Diff for /imach/src/ChangeLog between versions 1.45 and 1.65

version 1.45, 2021/03/31 14:11:04 version 1.65, 2023/05/08 17:46:42
Line 1 Line 1
 2021-03-31  Nicolas Brouard   <brouard@ined.fr>  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
   
         * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett          * imach.c (Module): Inverting the model equation and fixingg bugs
           in the drawings
 2021-03-08  Nicolas Brouard   <brouard@ined.fr>          "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
   
         * ./ (Module): Fixed bug on result:  2023-04-24  Nicolas Brouard  <brouard@ined.fr>
   
 2021-02-20  Nicolas Brouard   <brouard@ined.fr>          * imach.c (Module): some bugs in printinggnuplot 
   
         * imach.c (Module): Fix bug on quitting after result lines!  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
         (Module): Version 0.99r21  
           * imach.c (Module): Version 0.99r42 needed a newer version of
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>          Gnuplot. But newer version 0.99r43 should run with the Gnuplot
           version 5.0 or 5.1 distributed with IMaCh.
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error  
   2022-09-18  Nicolas Brouard   <brouard@ined.fr>
   
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>          * imach.c (Module): Fixing when a state in the data is 0 or higher
           than lstate+ndeath. Fixing the plot of contribution to Likelihood.
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.  
   2022-09-16  Nicolas Brouard   <brouard@ined.fr>
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy  
         and life table from the data without any state)  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
   
         * version.h: Summary: version 0.99.r19  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Projection syntax simplified          * imach.c (Module): Version 0.99r39 with colored dummy covariates
         We can now start projections, forward or backward, from the mean date          (fixed or time varying), using new last columns of
         of inteviews up to or down to a number of years of projection:          ILK_parameter.txt file.
         prevforecast=1 yearsfproj=15.3 mobil_average=0  
         or  2022-09-11  Nicolas Brouard   <brouard@ined.fr>
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0  
         or          * imach.c (Module): Adding timevarying products of any kinds,
         prevbackcast=1 yearsbproj=12.3 mobil_average=1          should work before shifting cotvar from ncovcol+nqv columns in
         or          order to have a correspondance between the column of cotvar and
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1          the id of column.
           (Module): Some cleaning and adding covariates in ILK.txt
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-09  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: doxygen tex bug  
           * imach.c (Module): Many improvements for fixing products of fixed
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>          timevarying as well as fixed * fixed, and test with quantitative
           covariate.
         * imach.c: Summary: There was some wrong lines added  
   2022-09-04  Nicolas Brouard   <brouard@ined.fr>
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Now the easy runs i.e. without result or
         * Makefile, imach.c: *** empty log message ***          model=1+age only did not work. The defautl combination should be 1
           and not 0 because everything hasn't been tranformed yet.
         * ChangeLog: Summary: C=  
   2022-09-02  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some updates  
           * imach.c: Version 0.99r35 because it outputs same results with
         * imach.c: Summary: Before ncovmax          1+age+V1+V1*age for females and 1+age for females only
           (education=1 noweight)
         * version.h: *** empty log message ***  
   2022-08-31  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: 0.99r18 unlimited number of individuals  
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.          * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
   
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Bug for young ages (<-30) will be in r17          * imach.c (Module): Version 0.99r33 A lot of changes in
           reassigning covariates: my first idea was that people will always
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>          use the first covariate V1 into the model but in fact they are
           producing data with many covariates and can use an equation model
         * Makefile: Summary: 0.99r16          with some of the covariate; it means that in a model V2+V3 instead
           of codtabm(k,Tvaraff[j]) which calculates for combination k, for
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
           the equation model is restricted to two variables only (V2, V3)
         * imach.c: Summary: Some bugs fixed          and the combination for V2 should be codtabm(k,1) instead of
           (codtabm(k,2), and the code should be
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
           made. All of these should be simplified once a day like we did in
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17          hpxij() for example by using precov[nres] which is computed in
           decoderesult for each nres of each resultline. Loop should be done
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          on the equation model globally by distinguishing only product with
           age (which are changing with age) and no more on type of
         * imach.c: Summary: Some bugs fixed          covariates, single dummies, single covariates. 
   
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>  2022-08-06  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:          *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
         Summary: Bug fixed by providing frequencies only for non missing covariates  
   2022-08-03  Nicolas Brouard   <brouard@ined.fr>
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>  
           *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
         * imach.c: Summary: some minor bugs  
   2022-07-25  Brouard Nicolas  <brouard@brouard.name>
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Error cptcovn instead of nsd in bmij (was
         * README.txt: *** empty log message ***          coredumped, revealed by Feiuno, thank you.
   
         * imach.c: Summary: Some bugs fixed, valgrind tested  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
   
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>          * r29 W and not sqrt(Wald)
   
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  2022-07-22  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
         Summary: Computing mean and stdeviation of fixed quantitative variables  
   2022-06-02  Brouard Nicolas  <brouard@brouard.name>
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Adding the Wald tests from the log to the main
         * imach.c: Summary: Some minor bugs fixed          htm for better display of the maximum likelihood estimators.
   
         * version.h: *** empty log message ***  2022-05-30  Brouard Nicolas  <brouard@brouard.name>
   
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c: With products of covariates (age or dummies or
           quantitatives), estimates of parameters were good but when
         * imach.c: *** empty log message ***          estimating variances the positions of newly created covariates
           were wrongly assigned and results were wrong. Thank to Feinua_Sun!
         * imach.c: Summary: Adding second argument for quitting  
   2022-05-24  Nicolas Brouard   <brouard@ined.fr>
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Some attempts to find a bug of wrong estimates
         * Makefile, README.txt, imach.c: Summary: 0.99r15          of confidencce intervals with product in the equation modelC
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c  
   2022-05-15  Nicolas Brouard   <brouard@ined.fr>
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module):  Some minor improvements
         * imach.c: Summary: temporary working  
   2022-04-13  Brouard Nicolas  <brouard@brouard.name>
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Adding link to text data files
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)  
   2022-04-11  Nicolas Brouard   <brouard@ined.fr>
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
         * imach.c: Summary: BOM files can be read now  
   2022-04-05  Brouard Nicolas  <brouard@ined.fr>
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Fixed covariates (dummy or quantitative)
         * imach.c: Summary: Graphs improvements          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
         * imach.c: Summary: Saito's color          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>  
   2022-03-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Version 0.99r14  
           * 99r25 Improvements in fixing discrepancies between covariates
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>          missing in result line but in model. 
   
         * imach.c: Summary: More documentation on projections  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some bug with rint  
           * ./ (Module): Fixed bug on result:
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>  
   *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c (Module): Fix bug on quitting after result lines!
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>          (Module): Version 0.99r21
   
         * imach.c: Summary: Code into subroutine, cleanings  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
   
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
   
         * imach.c:  
         Summary: backprojection and confidence intervals of backprevalence  2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
   
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>          *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
   
         * imach.c: Summary: temporary save for backprojection  2020-02-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)          *  (Module): imach.c Update mle=-3 (for computing Life expectancy
           and life table from the data without any state)
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>  
   2019-05-20  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: imach 0.99r13 Some bugs fixed  
           * version.h: Summary: version 0.99.r19
         * imach.c: Summary: Labels in graphs  
           * imach.c: Summary: Projection syntax simplified
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>          We can now start projections, forward or backward, from the mean date
           of inteviews up to or down to a number of years of projection:
         * imach.c: Summary: to save          prevforecast=1 yearsfproj=15.3 mobil_average=0
           or
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
           or
         * imach.c: *** empty log message ***          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: doxygen tex bug
   
         * imach.c: Summary: Gnuplot indexations fixed (humm)  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: Summary: There was some wrong lines added
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  
   2019-05-09  Brouard Nicolas  <brouard@ined.fr>
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>  
           * Makefile, imach.c: *** empty log message ***
         * imach.c: Summary: Version 0.99r12  
         Some cleanings, conformed with updated documentation.          * ChangeLog: Summary: C=
   
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some updates
   
         * version.h: *** empty log message ***          * imach.c: Summary: Before ncovmax
   
         * version.h: Summary:0.99r11          * version.h: *** empty log message ***
   
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: 0.99r18 unlimited number of individuals
           The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
         * imach.c: Summary: Temp  
   2018-12-13  Brouard Nicolas  <brouard@ined.fr>
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Bug for young ages (<-30) will be in r17
         * imach.c: Summary: Temporary  
   2018-12-05  Brouard Nicolas  <brouard@ined.fr>
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>  
           * Makefile: Summary: 0.99r16
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixing data parameter line  
           * imach.c: Summary: Some bugs fixed
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.99 in progress  
           * imach.c:  Summary: Bug for young ages (<-30) will be in r17
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Some bugs fixed
         * imach.c: Summary: not working  
   2018-05-01  Brouard Nicolas  <brouard@ined.fr>
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: Summary: continue          Summary: Bug fixed by providing frequencies only for non missing covariates
   
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>  2018-04-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Starting values from frequencies          * imach.c: Summary: some minor bugs
   
         * imach.c: *** empty log message ***  2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>          * README.txt: *** empty log message ***
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Some bugs fixed, valgrind tested
   
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixing a lots          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
         * imach.c: Summary: gnuplot problem in Back projection to fix  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Better  
           * imach.c: Summary: Some minor bugs fixed
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: *** empty log message ***
         * imach.c:  
         Summary: Improvement in Powell output in order to copy and paste  2018-02-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Starting tests of 0.99          * imach.c: *** empty log message ***
   
         * imach.c: Summary: to valgrind          * imach.c: Summary: Adding second argument for quitting
   
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>  2018-02-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * Makefile, README.txt, imach.c: Summary: 0.99r15
           New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>  
   2017-07-20  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: temporary working
         * imach.c: Summary: not working  
   2017-07-19  Brouard Nicolas  <brouard@ined.fr>
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
         * imach.c: Summary: not working  
   2017-07-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Not working  
           * imach.c: Summary: BOM files can be read now
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>  
   2017-06-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Completing for func too  
           * imach.c: Summary: Graphs improvements
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Saito's color
         * imach.c: Summary: Fixing some arrays, still debugging  
   2017-06-29  Brouard Nicolas  <brouard@ined.fr>
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Version 0.99r14
         * imach.c:  
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  2017-06-27  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: More documentation on projections
   
         * imach.c: Summary: temp          * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
   
         * imach.c: Summary: saving but not running          * imach.c: Summary: Some bug with rint
   
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  2017-05-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixes          * imach.c: *** empty log message ***
   
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  2017-05-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7          * imach.c: Summary: Code into subroutine, cleanings
   
         * setup.iss, Makefile, version.h: *** empty log message ***  2017-05-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temporary          * imach.c:
           Summary: backprojection and confidence intervals of backprevalence
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  
   2017-05-13  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
           * imach.c: Summary: temporary save for backprojection
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
         * imach.c: Summary: minor bug  
   2017-04-26  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.99r2  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Labels in graphs
         * imach.c: *** empty log message ***  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: to save
         * imach.c: Summary: 0.99 Back projections  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c: Summary: Experimental backcast  
   2017-04-05  Brouard Nicolas  <brouard@ined.fr>
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
         * imach.c: Summary: 0.98r4 Warning and status=-2  
   2017-04-04  Brouard Nicolas  <brouard@ined.fr>
         Version 0.98r4 is now:  
          - displaying an error when status is -1, date of interview unknown and date of death known;          * imach.c: Summary: Gnuplot indexations fixed (humm)
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.          * imach.c:
           Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
         * Makefile: *** empty log message ***  
   2017-04-03  Brouard Nicolas  <brouard@ined.fr>
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Version 0.99r12
         * Makefile: *** empty log message ***          Some cleanings, conformed with updated documentation.
   
         * imach.c: Summary: 0.98r4 working  2017-03-30  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: Summary: linuxrpm added          * version.h: *** empty log message ***
   
         * Makefile: *** empty log message ***          * version.h: Summary:0.99r11
   
         * imach.c: Summary: temporary not working  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Temp
   
         * imach.c: Summary: 0.98r4  2017-03-27  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Temporary
   
         * Makefile: *** empty log message ***  2017-03-08  Brouard Nicolas  <brouard@ined.fr>
   
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
   
         * Makefile:          * imach.c: Summary: Fixing data parameter line
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  
   2016-12-15  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: minor typo  
           * imach.c: Summary: 0.99 in progress
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
   2016-09-15  Brouard Nicolas  <brouard@ined.fr>
         Author: Nicolas Brouard  
           * imach.c: *** empty log message ***
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: not working
         * imach.c: Summary: Start working on projected prevalences  
   2016-09-08  Brouard Nicolas  <brouard@ined.fr>
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: continue
         * imach.c: Summary: Adding ftolpl parameter  
         Author: N Brouard  2016-09-07  Brouard Nicolas  <brouard@ined.fr>
   
         We had difficulties to get smoothed confidence intervals. It was due          * imach.c: Summary: Starting values from frequencies
         to the period prevalence which wasn't computed accurately. The inner  
         parameter ftolpl is now an outer parameter of the .imach parameter          * imach.c: *** empty log message ***
         file after estepm. If ftolpl is small 1.e-4 and estepm too,  
         computation are long.  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
   
         * version.h: *** empty log message ***          * imach.c: *** empty log message ***
   
         * imach.c: Summary: temporary  2016-08-30  Brouard Nicolas  <brouard@ined.fr>
   
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Fixing a lots
   
         * Makefile: *** empty log message ***  2016-08-29  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in: Summary: some new subdirs          * imach.c: Summary: gnuplot problem in Back projection to fix
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Better
   
         * setup.iss.in:  2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  
           * imach.c:
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>          Summary: Improvement in Powell output in order to copy and paste
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Starting tests of 0.99
   
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: to valgrind
   
         * imach.c:  2016-08-25  Brouard Nicolas  <brouard@ined.fr>
         Summary: 0.98r3 some clarification for graphs on likelihood contributions  
           * imach.c: *** empty log message ***
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>  
   2016-08-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Some new graphs of contribution to likelihood  
           * imach.c: *** empty log message ***
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: not working
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: looking at better estimation of the hessian          * imach.c: Summary: not working
   
         Also a better criteria for convergence to the period prevalence And          * imach.c: Summary: Not working
         therefore adding the number of years needed to converge. (The  
         prevalence in any alive state shold sum to one  2016-07-23  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Completing for func too
   
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>  2016-07-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: Summary: Fixing some arrays, still debugging
         Summary: Adding some overall graph on contribution to likelihood. Might change  
   2016-07-21  Brouard Nicolas  <brouard@ined.fr>
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * Makefile: *** empty log message ***          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
   
         * imach.c: Summary: 0.98r0  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
   
         - Some new graphs like suvival functions          * imach.c: Summary: temp
         - Some bugs fixed like model=1+age+V2.  
           * imach.c: Summary: saving but not running
         * ChangeLog, Makefile: Summary: 0.98r0  
   2016-07-01  Brouard Nicolas  <brouard@ined.fr>
         * CMakeLists.txt: Summary: Some tests for setup.iss  
           * imach.c: Summary: Fixes
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
   2016-02-19  Brouard Nicolas  <brouard@ined.fr>
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  
           * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  
           * setup.iss, Makefile, version.h: *** empty log message ***
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.  
           * imach.c: Summary: temporary
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
   2016-02-17  Brouard Nicolas  <brouard@ined.fr>
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  
           * imach.c: Summary: Probably last 0.98 stable version 0.98r6
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>  
   2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Merging 1.61 to 1.162  
           * imach.c: Summary: minor bug
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  
           * imach.c: Summary: 0.99r2
         * prevlim.h (Module):  
   2016-02-15  Brouard Nicolas  <brouard@ined.fr>
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>  
           * imach.c: *** empty log message ***
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...  
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  2016-02-12  Brouard Nicolas  <brouard@ined.fr>
   
 2010-04-29  brouard  <brouard@ined.fr>          * imach.c: Summary: 0.99 Back projections
   
         * imach.c (Module): Checking covariates for more complex models  2015-12-23  Brouard Nicolas  <brouard@ined.fr>
         than V1+V2. A lot of change to be done. Unstable.  
           * imach.c: Summary: Experimental backcast
 2010-04-26  brouard  <brouard@ined.fr>  
   2015-12-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): merging some libgsl code. Fixing computation  
         of likelione (using inter/intrapolation if mle = 0) in order to          * imach.c: Summary: 0.98r4 Warning and status=-2
         get same likelihood as if mle=1.  
         Some cleaning of code and comments added.          Version 0.98r4 is now:
            - displaying an error when status is -1, date of interview unknown and date of death known;
 2009-10-29  brouard  <brouard@ined.fr>           - permitting a status -2 when the vital status is unknown at a known date of right truncation.
           Older changes concerning s=-2, dating from 2005 have been supersed.
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  
           * Makefile: *** empty log message ***
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
   2015-12-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Clarifications on computing e.j  
           * Makefile: *** empty log message ***
 2006-04-28  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.98r4 working
         * imach.c (Module): Yes the sum of survivors was wrong since  
         imach-114 because nhstepm was no more computed in the age          * Makefile: Summary: linuxrpm added
         loop. Now we define nhstepma in the age loop.  
         (Module): In order to speed up (in case of numerous covariates) we          * Makefile: *** empty log message ***
         compute health expectancies (without variances) in a first step  
         and then all the health expectancies with variances or standard          * imach.c: Summary: temporary not working
         deviation (needs data from the Hessian matrices) which slows the  
         computation.  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
         In the future we should be able to stop the program is only health  
         expectancies and graph are needed without standard deviations.          * imach.c: Summary: 0.98r4
   
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.iss (Module):          * Makefile: *** empty log message ***
   
         * imach.c (Module): bugs in evsi + population file added in htm output file  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * Makefile:
           Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         * imach.c (Module):  
           * imach.c: Summary: minor typo
 2006-03-20  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
         * imach.c (Module): <title> changed, corresponds to .htm file  
         name. <head> headers where missing.          Author: Nicolas Brouard
   
         * Makefile (Module): 0.98g  2015-11-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Weights can have a decimal point as for          * imach.c: Summary: Start working on projected prevalences
         English (a comma might work with a correct LC_NUMERIC environment,  
         otherwise the weight is truncated).  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         Modification of warning when the covariates values are not 0 or  
         1.          * imach.c: Summary: Adding ftolpl parameter
         Version 0.98g          Author: N Brouard
   
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          We had difficulties to get smoothed confidence intervals. It was due
           to the period prevalence which wasn't computed accurately. The inner
         * imach.c (Module): Comments concerning covariates added          parameter ftolpl is now an outer parameter of the .imach parameter
           file after estepm. If ftolpl is small 1.e-4 and estepm too,
         * noreg-setup.iss (Module): Version 0.98f          computation are long.
   
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup          * version.h: *** empty log message ***
   
         * imach.c (Module): refinements in the computation of lli if          * imach.c: Summary: temporary
         status=-2 in order to have more reliable computation if stepm is  
         not 1 month. Version 0.98f  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-15  Brouard Nicolas  <brouard@localhost>          * Makefile: *** empty log message ***
   
         * imach.c (Module): Bug if status = -2, the loglikelihood was          * setup.iss.in: Summary: some new subdirs
         computed as likelihood omitting the logarithm. Version O.98e  
           * imach.c: *** empty log message ***
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
           * setup.iss.in:
         * imach.c (Module): varevsij Comments added explaining the second          Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         table of variances if popbased=1 .  
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
         (Module): Function pstamp added  
         (Module): Version 0.98d          * imach.c: *** empty log message ***
   
 2006-03-06  Brouard Nicolas  <brouard@localhost>  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Variance-covariance wrong links and          * imach.c:
         varian-covariance of ej. is needed (Saito).          Summary: 0.98r3 some clarification for graphs on likelihood contributions
   
 2006-02-27  Brouard Nicolas  <brouard@localhost>  2015-10-01  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): One freematrix added in mlikeli!          * imach.c: Summary: Some new graphs of contribution to likelihood
   
 2006-02-26  Brouard Nicolas  <brouard@localhost>  2015-09-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Some improvements in processing parameter          * Makefile:
         filename with strsep.          Summary: Version read from version.h, itself read with cmake
   
 2006-02-24  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: looking at better estimation of the hessian
   
         * imach.c (Module): Memory leaks checks with valgrind and:          Also a better criteria for convergence to the period prevalence And
         datafile was not closed, some imatrix were not freed and on matrix          therefore adding the number of years needed to converge. (The
         allocation too.          prevalence in any alive state shold sum to one
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * Makefile: *** empty log message ***
   
         * strsep.c (Module): Inclusion because not in mingw32!!!  2015-09-22  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in (Module): IMACHSETUPVERSION added          * imach.c:
           Summary: Adding some overall graph on contribution to likelihood. Might change
         * noreg-setup.iss (Module): added to cvs tree  
   2015-09-15  Brouard Nicolas  <brouard@ined.fr>
         * Makefile (Module): IMACHSETUPVERSION added  
           * Makefile: *** empty log message ***
 2006-01-30  BROUARD Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.98r0
         * Makefile (Module, Module): Latest Makefile  
           - Some new graphs like survival functions
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe          - Some bugs fixed like model=1+age+V2.
   
 2006-01-27  BROUARD Nicolas  <brouard@localhost>          * ChangeLog, Makefile: Summary: 0.98r0
   
         * noreg-setup.iss (Module): ADDED          * CMakeLists.txt: Summary: Some tests for setup.iss
   
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
   
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
 2005-09-30    <lievre@PC_00595>          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
   
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
         (Module): If the status is missing at the last wave but we know  
         that the person is alive, then we can code his/her status as -2          * imach.c (Module): Merging 1.61 to 1.162
         (instead of missing=-1 in earlier versions) and his/her  
         contributions to the likelihood is 1 - Prob of dying from last  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  
         the healthy state at last known wave). Version is 0.98          * prevlim.h (Module): 
   
 2004-05-20  Brouard Nicolas  <brouard@localhost>  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
   
         * imach.c (Repository):          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
         Agnes added a direct estimation of mortality (without the need of          (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
         computing period prevalence and differential mortality). Thus here  
         is version 0.97a which has been distributed to some people at  2010-04-29  brouard  <brouard@ined.fr>
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  
         mortality using covariates is not done today. Estimating direct          * imach.c (Module): Checking covariates for more complex models
         mortality is a very different process because it doesn't need          than V1+V2. A lot of change to be done. Unstable.
         interpolation because it is easy to get the lx from the force of  
         the mortality mux in the simplest case as for a Gompertz (log mux  2010-04-26  brouard  <brouard@ined.fr>
         = a + b*x . But we have been able to incorporate the new code  
         within former imach program (0.96d) without deteriorating too much          * imach.c (Module): merging some libgsl code. Fixing computation
         the understanding of the program.          of likelione (using inter/intrapolation if mle = 0) in order to
           get same likelihood as if mle=1.
 2003-06-25    <brouard@BROUARD>          Some cleaning of code and comments added.
   
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  2009-10-29  brouard  <brouard@ined.fr>
         exist so I changed back to asctime which exists.  
         (Module): Version 0.96b          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
   
 2003-06-24    <brouard@BROUARD>  2006-06-30  Brouard Nicolas  <brouard@localhost>
   
         * imach.c (Module): Some bugs corrected for windows. Also, when          * imach.c (Module): Clarifications on computing e.j
         mle=-1 a template is output in file "or"mypar.txt with the design  
         of the covariance matrix to be input.  2006-04-28  Brouard Nicolas  <brouard@localhost>
   
 2003-06-25  Brouard Nicolas  <brouard@homebrou>          * imach.c (Module): Yes the sum of survivors was wrong since
           imach-114 because nhstepm was no more computed in the age
         * imach.c (Repository): Duplicated warning errors corrected.          loop. Now we define nhstepma in the age loop.
         (Repository): Elapsed time after each iteration is now output. It          (Module): In order to speed up (in case of numerous covariates) we
         helps to forecast when convergence will be reached. Elapsed time          compute health expectancies (without variances) in a first step
         is stamped in powell.  We created a new html file for the graphs          and then all the health expectancies with variances or standard
         concerning matrix of covariance. It has extension -cov.htm.          deviation (needs data from the Hessian matrices) which slows the
           computation.
 2003-06-23  Brouard Nicolas  <brouard@homebrou>          In the future we should be able to stop the program is only health
           expectancies and graph are needed without standard deviations.
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  
   2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  
           * imach.iss (Module): 
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  
           * imach.c (Module): bugs in evsi + population file added in htm output file
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  
   2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
         * imach.c (Repository): Check when date of death was earlier that          * imach.c (Module): 
         current date of interview. It may happen when the death was just  
         prior to the death. In this case, dh was negative and likelihood  2006-03-20  Brouard Nicolas  <brouard@localhost>
         was wrong (infinity). We still send an "Error" but patch by  
         assuming that the date of death was just one stepm after the          * imach.c (Module): <title> changed, corresponds to .htm file
         interview.          name. <head> headers where missing.
         (Repository): Because some people have very long ID (first column)  
         we changed int to long in num[] and we added a new lvector for          * Makefile (Module): 0.98g
         memory allocation. But we also truncated to 8 characters (left  
         truncation)          * imach.c (Module): Weights can have a decimal point as for
           English (a comma might work with a correct LC_NUMERIC environment,
         (Repository): No more line truncation errors.          otherwise the weight is truncated).
           Modification of warning when the covariates values are not 0 or
 2003-06-14  Brouard Nicolas  <brouard@homebrou>          1. 
           Version 0.98g
         * imach.c (Repository): Add of a routine likelione (likelihood  
         only once) which prints on a text file  2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         (ilk) the contributions to the likelihood for each  
         individual/wave.          * imach.c (Module): Comments concerning covariates added
   
 2003-06-13  Brouard Nicolas  <brouard@homebrou>          * noreg-setup.iss (Module): Version 0.98f
         * imach.c (Repository): Replace "freqsummary" at a correct  
         place. It differs from routine "prevalence" which may be called          * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
         many times. Probs is memory consuming and must be used with  
         parcimony.          * imach.c (Module): refinements in the computation of lli if
           status=-2 in order to have more reliable computation if stepm is
 2003-06-17    <brouard@BROUARD>          not 1 month. Version 0.98f
   
         * timeval.h (Module): Added included file to make use of  2006-03-15  Brouard Nicolas  <brouard@localhost>
         gettimeofday working on win32 with cygwin.  
           * imach.c (Module): Bug if status = -2, the loglikelihood was
 2003-05-16  Brouard Nicolas  <brouard@brouard>          computed as likelihood omitting the logarithm. Version O.98e
         * imach.c (Module): Insert of a warning if the delay between two  
         waves is negative.  2006-03-14  Brouard Nicolas  <brouard@localhost>
   
         * imach.c (Module):          * imach.c (Module): varevsij Comments added explaining the second
           table of variances if popbased=1 .
 2003-05-03    <brouard@BROUARD>          (Module): Covariances of eij, ekl added, graphs fixed, new html link.
           (Module): Function pstamp added
         * imach.c: Some cleaning          (Module): Version 0.98d 
   
 2003-03-28    <brouard@BROUARD>  2006-03-06  Brouard Nicolas  <brouard@localhost>
         * imach.c (Module): In version up to 0.92 likelihood was computed  
         as if date of death was unknown. Death was treated as any other          * imach.c (Module): Variance-covariance wrong links and
         health state: the date of the interview describes the actual state          varian-covariance of ej. is needed (Saito).
         and not the date of a change in health state. The former idea was  
         to consider that at each interview the state was recorded  2006-02-27  Brouard Nicolas  <brouard@localhost>
         (healthy, disable or death) and IMaCh was corrected; but when we  
         introduced the exact date of death then we should have modified          * imach.c (Module): One freematrix added in mlikeli!
         the contribution of an exact death to the likelihood. This new  
         contribution is smaller and very dependent of the step unit  2006-02-26  Brouard Nicolas  <brouard@localhost>
         stepm. It is no more the probability to die between last interview  
         and month of death but the probability to survive from last          * imach.c (Module): Some improvements in processing parameter
         interview up to one month before death multiplied by the          filename with strsep.
         probability to die within a month. Thanks to Chris  
         Jackson for correcting this bug.  Former versions increased  2006-02-24  Brouard Nicolas  <brouard@localhost>
         mortality artificially. The bad side is that we add another loop  
           * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
         which slows down the processing. The difference can be up to 10%          allocation too.
   
   2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         lower mortality.  
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
   
           * noreg-setup.iss (Module): added to cvs tree
 2002-05-30    <brouard@BROUARD>  
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
         *  
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
         * imach.c (Module): Add correlation matrix of one-step  
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
         probabilities and covariance matrix          * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

Removed from v.1.45  
changed lines
  Added in v.1.65


FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>