   2017-04-26  Brouard Nicolas  <brouard@ined.fr>
 2016-07-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
         * imach.c: Summary: temp  
           * imach.c: Summary: Labels in graphs
         * imach.c: Summary: saving but not running  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
 2016-07-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: to save
         * imach.c: Summary: Fixes  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
 2016-02-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: *** empty log message ***
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  
   2017-04-05  Brouard Nicolas  <brouard@ined.fr>
         * setup.iss, Makefile, version.h: *** empty log message ***  
           * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
         * imach.c: Summary: temporary  
   2017-04-04  Brouard Nicolas  <brouard@ined.fr>
 2016-02-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Gnuplot indexations fixed (humm)
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
           * imach.c:
 2016-02-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
   
         * imach.c: Summary: minor bug  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99r2          * imach.c: Summary: Version 0.99r12
           Some cleanings, conformed with updated documentation.
 2016-02-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-03-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * version.h: *** empty log message ***
 2016-02-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * version.h: Summary:0.99r11
         * imach.c: Summary: 0.99 Back projections  
   2017-03-29  Brouard Nicolas  <brouard@ined.fr>
 2015-12-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Temp
         * imach.c: Summary: Experimental backcast  
   2017-03-27  Brouard Nicolas  <brouard@ined.fr>
 2015-12-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Temporary
         * imach.c: Summary: 0.98r4 Warning and status=-2  
   2017-03-08  Brouard Nicolas  <brouard@ined.fr>
         Version 0.98r4 is now:  
          - displaying an error when status is -1, date of interview unknown and date of death known;          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.          * imach.c: Summary: Fixing data parameter line
   
         * Makefile: *** empty log message ***  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: 0.99 in progress
   
         * Makefile: *** empty log message ***  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4 working          * imach.c: *** empty log message ***
   
         * Makefile: Summary: linuxrpm added          * imach.c: Summary: not working
   
         * Makefile: *** empty log message ***  2016-09-08  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temporary not working          * imach.c: Summary: continue
   
 2015-12-11  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2016-09-07  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4          * imach.c: Summary: Starting values from frequencies
   
 2015-12-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: *** empty log message ***
   
         * Makefile: *** empty log message ***  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
   
 2015-11-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: *** empty log message ***
   
         * Makefile:  2016-08-30  Brouard Nicolas  <brouard@ined.fr>
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  
           * imach.c: Summary: Fixing a lots
         * imach.c: Summary: minor typo  
   2016-08-29  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
           * imach.c: Summary: gnuplot problem in Back projection to fix
         Author: Nicolas Brouard  
           * imach.c: Summary: Better
 2015-11-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Start working on projected prevalences  
           * imach.c:
 2015-11-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          Summary: Improvement in Powell output in order to copy and paste
   
         * imach.c: Summary: Adding ftolpl parameter          * imach.c: Summary: Starting tests of 0.99
         Author: N Brouard  
           * imach.c: Summary: to valgrind
         We had difficulties to get smoothed confidence intervals. It was due  
         to the period prevalence which wasn't computed accurately. The inner  2016-08-25  Brouard Nicolas  <brouard@ined.fr>
         parameter ftolpl is now an outer parameter of the .imach parameter  
         file after estepm. If ftolpl is small 1.e-4 and estepm too,          * imach.c: *** empty log message ***
         computation are long.  
   2016-08-23  Brouard Nicolas  <brouard@ined.fr>
         * version.h: *** empty log message ***  
           * imach.c: *** empty log message ***
         * imach.c: Summary: temporary  
           * imach.c: Summary: not working
 2015-10-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2016-08-22  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: not working
         * setup.iss.in: Summary: some new subdirs  
           * imach.c: Summary: Not working
         * imach.c: *** empty log message ***  
   2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         * setup.iss.in:  
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts          * imach.c: Summary: Completing for func too
   
 2015-10-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2016-07-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Fixing some arrays, still debugging
   
 2015-10-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2016-07-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c:
         Summary: 0.98r3 some clarification for graphs on likelihood contributions          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
   
 2015-10-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Some new graphs of contribution to likelihood          * imach.c: Summary: temp
   
 2015-09-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: saving but not running
   
         * Makefile:  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
         Summary: Version read from version.h, itself read with cmake  
           * imach.c: Summary: Fixes
         * imach.c: Summary: looking at better estimation of the hessian  
   2016-02-19  Brouard Nicolas  <brouard@ined.fr>
         Also a better criteria for convergence to the period prevalence And  
         therefore adding the number of years needed to converge. (The          * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
         prevalence in any alive state shold sum to one  
           * setup.iss, Makefile, version.h: *** empty log message ***
         * Makefile: *** empty log message ***  
           * imach.c: Summary: temporary
 2015-09-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2016-02-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: Adding some overall graph on contribution to likelihood. Might change          * imach.c: Summary: Probably last 0.98 stable version 0.98r6
   
 2015-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2016-02-16  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: minor bug
   
         * imach.c: Summary: 0.98r0          * imach.c: Summary: 0.99r2
   
         - Some new graphs like suvival functions  2016-02-15  Brouard Nicolas  <brouard@ined.fr>
         - Some bugs fixed like model=1+age+V2.  
           * imach.c: *** empty log message ***
         * ChangeLog, Makefile: Summary: 0.98r0  
   2016-02-12  Brouard Nicolas  <brouard@ined.fr>
         * CMakeLists.txt: Summary: Some tests for setup.iss  
           * imach.c: Summary: 0.99 Back projections
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
   2015-12-23  Brouard Nicolas  <brouard@ined.fr>
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  
           * imach.c: Summary: Experimental backcast
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  
   2015-12-18  Brouard Nicolas  <brouard@ined.fr>
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.  
           * imach.c: Summary: 0.98r4 Warning and status=-2
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
           Version 0.98r4 is now:
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)           - displaying an error when status is -1, date of interview unknown and date of death known;
            - permitting a status -2 when the vital status is unknown at a known date of right truncation.
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>          Older changes concerning s=-2, dating from 2005 have been supersed.
   
         * imach.c (Module): Merging 1.61 to 1.162          * Makefile: *** empty log message ***
   
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
   
         * prevlim.h (Module):          * Makefile: *** empty log message ***
   
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>          * imach.c: Summary: 0.98r4 working
   
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...          * Makefile: Summary: linuxrpm added
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
           * Makefile: *** empty log message ***
 2010-04-29  brouard  <brouard@ined.fr>  
           * imach.c: Summary: temporary not working
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
   
 2010-04-26  brouard  <brouard@ined.fr>          * imach.c: Summary: 0.98r4
   
         * imach.c (Module): merging some libgsl code. Fixing computation  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
         of likelione (using inter/intrapolation if mle = 0) in order to  
         get same likelihood as if mle=1.          * Makefile: *** empty log message ***
         Some cleaning of code and comments added.  
   2015-11-21  Brouard Nicolas  <brouard@ined.fr>
 2009-10-29  brouard  <brouard@ined.fr>  
           * Makefile:
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.          Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
   
 2006-06-30  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: minor typo
   
         * imach.c (Module): Clarifications on computing e.j          * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
   
 2006-04-28  Brouard Nicolas  <brouard@localhost>          Author: Nicolas Brouard
   
         * imach.c (Module): Yes the sum of survivors was wrong since  2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         imach-114 because nhstepm was no more computed in the age  
         loop. Now we define nhstepma in the age loop.          * imach.c: Summary: Start working on projected prevalences
         (Module): In order to speed up (in case of numerous covariates) we  
         compute health expectancies (without variances) in a first step  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         and then all the health expectancies with variances or standard  
         deviation (needs data from the Hessian matrices) which slows the          * imach.c: Summary: Adding ftolpl parameter
         computation.          Author: N Brouard
         In the future we should be able to stop the program is only health  
         expectancies and graph are needed without standard deviations.          We had difficulties to get smoothed confidence intervals. It was due
           to the period prevalence which wasn't computed accurately. The inner
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          parameter ftolpl is now an outer parameter of the .imach parameter
           file after estepm. If ftolpl is small 1.e-4 and estepm too,
         * imach.iss (Module):          computation are long.
   
         * imach.c (Module): bugs in evsi + population file added in htm output file          * version.h: *** empty log message ***
   
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: Summary: temporary
   
         * imach.c (Module):  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-20  Brouard Nicolas  <brouard@localhost>          * Makefile: *** empty log message ***
   
         * imach.c (Module): <title> changed, corresponds to .htm file          * setup.iss.in: Summary: some new subdirs
         name. <head> headers where missing.  
           * imach.c: *** empty log message ***
         * Makefile (Module): 0.98g  
           * setup.iss.in:
         * imach.c (Module): Weights can have a decimal point as for          Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         English (a comma might work with a correct LC_NUMERIC environment,  
         otherwise the weight is truncated).  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
         Modification of warning when the covariates values are not 0 or  
         1.          * imach.c: *** empty log message ***
         Version 0.98g  
   2015-10-23  Brouard Nicolas  <brouard@ined.fr>
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c:
         * imach.c (Module): Comments concerning covariates added          Summary: 0.98r3 some clarification for graphs on likelihood contributions
   
         * noreg-setup.iss (Module): Version 0.98f  2015-10-01  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup          * imach.c: Summary: Some new graphs of contribution to likelihood
   
         * imach.c (Module): refinements in the computation of lli if  2015-09-30  Brouard Nicolas  <brouard@ined.fr>
         status=-2 in order to have more reliable computation if stepm is  
         not 1 month. Version 0.98f          * Makefile:
           Summary: Version read from version.h, itself read with cmake
 2006-03-15  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: looking at better estimation of the hessian
         * imach.c (Module): Bug if status = -2, the loglikelihood was  
         computed as likelihood omitting the logarithm. Version O.98e          Also a better criteria for convergence to the period prevalence And
           therefore adding the number of years needed to converge. (The
 2006-03-14  Brouard Nicolas  <brouard@localhost>          prevalence in any alive state shold sum to one
   
         * imach.c (Module): varevsij Comments added explaining the second          * Makefile: *** empty log message ***
         table of variances if popbased=1 .  
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  2015-09-22  Brouard Nicolas  <brouard@ined.fr>
         (Module): Function pstamp added  
         (Module): Version 0.98d          * imach.c:
           Summary: Adding some overall graph on contribution to likelihood. Might change
 2006-03-06  Brouard Nicolas  <brouard@localhost>  
   2015-09-15  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Variance-covariance wrong links and  
         varian-covariance of ej. is needed (Saito).          * Makefile: *** empty log message ***
   
 2006-02-27  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: 0.98r0
   
         * imach.c (Module): One freematrix added in mlikeli!          - Some new graphs like survival functions
           - Some bugs fixed like model=1+age+V2.
 2006-02-26  Brouard Nicolas  <brouard@localhost>  
           * ChangeLog, Makefile: Summary: 0.98r0
         * imach.c (Module): Some improvements in processing parameter  
         filename with strsep.          * CMakeLists.txt: Summary: Some tests for setup.iss
   
 2006-02-24  Brouard Nicolas  <brouard@localhost>  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * imach.c (Module): Memory leaks checks with valgrind and:          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
         datafile was not closed, some imatrix were not freed and on matrix  
         allocation too.  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
   
         * strsep.c (Module): Inclusion because not in mingw32!!!  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * setup.iss.in (Module): IMACHSETUPVERSION added          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
   
         * noreg-setup.iss (Module): added to cvs tree  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
   
         * Makefile (Module): IMACHSETUPVERSION added          * imach.c (Module): Merging 1.61 to 1.162
   
 2006-01-30  BROUARD Nicolas  <brouard@localhost>  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
   
         * Makefile (Module, Module): Latest Makefile          * prevlim.h (Module): 
   
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
   
 2006-01-27  BROUARD Nicolas  <brouard@localhost>          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
           (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
         * noreg-setup.iss (Module): ADDED  
   2010-04-29  brouard  <brouard@ined.fr>
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  
           * imach.c (Module): Checking covariates for more complex models
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          than V1+V2. A lot of change to be done. Unstable.
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  2010-04-26  brouard  <brouard@ined.fr>
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          * imach.c (Module): merging some libgsl code. Fixing computation
           of likelione (using inter/intrapolation if mle = 0) in order to
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X          get same likelihood as if mle=1.
           Some cleaning of code and comments added.
 2005-09-30    <lievre@PC_00595>  
   2009-10-29  brouard  <brouard@ined.fr>
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  
         (Module): If the status is missing at the last wave but we know          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
         that the person is alive, then we can code his/her status as -2  
         (instead of missing=-1 in earlier versions) and his/her  2006-06-30  Brouard Nicolas  <brouard@localhost>
         contributions to the likelihood is 1 - Prob of dying from last  
         health status (= 1-p13= p11+p12 in the easiest case of somebody in          * imach.c (Module): Clarifications on computing e.j
         the healthy state at last known wave). Version is 0.98  
   2006-04-28  Brouard Nicolas  <brouard@localhost>
 2004-05-20  Brouard Nicolas  <brouard@localhost>  
           * imach.c (Module): Yes the sum of survivors was wrong since
         * imach.c (Repository):          imach-114 because nhstepm was no more computed in the age
         Agnes added a direct estimation of mortality (without the need of          loop. Now we define nhstepma in the age loop.
         computing period prevalence and differential mortality). Thus here          (Module): In order to speed up (in case of numerous covariates) we
         is version 0.97a which has been distributed to some people at          compute health expectancies (without variances) in a first step
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of          and then all the health expectancies with variances or standard
         mortality using covariates is not done today. Estimating direct          deviation (needs data from the Hessian matrices) which slows the
         mortality is a very different process because it doesn't need          computation.
         interpolation because it is easy to get the lx from the force of          In the future we should be able to stop the program is only health
         the mortality mux in the simplest case as for a Gompertz (log mux          expectancies and graph are needed without standard deviations.
         = a + b*x . But we have been able to incorporate the new code  
         within former imach program (0.96d) without deteriorating too much  2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         the understanding of the program.  
           * imach.iss (Module): 
 2003-06-25    <brouard@BROUARD>  
           * imach.c (Module): bugs in evsi + population file added in htm output file
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  
         exist so I changed back to asctime which exists.  2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         (Module): Version 0.96b  
           * imach.c (Module): 
 2003-06-24    <brouard@BROUARD>  
   2006-03-20  Brouard Nicolas  <brouard@localhost>
         * imach.c (Module): Some bugs corrected for windows. Also, when  
         mle=-1 a template is output in file "or"mypar.txt with the design          * imach.c (Module): <title> changed, corresponds to .htm file
         of the covariance matrix to be input.          name. <head> headers where missing.
   
 2003-06-25  Brouard Nicolas  <brouard@homebrou>          * Makefile (Module): 0.98g
   
         * imach.c (Repository): Duplicated warning errors corrected.          * imach.c (Module): Weights can have a decimal point as for
         (Repository): Elapsed time after each iteration is now output. It          English (a comma might work with a correct LC_NUMERIC environment,
         helps to forecast when convergence will be reached. Elapsed time          otherwise the weight is truncated).
         is stamped in powell.  We created a new html file for the graphs          Modification of warning when the covariates values are not 0 or
         concerning matrix of covariance. It has extension -cov.htm.          1. 
           Version 0.98g
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  
   2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  
           * imach.c (Module): Comments concerning covariates added
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  
           * noreg-setup.iss (Module): Version 0.98f
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): refinements in the computation of lli if
           status=-2 in order to have more reliable computation if stepm is
         * imach.c (Repository): Check when date of death was earlier that          not 1 month. Version 0.98f
         current date of interview. It may happen when the death was just  
         prior to the death. In this case, dh was negative and likelihood  2006-03-15  Brouard Nicolas  <brouard@localhost>
         was wrong (infinity). We still send an "Error" but patch by  
         assuming that the date of death was just one stepm after the          * imach.c (Module): Bug if status = -2, the loglikelihood was
         interview.          computed as likelihood omitting the logarithm. Version O.98e
         (Repository): Because some people have very long ID (first column)  
         we changed int to long in num[] and we added a new lvector for  2006-03-14  Brouard Nicolas  <brouard@localhost>
         memory allocation. But we also truncated to 8 characters (left  
         truncation)          * imach.c (Module): varevsij Comments added explaining the second
           table of variances if popbased=1 .
         (Repository): No more line truncation errors.          (Module): Covariances of eij, ekl added, graphs fixed, new html link.
           (Module): Function pstamp added
 2003-06-14  Brouard Nicolas  <brouard@homebrou>          (Module): Version 0.98d 
   
         * imach.c (Repository): Add of a routine likelione (likelihood  2006-03-06  Brouard Nicolas  <brouard@localhost>
         only once) which prints on a text file  
         (ilk) the contributions to the likelihood for each          * imach.c (Module): Variance-covariance wrong links and
         individual/wave.          varian-covariance of ej. is needed (Saito).
   
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  2006-02-27  Brouard Nicolas  <brouard@localhost>
         * imach.c (Repository): Replace "freqsummary" at a correct  
         place. It differs from routine "prevalence" which may be called          * imach.c (Module): One freematrix added in mlikeli!
         many times. Probs is memory consuming and must be used with  
         parcimony.  2006-02-26  Brouard Nicolas  <brouard@localhost>
   
 2003-06-17    <brouard@BROUARD>          * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.  2006-02-24  Brouard Nicolas  <brouard@localhost>
   
 2003-05-16  Brouard Nicolas  <brouard@brouard>          * imach.c (Module): Memory leaks checks with valgrind and:
         * imach.c (Module): Insert of a warning if the delay between two          datafile was not closed, some imatrix were not freed and on matrix
         waves is negative.          allocation too.
   
         * imach.c (Module):  2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
 2003-05-03    <brouard@BROUARD>          * strsep.c (Module): Inclusion because not in mingw32!!!
   
         * imach.c: Some cleaning          * setup.iss.in (Module): IMACHSETUPVERSION added
   
 2003-03-28    <brouard@BROUARD>          * noreg-setup.iss (Module): added to cvs tree
         * imach.c (Module): In version up to 0.92 likelihood was computed  
         as if date of death was unknown. Death was treated as any other          * Makefile (Module): IMACHSETUPVERSION added
         health state: the date of the interview describes the actual state  
         and not the date of a change in health state. The former idea was  2006-01-30  BROUARD Nicolas  <brouard@localhost>
         to consider that at each interview the state was recorded  
         (healthy, disable or death) and IMaCh was corrected; but when we          * Makefile (Module, Module): Latest Makefile
         introduced the exact date of death then we should have modified  
         the contribution of an exact death to the likelihood. This new          * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
         contribution is smaller and very dependent of the step unit  
         stepm. It is no more the probability to die between last interview  2006-01-27  BROUARD Nicolas  <brouard@localhost>
         and month of death but the probability to survive from last  
         interview up to one month before death multiplied by the          * noreg-setup.iss (Module): ADDED
         probability to die within a month. Thanks to Chris  
         Jackson for correcting this bug.  Former versions increased  2006-01-24  BROUARD Nicolas  <brouard@localhost>
         mortality artificially. The bad side is that we add another loop  
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
         which slows down the processing. The difference can be up to 10%  2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
         lower mortality.  
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
 2002-05-30    <brouard@BROUARD>          (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
         *  
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
         * imach.c (Module): Add correlation matrix of one-step          is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
         probabilities and covariance matrix          mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
           * 
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   
   
   
   
   
Removed from v.1.38  
changed lines
  Added in v.1.54

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