Diff for /imach/src/ChangeLog between versions 1.53 and 1.65

version 1.53, 2022/07/22 12:03:53 version 1.65, 2023/05/08 17:46:42
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 2022-07-22  Nicolas Brouard   <brouard@ined.fr>  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
   
         *  imach.c (Module): Output of Wald test in the htm file and not only in the log.          * imach.c (Module): Inverting the model equation and fixingg bugs
           in the drawings
 2022-05-30  Brouard Nicolas  <brouard@brouard.name>          "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
   
         * imach.c: With products of covariates (age or dummies or  2023-04-24  Nicolas Brouard  <brouard@ined.fr>
         quantitatives), estimates of parameters were good but when  
         estimating variances the positions of newly created covariates          * imach.c (Module): some bugs in printinggnuplot 
         were wrongly assigned and results were wrong. Thank to Feinua_Sun!  
   2022-09-19  Nicolas Brouard   <brouard@ined.fr>
 2022-05-24  Nicolas Brouard   <brouard@ined.fr>  
           * imach.c (Module): Version 0.99r42 needed a newer version of
         * imach.c (Module): Some attempts to find a bug of wrong estimates          Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         of confidencce intervals with product in the equation modelC          version 5.0 or 5.1 distributed with IMaCh.
   
 2022-05-15  Nicolas Brouard   <brouard@ined.fr>  2022-09-18  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module):  Some minor improvements          * imach.c (Module): Fixing when a state in the data is 0 or higher
           than lstate+ndeath. Fixing the plot of contribution to Likelihood.
 2022-04-13  Brouard Nicolas  <brouard@brouard.name>  
   2022-09-16  Nicolas Brouard   <brouard@ined.fr>
         * imach.c (Module): Adding link to text data files  
           * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
 2022-04-11  Nicolas Brouard   <brouard@ined.fr>  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
         * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed  
           * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
 2022-04-05  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
         * imach.c (Module): Fixed covariates (dummy or quantitative)  
         with missing values have never been allowed but are ERRORS and          * imach.c (Module): Version 0.99r39 with colored dummy covariates
         program quits. Standard deviations of fixed covariates were          (fixed or time varying), using new last columns of
         wrongly computed. Mean and standard deviations of time varying          ILK_parameter.txt file.
         covariates are still not computed.  
   2022-09-11  Nicolas Brouard   <brouard@ined.fr>
 2022-03-17  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Adding timevarying products of any kinds,
         * 99r25 Improvements in fixing discrepancies between covariates          should work before shifting cotvar from ncovcol+nqv columns in
         missing in result line but in model.          order to have a correspondance between the column of cotvar and
           the id of column.
 *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>          (Module): Some cleaning and adding covariates in ILK.txt
         * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett  
   2022-09-09  Nicolas Brouard   <brouard@ined.fr>
 *2021-03-08  Nicolas Brouard   <brouard@ined.fr>  
           * imach.c (Module): Many improvements for fixing products of fixed
         * ./ (Module): Fixed bug on result:          timevarying as well as fixed * fixed, and test with quantitative
           covariate.
 *2021-02-20  Nicolas Brouard   <brouard@ined.fr>  
   2022-09-04  Nicolas Brouard   <brouard@ined.fr>
         * imach.c (Module): Fix bug on quitting after result lines!  
         (Module): Version 0.99r21          * imach.c (Module): Now the easy runs i.e. without result or
           model=1+age only did not work. The defautl combination should be 1
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>          and not 0 because everything hasn't been tranformed yet.
   
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error  2022-09-02  Nicolas Brouard   <brouard@ined.fr>
   
           * imach.c: Version 0.99r35 because it outputs same results with
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>          1+age+V1+V1*age for females and 1+age for females only
           (education=1 noweight)
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.  
   2022-08-31  Nicolas Brouard   <brouard@ined.fr>
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy  
         and life table from the data without any state)  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
   
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Version 0.99r33 A lot of changes in
           reassigning covariates: my first idea was that people will always
         * version.h: Summary: version 0.99.r19          use the first covariate V1 into the model but in fact they are
           producing data with many covariates and can use an equation model
         * imach.c: Summary: Projection syntax simplified          with some of the covariate; it means that in a model V2+V3 instead
         We can now start projections, forward or backward, from the mean date          of codtabm(k,Tvaraff[j]) which calculates for combination k, for
         of inteviews up to or down to a number of years of projection:          three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         prevforecast=1 yearsfproj=15.3 mobil_average=0          the equation model is restricted to two variables only (V2, V3)
         or          and the combination for V2 should be codtabm(k,1) instead of
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0          (codtabm(k,2), and the code should be
         or          codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
         prevbackcast=1 yearsbproj=12.3 mobil_average=1          made. All of these should be simplified once a day like we did in
         or          hpxij() for example by using precov[nres] which is computed in
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1          decoderesult for each nres of each resultline. Loop should be done
           on the equation model globally by distinguishing only product with
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>          age (which are changing with age) and no more on type of
           covariates, single dummies, single covariates. 
         * imach.c: Summary: doxygen tex bug  
   2022-08-06  Nicolas Brouard   <brouard@ined.fr>
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>  
           *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
         * imach.c: Summary: There was some wrong lines added  
   2022-08-03  Nicolas Brouard   <brouard@ined.fr>
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>  
           *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
         * Makefile, imach.c: *** empty log message ***  
   2022-07-25  Brouard Nicolas  <brouard@brouard.name>
         * ChangeLog: Summary: C=  
           * imach.c (Module): Error cptcovn instead of nsd in bmij (was
         * imach.c: Summary: Some updates          coredumped, revealed by Feiuno, thank you.
   
         * imach.c: Summary: Before ncovmax  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
   
         * version.h: *** empty log message ***          * r29 W and not sqrt(Wald)
   
         * imach.c: Summary: 0.99r18 unlimited number of individuals  2022-07-22  Nicolas Brouard   <brouard@ined.fr>
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.  
           *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>  
   2022-06-02  Brouard Nicolas  <brouard@brouard.name>
         * imach.c: Summary: Bug for young ages (<-30) will be in r17  
           * imach.c (Module): Adding the Wald tests from the log to the main
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>          htm for better display of the maximum likelihood estimators.
   
         * Makefile: Summary: 0.99r16  2022-05-30  Brouard Nicolas  <brouard@brouard.name>
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          * imach.c: With products of covariates (age or dummies or
           quantitatives), estimates of parameters were good but when
         * imach.c: Summary: Some bugs fixed          estimating variances the positions of newly created covariates
           were wrongly assigned and results were wrong. Thank to Feinua_Sun!
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  
   2022-05-24  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17  
           * imach.c (Module): Some attempts to find a bug of wrong estimates
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          of confidencce intervals with product in the equation modelC
   
         * imach.c: Summary: Some bugs fixed  2022-05-15  Nicolas Brouard   <brouard@ined.fr>
   
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module):  Some minor improvements
   
         * imach.c:  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
         Summary: Bug fixed by providing frequencies only for non missing covariates  
           * imach.c (Module): Adding link to text data files
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>  
   2022-04-11  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: some minor bugs  
           * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>  
   2022-04-05  Brouard Nicolas  <brouard@ined.fr>
         * README.txt: *** empty log message ***  
           * imach.c (Module): Fixed covariates (dummy or quantitative)
         * imach.c: Summary: Some bugs fixed, valgrind tested          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  
   2022-03-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: Computing mean and stdeviation of fixed quantitative variables          * 99r25 Improvements in fixing discrepancies between covariates
           missing in result line but in model. 
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>  
   *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some minor bugs fixed          * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
   
         * version.h: *** empty log message ***  *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
   
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>          * ./ (Module): Fixed bug on result:
   
         * imach.c: *** empty log message ***  *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Adding second argument for quitting          * imach.c (Module): Fix bug on quitting after result lines!
           (Module): Version 0.99r21
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  
   2021-02-12  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, README.txt, imach.c: Summary: 0.99r15  
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
   
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>  
   2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
         * imach.c: Summary: temporary working  
           *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>  
   2020-02-22  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)  
           *  (Module): imach.c Update mle=-3 (for computing Life expectancy
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>          and life table from the data without any state)
   
         * imach.c: Summary: BOM files can be read now  2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>          * version.h: Summary: version 0.99.r19
   
         * imach.c: Summary: Graphs improvements          * imach.c: Summary: Projection syntax simplified
           We can now start projections, forward or backward, from the mean date
         * imach.c: Summary: Saito's color          of inteviews up to or down to a number of years of projection:
           prevforecast=1 yearsfproj=15.3 mobil_average=0
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>          or
           prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
         * imach.c: Summary: Version 0.99r14          or
           prevbackcast=1 yearsbproj=12.3 mobil_average=1
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>          or
           prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
         * imach.c: Summary: More documentation on projections  
   2019-05-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)  
           * imach.c: Summary: doxygen tex bug
         * imach.c: Summary: Some bug with rint  
   2019-05-16  Brouard Nicolas  <brouard@ined.fr>
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: There was some wrong lines added
         * imach.c: *** empty log message ***  
   2019-05-09  Brouard Nicolas  <brouard@ined.fr>
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>  
           * Makefile, imach.c: *** empty log message ***
         * imach.c: Summary: Code into subroutine, cleanings  
           * ChangeLog: Summary: C=
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some updates
         * imach.c:  
         Summary: backprojection and confidence intervals of backprevalence          * imach.c: Summary: Before ncovmax
   
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>          * version.h: *** empty log message ***
   
         * imach.c: Summary: temporary save for backprojection          * imach.c: Summary: 0.99r18 unlimited number of individuals
           The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)  
   2018-12-13  Brouard Nicolas  <brouard@ined.fr>
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Bug for young ages (<-30) will be in r17
         * imach.c: Summary: imach 0.99r13 Some bugs fixed  
   2018-12-05  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Labels in graphs  
           * Makefile: Summary: 0.99r16
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: to save  
           * imach.c: Summary: Some bugs fixed
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c:  Summary: Bug for young ages (<-30) will be in r17
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1  
           * imach.c: Summary: Some bugs fixed
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>  
   2018-05-01  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Gnuplot indexations fixed (humm)  
           * imach.c:
         * imach.c:          Summary: Bug fixed by providing frequencies only for non missing covariates
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  
   2018-04-27  Brouard Nicolas  <brouard@ined.fr>
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: some minor bugs
         * imach.c: Summary: Version 0.99r12  
         Some cleanings, conformed with updated documentation.  2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>          * README.txt: *** empty log message ***
   
         * version.h: *** empty log message ***          * imach.c: Summary: Some bugs fixed, valgrind tested
   
         * version.h: Summary:0.99r11  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
         * imach.c: Summary: Temp          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Temporary  
           * imach.c: Summary: Some minor bugs fixed
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: *** empty log message ***
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed  
   2018-02-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixing data parameter line  
           * imach.c: *** empty log message ***
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Adding second argument for quitting
         * imach.c: Summary: 0.99 in progress  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
         * imach.c: *** empty log message ***          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
         * imach.c: Summary: not working  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: temporary working
   
         * imach.c: Summary: continue  2017-07-19  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
   
         * imach.c: Summary: Starting values from frequencies  2017-07-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: Summary: BOM files can be read now
   
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>  2017-06-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Graphs improvements
   
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Saito's color
   
         * imach.c: Summary: Fixing a lots  2017-06-29  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Version 0.99r14
   
         * imach.c: Summary: gnuplot problem in Back projection to fix  2017-06-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Better          * imach.c: Summary: More documentation on projections
   
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
   
         * imach.c:          * imach.c: Summary: Some bug with rint
         Summary: Improvement in Powell output in order to copy and paste  
   2017-05-24  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Starting tests of 0.99  
           * imach.c: *** empty log message ***
         * imach.c: Summary: to valgrind  
   2017-05-23  Brouard Nicolas  <brouard@ined.fr>
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Code into subroutine, cleanings
         * imach.c: *** empty log message ***  
   2017-05-18  Brouard Nicolas  <brouard@ined.fr>
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: *** empty log message ***          Summary: backprojection and confidence intervals of backprevalence
   
         * imach.c: Summary: not working  2017-05-13  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: temporary save for backprojection
   
         * imach.c: Summary: not working          * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
   
         * imach.c: Summary: Not working  2017-04-26  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: imach 0.99r13 Some bugs fixed
   
         * imach.c: Summary: Completing for func too          * imach.c: Summary: Labels in graphs
   
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>  2017-04-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixing some arrays, still debugging          * imach.c: Summary: to save
   
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>  2017-04-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: *** empty log message ***
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  
   2017-04-05  Brouard Nicolas  <brouard@ined.fr>
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
         * imach.c: Summary: temp  
   2017-04-04  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: saving but not running  
           * imach.c: Summary: Gnuplot indexations fixed (humm)
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: Summary: Fixes          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
   
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
   
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7          * imach.c: Summary: Version 0.99r12
           Some cleanings, conformed with updated documentation.
         * setup.iss, Makefile, version.h: *** empty log message ***  
   2017-03-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary  
           * version.h: *** empty log message ***
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: Summary:0.99r11
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
   2017-03-29  Brouard Nicolas  <brouard@ined.fr>
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Temp
         * imach.c: Summary: minor bug  
   2017-03-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.99r2  
           * imach.c: Summary: Temporary
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>  
   2017-03-08  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Fixing data parameter line
         * imach.c: Summary: 0.99 Back projections  
   2016-12-15  Brouard Nicolas  <brouard@ined.fr>
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: 0.99 in progress
         * imach.c: Summary: Experimental backcast  
   2016-09-15  Brouard Nicolas  <brouard@ined.fr>
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c: Summary: 0.98r4 Warning and status=-2  
           * imach.c: Summary: not working
         Version 0.98r4 is now:  
          - displaying an error when status is -1, date of interview unknown and date of death known;  2016-09-08  Brouard Nicolas  <brouard@ined.fr>
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.          * imach.c: Summary: continue
   
         * Makefile: *** empty log message ***  2016-09-07  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Starting values from frequencies
   
         * Makefile: *** empty log message ***          * imach.c: *** empty log message ***
   
         * imach.c: Summary: 0.98r4 working  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: Summary: linuxrpm added          * imach.c: *** empty log message ***
   
         * Makefile: *** empty log message ***  2016-08-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temporary not working          * imach.c: Summary: Fixing a lots
   
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>  2016-08-29  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4          * imach.c: Summary: gnuplot problem in Back projection to fix
   
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Better
   
         * Makefile: *** empty log message ***  2016-08-26  Brouard Nicolas  <brouard@ined.fr>
   
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>          * imach.c:
           Summary: Improvement in Powell output in order to copy and paste
         * Makefile:  
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more          * imach.c: Summary: Starting tests of 0.99
   
         * imach.c: Summary: minor typo          * imach.c: Summary: to valgrind
   
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  2016-08-25  Brouard Nicolas  <brouard@ined.fr>
   
         Author: Nicolas Brouard          * imach.c: *** empty log message ***
   
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  2016-08-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Start working on projected prevalences          * imach.c: *** empty log message ***
   
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: not working
   
         * imach.c: Summary: Adding ftolpl parameter  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
         Author: N Brouard  
           * imach.c: Summary: not working
         We had difficulties to get smoothed confidence intervals. It was due  
         to the period prevalence which wasn't computed accurately. The inner          * imach.c: Summary: Not working
         parameter ftolpl is now an outer parameter of the .imach parameter  
         file after estepm. If ftolpl is small 1.e-4 and estepm too,  2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         computation are long.  
           * imach.c: Summary: Completing for func too
         * version.h: *** empty log message ***  
   2016-07-22  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary  
           * imach.c: Summary: Fixing some arrays, still debugging
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>  
   2016-07-21  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c:
         * setup.iss.in: Summary: some new subdirs          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
   
         * imach.c: *** empty log message ***  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in:          * imach.c: Summary: temp
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  
           * imach.c: Summary: saving but not running
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>  
   2016-07-01  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Fixes
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>  
   2016-02-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: 0.98r3 some clarification for graphs on likelihood contributions          * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
   
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>          * setup.iss, Makefile, version.h: *** empty log message ***
   
         * imach.c: Summary: Some new graphs of contribution to likelihood          * imach.c: Summary: temporary
   
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>  2016-02-17  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile:          * imach.c: Summary: Probably last 0.98 stable version 0.98r6
         Summary: Version read from version.h, itself read with cmake  
   2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: looking at better estimation of the hessian  
           * imach.c: Summary: minor bug
         Also a better criteria for convergence to the period prevalence And  
         therefore adding the number of years needed to converge. (The          * imach.c: Summary: 0.99r2
         prevalence in any alive state shold sum to one  
   2016-02-15  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: *** empty log message ***
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>  
   2016-02-12  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: Adding some overall graph on contribution to likelihood. Might change          * imach.c: Summary: 0.99 Back projections
   
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>  2015-12-23  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Experimental backcast
   
         * imach.c: Summary: 0.98r0  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
   
         - Some new graphs like survival functions          * imach.c: Summary: 0.98r4 Warning and status=-2
         - Some bugs fixed like model=1+age+V2.  
           Version 0.98r4 is now:
         * ChangeLog, Makefile: Summary: 0.98r0           - displaying an error when status is -1, date of interview unknown and date of death known;
            - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         * CMakeLists.txt: Summary: Some tests for setup.iss          Older changes concerning s=-2, dating from 2005 have been supersed.
   
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>          * Makefile: *** empty log message ***
   
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
   
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>          * Makefile: *** empty log message ***
   
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.          * imach.c: Summary: 0.98r4 working
   
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>          * Makefile: Summary: linuxrpm added
   
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)          * Makefile: *** empty log message ***
   
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>          * imach.c: Summary: temporary not working
   
         * imach.c (Module): Merging 1.61 to 1.162  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
   
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>          * imach.c: Summary: 0.98r4
   
         * prevlim.h (Module):  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
   
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>          * Makefile: *** empty log message ***
   
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
           * Makefile:
 2010-04-29  brouard  <brouard@ined.fr>          Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
   
         * imach.c (Module): Checking covariates for more complex models          * imach.c: Summary: minor typo
         than V1+V2. A lot of change to be done. Unstable.  
           * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
 2010-04-26  brouard  <brouard@ined.fr>  
           Author: Nicolas Brouard
         * imach.c (Module): merging some libgsl code. Fixing computation  
         of likelione (using inter/intrapolation if mle = 0) in order to  2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         get same likelihood as if mle=1.  
         Some cleaning of code and comments added.          * imach.c: Summary: Start working on projected prevalences
   
 2009-10-29  brouard  <brouard@ined.fr>  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.          * imach.c: Summary: Adding ftolpl parameter
           Author: N Brouard
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
           We had difficulties to get smoothed confidence intervals. It was due
         * imach.c (Module): Clarifications on computing e.j          to the period prevalence which wasn't computed accurately. The inner
           parameter ftolpl is now an outer parameter of the .imach parameter
 2006-04-28  Brouard Nicolas  <brouard@localhost>          file after estepm. If ftolpl is small 1.e-4 and estepm too,
           computation are long.
         * imach.c (Module): Yes the sum of survivors was wrong since  
         imach-114 because nhstepm was no more computed in the age          * version.h: *** empty log message ***
         loop. Now we define nhstepma in the age loop.  
         (Module): In order to speed up (in case of numerous covariates) we          * imach.c: Summary: temporary
         compute health expectancies (without variances) in a first step  
         and then all the health expectancies with variances or standard  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
         deviation (needs data from the Hessian matrices) which slows the  
         computation.          * Makefile: *** empty log message ***
         In the future we should be able to stop the program is only health  
         expectancies and graph are needed without standard deviations.          * setup.iss.in: Summary: some new subdirs
   
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: *** empty log message ***
   
         * imach.iss (Module):          * setup.iss.in:
           Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         * imach.c (Module): bugs in evsi + population file added in htm output file  
   2015-10-24  Brouard Nicolas  <brouard@ined.fr>
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c (Module):  
   2015-10-23  Brouard Nicolas  <brouard@ined.fr>
 2006-03-20  Brouard Nicolas  <brouard@localhost>  
           * imach.c:
         * imach.c (Module): <title> changed, corresponds to .htm file          Summary: 0.98r3 some clarification for graphs on likelihood contributions
         name. <head> headers where missing.  
   2015-10-01  Brouard Nicolas  <brouard@ined.fr>
         * Makefile (Module): 0.98g  
           * imach.c: Summary: Some new graphs of contribution to likelihood
         * imach.c (Module): Weights can have a decimal point as for  
         English (a comma might work with a correct LC_NUMERIC environment,  2015-09-30  Brouard Nicolas  <brouard@ined.fr>
         otherwise the weight is truncated).  
         Modification of warning when the covariates values are not 0 or          * Makefile:
         1.          Summary: Version read from version.h, itself read with cmake
         Version 0.98g  
           * imach.c: Summary: looking at better estimation of the hessian
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           Also a better criteria for convergence to the period prevalence And
         * imach.c (Module): Comments concerning covariates added          therefore adding the number of years needed to converge. (The
           prevalence in any alive state shold sum to one
         * noreg-setup.iss (Module): Version 0.98f  
           * Makefile: *** empty log message ***
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup  
   2015-09-22  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): refinements in the computation of lli if  
         status=-2 in order to have more reliable computation if stepm is          * imach.c:
         not 1 month. Version 0.98f          Summary: Adding some overall graph on contribution to likelihood. Might change
   
 2006-03-15  Brouard Nicolas  <brouard@localhost>  2015-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Bug if status = -2, the loglikelihood was          * Makefile: *** empty log message ***
         computed as likelihood omitting the logarithm. Version O.98e  
           * imach.c: Summary: 0.98r0
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
           - Some new graphs like survival functions
         * imach.c (Module): varevsij Comments added explaining the second          - Some bugs fixed like model=1+age+V2.
         table of variances if popbased=1 .  
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.          * ChangeLog, Makefile: Summary: 0.98r0
         (Module): Function pstamp added  
         (Module): Version 0.98d          * CMakeLists.txt: Summary: Some tests for setup.iss
   
 2006-03-06  Brouard Nicolas  <brouard@localhost>  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * imach.c (Module): Variance-covariance wrong links and          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
         varian-covariance of ej. is needed (Saito).  
   2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
 2006-02-27  Brouard Nicolas  <brouard@localhost>  
           *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
         * imach.c (Module): One freematrix added in mlikeli!  
   2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
 2006-02-26  Brouard Nicolas  <brouard@localhost>  
           *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
         * imach.c (Module): Some improvements in processing parameter  
         filename with strsep.  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
   
 2006-02-24  Brouard Nicolas  <brouard@localhost>          * imach.c (Module): Merging 1.61 to 1.162
   
         * imach.c (Module): Memory leaks checks with valgrind and:  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         datafile was not closed, some imatrix were not freed and on matrix  
         allocation too.          * prevlim.h (Module): 
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
   
         * strsep.c (Module): Inclusion because not in mingw32!!!          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
           (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
         * setup.iss.in (Module): IMACHSETUPVERSION added  
   2010-04-29  brouard  <brouard@ined.fr>
         * noreg-setup.iss (Module): added to cvs tree  
           * imach.c (Module): Checking covariates for more complex models
         * Makefile (Module): IMACHSETUPVERSION added          than V1+V2. A lot of change to be done. Unstable.
   
 2006-01-30  BROUARD Nicolas  <brouard@localhost>  2010-04-26  brouard  <brouard@ined.fr>
   
         * Makefile (Module, Module): Latest Makefile          * imach.c (Module): merging some libgsl code. Fixing computation
           of likelione (using inter/intrapolation if mle = 0) in order to
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe          get same likelihood as if mle=1.
           Some cleaning of code and comments added.
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  
   2009-10-29  brouard  <brouard@ined.fr>
         * noreg-setup.iss (Module): ADDED  
           * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  
   2006-06-30  Brouard Nicolas  <brouard@localhost>
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.  
           * imach.c (Module): Clarifications on computing e.j
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  
   2006-04-28  Brouard Nicolas  <brouard@localhost>
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg  
           * imach.c (Module): Yes the sum of survivors was wrong since
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X          imach-114 because nhstepm was no more computed in the age
           loop. Now we define nhstepma in the age loop.
 2005-09-30    <lievre@PC_00595>          (Module): In order to speed up (in case of numerous covariates) we
           compute health expectancies (without variances) in a first step
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.          and then all the health expectancies with variances or standard
         (Module): If the status is missing at the last wave but we know          deviation (needs data from the Hessian matrices) which slows the
         that the person is alive, then we can code his/her status as -2          computation.
         (instead of missing=-1 in earlier versions) and his/her          In the future we should be able to stop the program is only health
         contributions to the likelihood is 1 - Prob of dying from last          expectancies and graph are needed without standard deviations.
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  
         the healthy state at last known wave). Version is 0.98  2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
 2004-05-20  Brouard Nicolas  <brouard@localhost>          * imach.iss (Module): 
   
         * imach.c (Repository):          * imach.c (Module): bugs in evsi + population file added in htm output file
         Agnes added a direct estimation of mortality (without the need of  
         computing period prevalence and differential mortality). Thus here  2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         is version 0.97a which has been distributed to some people at  
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of          * imach.c (Module): 
         mortality using covariates is not done today. Estimating direct  
         mortality is a very different process because it doesn't need  2006-03-20  Brouard Nicolas  <brouard@localhost>
         interpolation because it is easy to get the lx from the force of  
         the mortality mux in the simplest case as for a Gompertz (log mux          * imach.c (Module): <title> changed, corresponds to .htm file
         = a + b*x . But we have been able to incorporate the new code          name. <head> headers where missing.
         within former imach program (0.96d) without deteriorating too much  
         the understanding of the program.          * Makefile (Module): 0.98g
   
 2003-06-25    <brouard@BROUARD>          * imach.c (Module): Weights can have a decimal point as for
           English (a comma might work with a correct LC_NUMERIC environment,
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't          otherwise the weight is truncated).
         exist so I changed back to asctime which exists.          Modification of warning when the covariates values are not 0 or
         (Module): Version 0.96b          1. 
           Version 0.98g
 2003-06-24    <brouard@BROUARD>  
   2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         * imach.c (Module): Some bugs corrected for windows. Also, when  
         mle=-1 a template is output in file "or"mypar.txt with the design          * imach.c (Module): Comments concerning covariates added
         of the covariance matrix to be input.  
           * noreg-setup.iss (Module): Version 0.98f
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
         * imach.c (Repository): Duplicated warning errors corrected.  
         (Repository): Elapsed time after each iteration is now output. It          * imach.c (Module): refinements in the computation of lli if
         helps to forecast when convergence will be reached. Elapsed time          status=-2 in order to have more reliable computation if stepm is
         is stamped in powell.  We created a new html file for the graphs          not 1 month. Version 0.98f
         concerning matrix of covariance. It has extension -cov.htm.  
   2006-03-15  Brouard Nicolas  <brouard@localhost>
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): Bug if status = -2, the loglikelihood was
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.          computed as likelihood omitting the logarithm. Version O.98e
   
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  2006-03-14  Brouard Nicolas  <brouard@localhost>
   
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96          * imach.c (Module): varevsij Comments added explaining the second
           table of variances if popbased=1 .
 2003-06-17  Brouard Nicolas  <brouard@homebrou>          (Module): Covariances of eij, ekl added, graphs fixed, new html link.
           (Module): Function pstamp added
           (Module): Version 0.98d 
         * imach.c (Repository): Check when date of death was earlier that  
         current date of interview. It may happen when the death was just  2006-03-06  Brouard Nicolas  <brouard@localhost>
         prior to the death. In this case, dh was negative and likelihood  
         was wrong (infinity). We still send an "Error" but patch by          * imach.c (Module): Variance-covariance wrong links and
         assuming that the date of death was just one stepm after the          varian-covariance of ej. is needed (Saito).
         interview.  
         (Repository): Because some people have very long ID (first column)  2006-02-27  Brouard Nicolas  <brouard@localhost>
         we changed int to long in num[] and we added a new lvector for  
         memory allocation. But we also truncated to 8 characters (left          * imach.c (Module): One freematrix added in mlikeli!
         truncation)  
   2006-02-26  Brouard Nicolas  <brouard@localhost>
         (Repository): No more line truncation errors.  
           * imach.c (Module): Some improvements in processing parameter
 2003-06-14  Brouard Nicolas  <brouard@homebrou>          filename with strsep.
   
         * imach.c (Repository): Add of a routine likelione (likelihood  2006-02-24  Brouard Nicolas  <brouard@localhost>
         only once) which prints on a text file  
         (ilk) the contributions to the likelihood for each          * imach.c (Module): Memory leaks checks with valgrind and:
         individual/wave.          datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  
         * imach.c (Repository): Replace "freqsummary" at a correct  2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         place. It differs from routine "prevalence" which may be called  
         many times. Probs is memory consuming and must be used with          * strsep.c (Module): Inclusion because not in mingw32!!!
         parcimony.  
           * setup.iss.in (Module): IMACHSETUPVERSION added
 2003-06-17    <brouard@BROUARD>  
           * noreg-setup.iss (Module): added to cvs tree
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.          * Makefile (Module): IMACHSETUPVERSION added
   
 2003-05-16  Brouard Nicolas  <brouard@brouard>  2006-01-30  BROUARD Nicolas  <brouard@localhost>
         * imach.c (Module): Insert of a warning if the delay between two  
         waves is negative.          * Makefile (Module, Module): Latest Makefile
   
         * imach.c (Module):          * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
 2003-05-03    <brouard@BROUARD>  2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
         * imach.c: Some cleaning          * noreg-setup.iss (Module): ADDED
   
 2003-03-28    <brouard@BROUARD>  2006-01-24  BROUARD Nicolas  <brouard@localhost>
         * imach.c (Module): In version up to 0.92 likelihood was computed  
         as if date of death was unknown. Death was treated as any other          * imach.c (Module): Comments (lines starting with a #) are allowed in data.
         health state: the date of the interview describes the actual state  
         and not the date of a change in health state. The former idea was  2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
         to consider that at each interview the state was recorded  
         (healthy, disable or death) and IMaCh was corrected; but when we          * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
         introduced the exact date of death then we should have modified  
         the contribution of an exact death to the likelihood. This new          * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
         contribution is smaller and very dependent of the step unit  
         stepm. It is no more the probability to die between last interview  2005-09-30    <lievre@PC_00595>
         and month of death but the probability to survive from last  
         interview up to one month before death multiplied by the          * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
         probability to die within a month. Thanks to Chris          (Module): If the status is missing at the last wave but we know
         Jackson for correcting this bug.  Former versions increased          that the person is alive, then we can code his/her status as -2
         mortality artificially. The bad side is that we add another loop          (instead of missing=-1 in earlier versions) and his/her
         which slows down the processing. The difference can be up to 10%          contributions to the likelihood is 1 - Prob of dying from last
         lower mortality.          health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
 2002-05-30    <brouard@BROUARD>  
         *  2004-05-20  Brouard Nicolas  <brouard@localhost>
         * imach.c (Module): Add correlation matrix of one-step  
         probabilities and covariance matrix          * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

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changed lines
  Added in v.1.65


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