[BACK]Return to ChangeLog CVS log [TXT] [DIR] Up to [Local Repository] / imach / src

Diff for /imach/src/ChangeLog between versions 1.6 and 1.14

version 1.6, 2003/06/17 20:16:05 version 1.14, 2005/10/25 12:30:34
Line 1 Line 1
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
         * imach.c (Repository): Check when date of death was earlier that          * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
         current date of interview. It may happen when the death was just  
         prior to the death. In this case, dh was negative and likelihood          * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
         was wrong (infinity). We still send an "Error" but patch by  
         assuming that the date of death was just one stepm after the  2005-09-30    <lievre@PC_00595>
         interview.  
         (Repository): Because some people have very long ID (first column)          * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
         we changed int to long in num[] and we added a new lvector for          (Module): If the status is missing at the last wave but we know
         memory allocation. But we also truncated to 8 characters (left          that the person is alive, then we can code his/her status as -2
         truncation)          (instead of missing=-1 in earlier versions) and his/her
         (Repository): No more line truncation errors.          contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
 2003-06-14  Brouard Nicolas  <brouard@homebrou>          the healthy state at last known wave). Version is 0.98
   
         * imach.c (Repository): Add of a routine likelione (likelihood  2004-05-20  Brouard Nicolas  <brouard@localhost>
         only once) which prints on a text file  
         (ilk) the contributions to the likelihood for each          * imach.c (Repository):
         individual/wave.          Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
 2003-06-13  Brouard Nicolas  <brouard@homebrou>          is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
         * imach.c (Repository): Replace "freqsummary" at a correct          mortality using covariates is not done today. Estimating direct
         place. It differs from routine "prevalence" which may be called          mortality is a very different process because it doesn't need
         many times. Probs is memory consuming and must be used with          interpolation because it is easy to get the lx from the force of
         parcimony.          the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
 2003-06-17    <brouard@BROUARD>          within former imach program (0.96d) without deteriorating too much
           the understanding of the program.
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.  2003-06-25    <brouard@BROUARD>
   
 2003-05-16  Brouard Nicolas  <brouard@brouard>          * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
         * imach.c (Module): Insert of a warning if the delay between two          (Module): Version 0.96b
         waves is negative.  
   2003-06-24    <brouard@BROUARD>
         * imach.c (Module):  
           * imach.c (Module): Some bugs corrected for windows. Also, when
 2003-05-03    <brouard@BROUARD>          mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
         * imach.c: Some cleaning  
 2003-03-28    <brouard@BROUARD>  2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
         * imach.c (Module): In version up to 0.92 likelihood was computed          * imach.c (Repository): Duplicated warning errors corrected.
         as if date of death was unknown. Death was treated as any other          (Repository): Elapsed time after each iteration is now output. It
         health state: the date of the interview describes the actual state          helps to forecast when convergence will be reached. Elapsed time
         and not the date of a change in health state. The former idea was          is stamped in powell.  We created a new html file for the graphs
         to consider that at each interview the state was recorded          concerning matrix of covariance. It has extension -cov.htm.
         (healthy, disable or death) and IMaCh was corrected; but when we  
         introduced the exact date of death then we should have modified  2003-06-23  Brouard Nicolas  <brouard@homebrou>
         the contribution of an exact death to the likelihood. This new  
         contribution is smaller and very dependent of the step unit          * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
         stepm. It is no more the probability to die between last interview  
         and month of death but the probability to survive from last  2003-06-18  Brouard Nicolas  <brouard@homebrou>
         interview up to one month before death multiplied by the  
         probability to die within a month. Thanks to Chris          * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
         Jackson for correcting this bug.  Former versions increased  
         mortality artificially. The bad side is that we add another loop  2003-06-17  Brouard Nicolas  <brouard@homebrou>
         which slows down the processing. The difference can be up to 10%  
         lower mortality.  
           * imach.c (Repository): Check when date of death was earlier that
 2002-05-30    <brouard@BROUARD>          current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
         *          was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
         * imach.c (Module): Add correlation matrix of one-step          interview.
         probabilities and covariance matrix          (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module):
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
   
   
           which slows down the processing. The difference can be up to 10%
   
   
           lower mortality.
   
   
   
   
   
   2002-05-30    <brouard@BROUARD>
   
   
   
   
   
           *
   
   
   
   
   
           * imach.c (Module): Add correlation matrix of one-step
   
   
           probabilities and covariance matrix
   
   
   
   
   
Removed from v.1.6  
changed lines
  Added in v.1.14

FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>