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version 1.64, 2023/04/29 10:53:45
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version 1.69, 2024/04/30 10:58:21
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2024-04-30 Nicolas Brouard <brouard@ined.fr> |
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* (Module): In version 0.99s4, we incorporated the calculation of |
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the std error of the proportion of total life expectancy spent in |
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a specific state Var(e.j/e..) using the formula of Var(X/Y) |
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depending only of the variances of X and Y and expectancies. |
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2024-04-24 Nicolas Brouard <brouard@ined.fr> |
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* (Module): This version comes late after having tested |
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successfully the praxis C version of Buckhardt. But Buckardt's |
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version was difficult to read and Gegenfurtner's version had a few |
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typos which made its results less reliable than Buckhardt's |
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results. The most important work consisted in retyping the Brent |
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original PRAXIS program written in Algol W (published with errors, |
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ommitting the transposition of matrix V before its QR reduction |
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from Golub. I used the recent "awe" compiler from Gkynn Webster. |
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The awe library had errors, for example in arc tangent function |
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which have been fixed. |
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The main objective was to get identical results with the three |
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versions: (1) Algol W, (2) Buckhardt'C version as well (3) |
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Gegenfürtner C versions on the various test functions published by |
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Brent in 1973 in Algol W. |
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Also, in order to compare them, the random function had to produce |
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the same sequence for the 3 softwares. The random function used in |
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imach corresponds to original Brent's random function written in |
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Algol W. Other point, in Algol W, the arrays of dimension n are |
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'normal' mathematical arrays starting from 1 to n. But this is a |
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real issue in C where, by default, arrays are starting from 0 to |
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n-1. In Buckhardt, as well as in Gegenfürtner C code, it can be |
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seen that authors while trying to mimick original Brent Algol W |
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code are hesitating by changing either a loop originally from 1 to |
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n in a loop from 0 to n-1, or keeping Brent's loop from 1 to n and |
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shifting the index from original X(I) in Algol W to x[i-1] in C. |
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But as IMaCh is using, since the beginning, the Numerical Recipes |
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functions vector or matrix, I changed Geggenfürtner code to mimick |
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the original Algol W arrays. Thus the X(I) is translated in C as |
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x[i] which minimizes the errors. The Golub QR algorithm was |
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published in Algol with overflow errors which were reproduced in |
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Brent's Algol W code. Buckhardt code fixed these errors which are |
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much more problematic in C than in Algol W. Thus Buckhardt code |
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seems very safe, but i haven't chosen it for IMaCh because the C |
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style is horrible and almost unreadable compared to Gegenfürtner |
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CO code which is very close to Brent's original. Also what makes |
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Buckhardt code more difficult to read is, instead of passing the |
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minimum of parameters in the functions calls, as it is in Algol |
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Brent's code or Gegenfürtner's code, the list of parameters is |
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high. For example, the flin function LONG REAL PROCEDURE FLIN |
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(LONG REAL VALUE L) has only one parameter in Algol W, the |
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Gegenfürtner flin function had two parameters: static double |
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flin(l, j) double l; { int i; double tflin[N];} but Buckhardt |
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function has 14 parameters which makes the code unreadable and |
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useless. Gegenfürtner used a lot of static variables or functions |
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which I tried to minimize. Also in Gegefürtner, array dimensions |
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were fixed to N. In my adaptation the flin is static double |
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flin(double l, int j) and the parameter used are global variables. |
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2023-06-14 Nicolas Brouard <brouard@ined.fr> |
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* imach.c (Module): Testing if conjugate gradient could be quicker |
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when lot of variables POWELLORIGINCONJUGATE |
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2023-05-23 Nicolas Brouard <brouard@ined.fr> |
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* imach.c (Module): Fixed PROB_r |
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2023-05-22 Nicolas Brouard <brouard@ined.fr> |
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* imach.c (Module): In the ILK....txt file, the number of columns |
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before the covariates values is dependent of the number of states (16+nlstate): 0.99r46 |
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2023-05-08 Nicolas Brouard <brouard@ined.fr> |
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* (Module): Error V0 when result:. and model 1+age+V1: fixed |
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| 2023-04-29 Nicolas Brouard <brouard@ined.fr> |
2023-04-29 Nicolas Brouard <brouard@ined.fr> |
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| * imach.c (Module): Inverting the model equation and fixingg bugs |
* imach.c (Module): Inverting the model equation and fixingg bugs |
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Line 184
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| 2022-06-02 Brouard Nicolas <brouard@brouard.name>
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2022-06-02 Brouard Nicolas <brouard@brouard.name>
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| * imach.c (Module): Adding the Wald tests from the log to the main
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* imach.c (Module): Adding the Wald tests from the log to the main
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| htm for better display of the maximum likelihood estimators.
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htm for better display of the maximum likelihood estimators. |
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| 2022-05-30 Brouard Nicolas <brouard@brouard.name>
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2022-05-30 Brouard Nicolas <brouard@brouard.name> |
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| * imach.c: With products of covariates (age or dummies or
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* imach.c: With products of covariates (age or dummies or |
| quantitatives), estimates of parameters were good but when
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quantitatives), estimates of parameters were good but when |
| estimating variances the positions of newly created covariates
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estimating variances the positions of newly created covariates |
| were wrongly assigned and results were wrong. Thank to Feinua_Sun!
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were wrongly assigned and results were wrong. Thank to Feinua_Sun! |
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| 2022-05-24 Nicolas Brouard <brouard@ined.fr>
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2022-05-24 Nicolas Brouard <brouard@ined.fr> |
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| * imach.c (Module): Some attempts to find a bug of wrong estimates
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* imach.c (Module): Some attempts to find a bug of wrong estimates |
| of confidencce intervals with product in the equation modelC
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of confidencce intervals with product in the equation modelC |
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| 2022-05-15 Nicolas Brouard <brouard@ined.fr>
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2022-05-15 Nicolas Brouard <brouard@ined.fr> |
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| * imach.c (Module): Some minor improvements
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* imach.c (Module): Some minor improvements |
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| 2022-04-13 Brouard Nicolas <brouard@brouard.name>
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2022-04-13 Brouard Nicolas <brouard@brouard.name> |
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| * imach.c (Module): Adding link to text data files
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* imach.c (Module): Adding link to text data files |
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| 2022-04-11 Nicolas Brouard <brouard@ined.fr>
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2022-04-11 Nicolas Brouard <brouard@ined.fr> |
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| * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
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* imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed |
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| 2022-04-05 Brouard Nicolas <brouard@ined.fr>
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2022-04-05 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c (Module): Fixed covariates (dummy or quantitative)
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* imach.c (Module): Fixed covariates (dummy or quantitative) |
| with missing values have never been allowed but are ERRORS and
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with missing values have never been allowed but are ERRORS and |
| program quits. Standard deviations of fixed covariates were
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program quits. Standard deviations of fixed covariates were |
| wrongly computed. Mean and standard deviations of time varying
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wrongly computed. Mean and standard deviations of time varying |
| covariates are still not computed.
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covariates are still not computed. |
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| 2022-03-17 Brouard Nicolas <brouard@ined.fr>
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2022-03-17 Brouard Nicolas <brouard@ined.fr> |
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| * 99r25 Improvements in fixing discrepancies between covariates
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* 99r25 Improvements in fixing discrepancies between covariates |
| missing in result line but in model.
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missing in result line but in model. |
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| *Wed Mar 31 2021 Nicolas Brouard <brouard@ined.fr>
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*Wed Mar 31 2021 Nicolas Brouard <brouard@ined.fr> |
| * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
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* imach.c (Module): Still bugs in the result loop. Thank to Holly Benett |
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| *2021-03-08 Nicolas Brouard <brouard@ined.fr>
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*2021-03-08 Nicolas Brouard <brouard@ined.fr> |
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| * ./ (Module): Fixed bug on result:
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* ./ (Module): Fixed bug on result: |
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| *2021-02-20 Nicolas Brouard <brouard@ined.fr>
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*2021-02-20 Nicolas Brouard <brouard@ined.fr> |
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| * imach.c (Module): Fix bug on quitting after result lines!
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* imach.c (Module): Fix bug on quitting after result lines! |
| (Module): Version 0.99r21
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(Module): Version 0.99r21 |
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| 2021-02-12 Nicolas Brouard <brouard@ined.fr>
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2021-02-12 Nicolas Brouard <brouard@ined.fr> |
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| * imach.c (Module): The use of a Windows BOM (huge) file is now an error
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* imach.c (Module): The use of a Windows BOM (huge) file is now an error |
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| 2021-02-11 Nicolas Brouard <brouard@ined.fr>
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2021-02-11 Nicolas Brouard <brouard@ined.fr> |
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| * (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
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* (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed. |
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| 2020-02-22 Brouard Nicolas <brouard@ined.fr>
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2020-02-22 Brouard Nicolas <brouard@ined.fr> |
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| * (Module): imach.c Update mle=-3 (for computing Life expectancy
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* (Module): imach.c Update mle=-3 (for computing Life expectancy |
| and life table from the data without any state)
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and life table from the data without any state) |
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| 2019-05-20 Brouard Nicolas <brouard@ined.fr>
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2019-05-20 Brouard Nicolas <brouard@ined.fr> |
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| * version.h: Summary: version 0.99.r19
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* version.h: Summary: version 0.99.r19 |
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| * imach.c: Summary: Projection syntax simplified
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* imach.c: Summary: Projection syntax simplified |
| We can now start projections, forward or backward, from the mean date
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We can now start projections, forward or backward, from the mean date |
| of inteviews up to or down to a number of years of projection:
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of inteviews up to or down to a number of years of projection: |
| prevforecast=1 yearsfproj=15.3 mobil_average=0
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prevforecast=1 yearsfproj=15.3 mobil_average=0 |
| or
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or |
| prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
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prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0 |
| or
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or |
| prevbackcast=1 yearsbproj=12.3 mobil_average=1
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prevbackcast=1 yearsbproj=12.3 mobil_average=1 |
| or
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or |
| prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
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prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1 |
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| 2019-05-18 Brouard Nicolas <brouard@ined.fr>
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2019-05-18 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: doxygen tex bug
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* imach.c: Summary: doxygen tex bug |
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| 2019-05-16 Brouard Nicolas <brouard@ined.fr>
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2019-05-16 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: There was some wrong lines added
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* imach.c: Summary: There was some wrong lines added |
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| 2019-05-09 Brouard Nicolas <brouard@ined.fr>
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2019-05-09 Brouard Nicolas <brouard@ined.fr> |
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| * Makefile, imach.c: *** empty log message ***
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* Makefile, imach.c: *** empty log message *** |
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| * ChangeLog: Summary: C=
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* ChangeLog: Summary: C= |
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| * imach.c: Summary: Some updates
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* imach.c: Summary: Some updates |
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| * imach.c: Summary: Before ncovmax
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* imach.c: Summary: Before ncovmax |
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| * version.h: *** empty log message ***
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* version.h: *** empty log message *** |
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| * imach.c: Summary: 0.99r18 unlimited number of individuals
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* imach.c: Summary: 0.99r18 unlimited number of individuals |
| The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
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The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur. |
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| 2018-12-13 Brouard Nicolas <brouard@ined.fr>
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2018-12-13 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Bug for young ages (<-30) will be in r17
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* imach.c: Summary: Bug for young ages (<-30) will be in r17 |
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| 2018-12-05 Brouard Nicolas <brouard@ined.fr>
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2018-12-05 Brouard Nicolas <brouard@ined.fr> |
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| * Makefile: Summary: 0.99r16
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* Makefile: Summary: 0.99r16 |
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| 2018-05-02 Brouard Nicolas <brouard@ined.fr>
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2018-05-02 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Some bugs fixed
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* imach.c: Summary: Some bugs fixed |
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| 2018-05-02 Brouard Nicolas <brouard@ined.fr>
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2018-05-02 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Bug for young ages (<-30) will be in r17
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* imach.c: Summary: Bug for young ages (<-30) will be in r17 |
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| 2018-05-02 Brouard Nicolas <brouard@ined.fr>
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2018-05-02 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Some bugs fixed
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* imach.c: Summary: Some bugs fixed |
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| 2018-05-01 Brouard Nicolas <brouard@ined.fr>
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2018-05-01 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c:
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* imach.c: |
| Summary: Bug fixed by providing frequencies only for non missing covariates
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Summary: Bug fixed by providing frequencies only for non missing covariates |
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| 2018-04-27 Brouard Nicolas <brouard@ined.fr>
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2018-04-27 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: some minor bugs
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* imach.c: Summary: some minor bugs |
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| 2018-04-21 Brouard Nicolas <brouard@ined.fr>
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2018-04-21 Brouard Nicolas <brouard@ined.fr> |
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| * README.txt: *** empty log message ***
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* README.txt: *** empty log message *** |
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| * imach.c: Summary: Some bugs fixed, valgrind tested
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* imach.c: Summary: Some bugs fixed, valgrind tested |
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| 2018-04-20 Brouard Nicolas <brouard@ined.fr>
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2018-04-20 Brouard Nicolas <brouard@ined.fr> |
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| * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
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* Makefile, README.txt, setup.iss: Summary: imach 0.99r16 |
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| * imach.c:
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* imach.c: |
| Summary: Computing mean and stdeviation of fixed quantitative variables
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Summary: Computing mean and stdeviation of fixed quantitative variables |
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| 2018-04-19 Brouard Nicolas <brouard@ined.fr>
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2018-04-19 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Some minor bugs fixed
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* imach.c: Summary: Some minor bugs fixed |
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| * version.h: *** empty log message ***
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* version.h: *** empty log message *** |
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| 2018-02-27 Brouard Nicolas <brouard@ined.fr>
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2018-02-27 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: *** empty log message ***
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* imach.c: *** empty log message *** |
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| * imach.c: Summary: Adding second argument for quitting
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* imach.c: Summary: Adding second argument for quitting |
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| 2018-02-21 Brouard Nicolas <brouard@ined.fr>
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2018-02-21 Brouard Nicolas <brouard@ined.fr> |
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| * Makefile, README.txt, imach.c: Summary: 0.99r15
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* Makefile, README.txt, imach.c: Summary: 0.99r15 |
| New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
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New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c |
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| 2017-07-20 Brouard Nicolas <brouard@ined.fr>
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2017-07-20 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: temporary working
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* imach.c: Summary: temporary working |
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| 2017-07-19 Brouard Nicolas <brouard@ined.fr>
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2017-07-19 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
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* imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?) |
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| 2017-07-17 Brouard Nicolas <brouard@ined.fr>
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2017-07-17 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: BOM files can be read now
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* imach.c: Summary: BOM files can be read now |
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| 2017-06-30 Brouard Nicolas <brouard@ined.fr>
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2017-06-30 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Graphs improvements
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* imach.c: Summary: Graphs improvements |
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| * imach.c: Summary: Saito's color
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* imach.c: Summary: Saito's color |
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| 2017-06-29 Brouard Nicolas <brouard@ined.fr>
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2017-06-29 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Version 0.99r14
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* imach.c: Summary: Version 0.99r14 |
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| 2017-06-27 Brouard Nicolas <brouard@ined.fr>
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2017-06-27 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: More documentation on projections
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* imach.c: Summary: More documentation on projections |
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| * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
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* imach.c: Summary: Color of backprojection changed from 6 to 5(yellow) |
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| * imach.c: Summary: Some bug with rint
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* imach.c: Summary: Some bug with rint |
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| 2017-05-24 Brouard Nicolas <brouard@ined.fr>
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2017-05-24 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: *** empty log message ***
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* imach.c: *** empty log message *** |
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| 2017-05-23 Brouard Nicolas <brouard@ined.fr>
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2017-05-23 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Code into subroutine, cleanings
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* imach.c: Summary: Code into subroutine, cleanings |
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| 2017-05-18 Brouard Nicolas <brouard@ined.fr>
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2017-05-18 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c:
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* imach.c: |
| Summary: backprojection and confidence intervals of backprevalence
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Summary: backprojection and confidence intervals of backprevalence |
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| 2017-05-13 Brouard Nicolas <brouard@ined.fr>
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2017-05-13 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: temporary save for backprojection
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* imach.c: Summary: temporary save for backprojection |
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| * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
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* imach.c: Summary: Version 0.99r13 (improvements and bugs fixed) |
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| 2017-04-26 Brouard Nicolas <brouard@ined.fr>
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2017-04-26 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: imach 0.99r13 Some bugs fixed
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* imach.c: Summary: imach 0.99r13 Some bugs fixed |
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| * imach.c: Summary: Labels in graphs
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* imach.c: Summary: Labels in graphs |
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| 2017-04-24 Brouard Nicolas <brouard@ined.fr>
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2017-04-24 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: to save
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* imach.c: Summary: to save |
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| 2017-04-18 Brouard Nicolas <brouard@ined.fr>
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2017-04-18 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: *** empty log message ***
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* imach.c: *** empty log message *** |
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| 2017-04-05 Brouard Nicolas <brouard@ined.fr>
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2017-04-05 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
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* imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1 |
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| 2017-04-04 Brouard Nicolas <brouard@ined.fr>
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2017-04-04 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Gnuplot indexations fixed (humm)
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* imach.c: Summary: Gnuplot indexations fixed (humm) |
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| * imach.c:
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* imach.c: |
| Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
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Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3 |
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| 2017-04-03 Brouard Nicolas <brouard@ined.fr>
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2017-04-03 Brouard Nicolas <brouard@ined.fr> |
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| * imach.c: Summary: Version 0.99r12
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* imach.c: Summary: Version 0.99r12 |
| Some cleanings, conformed with updated documentation.
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Some cleanings, conformed with updated documentation. |
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|
|
| 2017-03-30 Brouard Nicolas <brouard@ined.fr>
|
2017-03-30 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * version.h: *** empty log message ***
|
* version.h: *** empty log message *** |
|
|
|
| * version.h: Summary:0.99r11
|
* version.h: Summary:0.99r11 |
|
|
|
| 2017-03-29 Brouard Nicolas <brouard@ined.fr>
|
2017-03-29 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Temp
|
* imach.c: Summary: Temp |
|
|
|
| 2017-03-27 Brouard Nicolas <brouard@ined.fr>
|
2017-03-27 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Temporary
|
* imach.c: Summary: Temporary |
|
|
|
| 2017-03-08 Brouard Nicolas <brouard@ined.fr>
|
2017-03-08 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
|
* imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed |
|
|
|
| * imach.c: Summary: Fixing data parameter line
|
* imach.c: Summary: Fixing data parameter line |
|
|
|
| 2016-12-15 Brouard Nicolas <brouard@ined.fr>
|
2016-12-15 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: 0.99 in progress
|
* imach.c: Summary: 0.99 in progress |
|
|
|
| 2016-09-15 Brouard Nicolas <brouard@ined.fr>
|
2016-09-15 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: *** empty log message ***
|
* imach.c: *** empty log message *** |
|
|
|
| * imach.c: Summary: not working
|
* imach.c: Summary: not working |
|
|
|
| 2016-09-08 Brouard Nicolas <brouard@ined.fr>
|
2016-09-08 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: continue
|
* imach.c: Summary: continue |
|
|
|
| 2016-09-07 Brouard Nicolas <brouard@ined.fr>
|
2016-09-07 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Starting values from frequencies
|
* imach.c: Summary: Starting values from frequencies |
|
|
|
| * imach.c: *** empty log message ***
|
* imach.c: *** empty log message *** |
|
|
|
| 2016-09-02 Brouard Nicolas <brouard@ined.fr>
|
2016-09-02 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: *** empty log message ***
|
* imach.c: *** empty log message *** |
|
|
|
| 2016-08-30 Brouard Nicolas <brouard@ined.fr>
|
2016-08-30 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Fixing a lots
|
* imach.c: Summary: Fixing a lots |
|
|
|
| 2016-08-29 Brouard Nicolas <brouard@ined.fr>
|
2016-08-29 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: gnuplot problem in Back projection to fix
|
* imach.c: Summary: gnuplot problem in Back projection to fix |
|
|
|
| * imach.c: Summary: Better
|
* imach.c: Summary: Better |
|
|
|
| 2016-08-26 Brouard Nicolas <brouard@ined.fr>
|
2016-08-26 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c:
|
* imach.c: |
| Summary: Improvement in Powell output in order to copy and paste
|
Summary: Improvement in Powell output in order to copy and paste |
|
|
|
| * imach.c: Summary: Starting tests of 0.99
|
* imach.c: Summary: Starting tests of 0.99 |
|
|
|
| * imach.c: Summary: to valgrind
|
* imach.c: Summary: to valgrind |
|
|
|
| 2016-08-25 Brouard Nicolas <brouard@ined.fr>
|
2016-08-25 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: *** empty log message ***
|
* imach.c: *** empty log message *** |
|
|
|
| 2016-08-23 Brouard Nicolas <brouard@ined.fr>
|
2016-08-23 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: *** empty log message ***
|
* imach.c: *** empty log message *** |
|
|
|
| * imach.c: Summary: not working
|
* imach.c: Summary: not working |
|
|
|
| 2016-08-22 Brouard Nicolas <brouard@ined.fr>
|
2016-08-22 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: not working
|
* imach.c: Summary: not working |
|
|
|
| * imach.c: Summary: Not working
|
* imach.c: Summary: Not working |
|
|
|
| 2016-07-23 Brouard Nicolas <brouard@ined.fr>
|
2016-07-23 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Completing for func too
|
* imach.c: Summary: Completing for func too |
|
|
|
| 2016-07-22 Brouard Nicolas <brouard@ined.fr>
|
2016-07-22 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Fixing some arrays, still debugging
|
* imach.c: Summary: Fixing some arrays, still debugging |
|
|
|
| 2016-07-21 Brouard Nicolas <brouard@ined.fr>
|
2016-07-21 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c:
|
* imach.c: |
| Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
|
Summary: 0.99 working (more or less) for Asian Workshop on multitate methods |
|
|
|
| 2016-07-12 Brouard Nicolas <brouard@ined.fr>
|
2016-07-12 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: temp
|
* imach.c: Summary: temp |
|
|
|
| * imach.c: Summary: saving but not running
|
* imach.c: Summary: saving but not running |
|
|
|
| 2016-07-01 Brouard Nicolas <brouard@ined.fr>
|
2016-07-01 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Fixes
|
* imach.c: Summary: Fixes |
|
|
|
| 2016-02-19 Brouard Nicolas <brouard@ined.fr>
|
2016-02-19 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
|
* imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7 |
|
|
|
| * setup.iss, Makefile, version.h: *** empty log message ***
|
* setup.iss, Makefile, version.h: *** empty log message *** |
|
|
|
| * imach.c: Summary: temporary
|
* imach.c: Summary: temporary |
|
|
|
| 2016-02-17 Brouard Nicolas <brouard@ined.fr>
|
2016-02-17 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Probably last 0.98 stable version 0.98r6
|
* imach.c: Summary: Probably last 0.98 stable version 0.98r6 |
|
|
|
| 2016-02-16 Brouard Nicolas <brouard@ined.fr>
|
2016-02-16 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: minor bug
|
* imach.c: Summary: minor bug |
|
|
|
| * imach.c: Summary: 0.99r2
|
* imach.c: Summary: 0.99r2 |
|
|
|
| 2016-02-15 Brouard Nicolas <brouard@ined.fr>
|
2016-02-15 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: *** empty log message ***
|
* imach.c: *** empty log message *** |
|
|
|
| 2016-02-12 Brouard Nicolas <brouard@ined.fr>
|
2016-02-12 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: 0.99 Back projections
|
* imach.c: Summary: 0.99 Back projections |
|
|
|
| 2015-12-23 Brouard Nicolas <brouard@ined.fr>
|
2015-12-23 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Experimental backcast
|
* imach.c: Summary: Experimental backcast |
|
|
|
| 2015-12-18 Brouard Nicolas <brouard@ined.fr>
|
2015-12-18 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: 0.98r4 Warning and status=-2
|
* imach.c: Summary: 0.98r4 Warning and status=-2 |
|
|
|
| Version 0.98r4 is now:
|
Version 0.98r4 is now: |
| - displaying an error when status is -1, date of interview unknown and date of death known;
|
- displaying an error when status is -1, date of interview unknown and date of death known; |
| - permitting a status -2 when the vital status is unknown at a known date of right truncation.
|
- permitting a status -2 when the vital status is unknown at a known date of right truncation. |
| Older changes concerning s=-2, dating from 2005 have been supersed.
|
Older changes concerning s=-2, dating from 2005 have been supersed. |
|
|
|
| * Makefile: *** empty log message ***
|
* Makefile: *** empty log message *** |
|
|
|
| 2015-12-16 Brouard Nicolas <brouard@ined.fr>
|
2015-12-16 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * Makefile: *** empty log message ***
|
* Makefile: *** empty log message *** |
|
|
|
| * imach.c: Summary: 0.98r4 working
|
* imach.c: Summary: 0.98r4 working |
|
|
|
| * Makefile: Summary: linuxrpm added
|
* Makefile: Summary: linuxrpm added |
|
|
|
| * Makefile: *** empty log message ***
|
* Makefile: *** empty log message *** |
|
|
|
| * imach.c: Summary: temporary not working
|
* imach.c: Summary: temporary not working |
|
|
|
| 2015-12-11 Brouard Nicolas <brouard@ined.fr>
|
2015-12-11 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: 0.98r4
|
* imach.c: Summary: 0.98r4 |
|
|
|
| 2015-12-08 Brouard Nicolas <brouard@ined.fr>
|
2015-12-08 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * Makefile: *** empty log message ***
|
* Makefile: *** empty log message *** |
|
|
|
| 2015-11-21 Brouard Nicolas <brouard@ined.fr>
|
2015-11-21 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * Makefile:
|
* Makefile: |
| Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
|
Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more |
|
|
|
| * imach.c: Summary: minor typo
|
* imach.c: Summary: minor typo |
|
|
|
| * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
|
* imach.c: Summary: 0.98r3 with some graph of projected cross-sectional |
|
|
|
| Author: Nicolas Brouard
|
Author: Nicolas Brouard |
|
|
|
| 2015-11-18 Brouard Nicolas <brouard@ined.fr>
|
2015-11-18 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Start working on projected prevalences
|
* imach.c: Summary: Start working on projected prevalences |
|
|
|
| 2015-11-17 Brouard Nicolas <brouard@ined.fr>
|
2015-11-17 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Adding ftolpl parameter
|
* imach.c: Summary: Adding ftolpl parameter |
| Author: N Brouard
|
Author: N Brouard |
|
|
|
| We had difficulties to get smoothed confidence intervals. It was due
|
We had difficulties to get smoothed confidence intervals. It was due |
| to the period prevalence which wasn't computed accurately. The inner
|
to the period prevalence which wasn't computed accurately. The inner |
| parameter ftolpl is now an outer parameter of the .imach parameter
|
parameter ftolpl is now an outer parameter of the .imach parameter |
| file after estepm. If ftolpl is small 1.e-4 and estepm too,
|
file after estepm. If ftolpl is small 1.e-4 and estepm too, |
| computation are long.
|
computation are long. |
|
|
|
| * version.h: *** empty log message ***
|
* version.h: *** empty log message *** |
|
|
|
| * imach.c: Summary: temporary
|
* imach.c: Summary: temporary |
|
|
|
| 2015-10-27 Brouard Nicolas <brouard@ined.fr>
|
2015-10-27 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * Makefile: *** empty log message ***
|
* Makefile: *** empty log message *** |
|
|
|
| * setup.iss.in: Summary: some new subdirs
|
* setup.iss.in: Summary: some new subdirs |
|
|
|
| * imach.c: *** empty log message ***
|
* imach.c: *** empty log message *** |
|
|
|
| * setup.iss.in:
|
* setup.iss.in: |
| Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
|
Summary: Adding gnuplot 5.1 with bin and etc for pango fonts |
|
|
|
| 2015-10-24 Brouard Nicolas <brouard@ined.fr>
|
2015-10-24 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: *** empty log message ***
|
* imach.c: *** empty log message *** |
|
|
|
| 2015-10-23 Brouard Nicolas <brouard@ined.fr>
|
2015-10-23 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c:
|
* imach.c: |
| Summary: 0.98r3 some clarification for graphs on likelihood contributions
|
Summary: 0.98r3 some clarification for graphs on likelihood contributions |
|
|
|
| 2015-10-01 Brouard Nicolas <brouard@ined.fr>
|
2015-10-01 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c: Summary: Some new graphs of contribution to likelihood
|
* imach.c: Summary: Some new graphs of contribution to likelihood |
|
|
|
| 2015-09-30 Brouard Nicolas <brouard@ined.fr>
|
2015-09-30 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * Makefile:
|
* Makefile: |
| Summary: Version read from version.h, itself read with cmake
|
Summary: Version read from version.h, itself read with cmake |
|
|
|
| * imach.c: Summary: looking at better estimation of the hessian
|
* imach.c: Summary: looking at better estimation of the hessian |
|
|
|
| Also a better criteria for convergence to the period prevalence And
|
Also a better criteria for convergence to the period prevalence And |
| therefore adding the number of years needed to converge. (The
|
therefore adding the number of years needed to converge. (The |
| prevalence in any alive state shold sum to one
|
prevalence in any alive state shold sum to one |
|
|
|
| * Makefile: *** empty log message ***
|
* Makefile: *** empty log message *** |
|
|
|
| 2015-09-22 Brouard Nicolas <brouard@ined.fr>
|
2015-09-22 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * imach.c:
|
* imach.c: |
| Summary: Adding some overall graph on contribution to likelihood. Might change
|
Summary: Adding some overall graph on contribution to likelihood. Might change |
|
|
|
| 2015-09-15 Brouard Nicolas <brouard@ined.fr>
|
2015-09-15 Brouard Nicolas <brouard@ined.fr> |
|
|
|
| * Makefile: *** empty log message ***
|
* Makefile: *** empty log message *** |
|
|
|
| * imach.c: Summary: 0.98r0
|
* imach.c: Summary: 0.98r0 |
|
|
|
| - Some new graphs like survival functions
|
- Some new graphs like survival functions |
| - Some bugs fixed like model=1+age+V2.
|
- Some bugs fixed like model=1+age+V2. |
|
|
|
| * ChangeLog, Makefile: Summary: 0.98r0
|
* ChangeLog, Makefile: Summary: 0.98r0 |
|
|
|
| * CMakeLists.txt: Summary: Some tests for setup.iss
|
* CMakeLists.txt: Summary: Some tests for setup.iss |
|
|
|
| 2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr>
|
2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr> |
|
|
|
| * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
|
* (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc |
|
|
|
| 2015-08-18 Nicolas J Brouard <nbrouard@tugault.local>
|
2015-08-18 Nicolas J Brouard <nbrouard@tugault.local> |
|
|
|
| * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
|
* (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line. |
|
|
|
| 2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr>
|
2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr> |
|
|
|
| * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
|
* (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih) |
|
|
|
| 2014-12-16 Nicolas J Brouard <nbrouard@tugault.local>
|
2014-12-16 Nicolas J Brouard <nbrouard@tugault.local> |
|
|
|
| * imach.c (Module): Merging 1.61 to 1.162
|
* imach.c (Module): Merging 1.61 to 1.162 |
|
|
|
| 2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr>
|
2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr> |
|
|
|
| * prevlim.h (Module):
|
* prevlim.h (Module): |
|
|
|
| 2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local>
|
2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local> |
|
|
|
| * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
|
* imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested... |
| (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
|
(Module): Version 0.98nR Running ok, but output format still only works for three covariates. |
|
|
|
| 2010-04-29 brouard <brouard@ined.fr>
|
2010-04-29 brouard <brouard@ined.fr> |
|
|
|
| * imach.c (Module): Checking covariates for more complex models
|
* imach.c (Module): Checking covariates for more complex models |
| than V1+V2. A lot of change to be done. Unstable.
|
than V1+V2. A lot of change to be done. Unstable. |
|
|
|
| 2010-04-26 brouard <brouard@ined.fr>
|
2010-04-26 brouard <brouard@ined.fr> |
|
|
|
| * imach.c (Module): merging some libgsl code. Fixing computation
|
* imach.c (Module): merging some libgsl code. Fixing computation |
| of likelione (using inter/intrapolation if mle = 0) in order to
|
of likelione (using inter/intrapolation if mle = 0) in order to |
| get same likelihood as if mle=1.
|
get same likelihood as if mle=1. |
| Some cleaning of code and comments added.
|
Some cleaning of code and comments added. |
|
|
|
| 2009-10-29 brouard <brouard@ined.fr>
|
2009-10-29 brouard <brouard@ined.fr> |
|
|
|
| * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
|
* imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code. |
|
|
|
| 2006-06-30 Brouard Nicolas <brouard@localhost>
|
2006-06-30 Brouard Nicolas <brouard@localhost> |
|
|
|
| * imach.c (Module): Clarifications on computing e.j
|
* imach.c (Module): Clarifications on computing e.j |
|
|
|
| 2006-04-28 Brouard Nicolas <brouard@localhost>
|
2006-04-28 Brouard Nicolas <brouard@localhost> |
|
|
|
| * imach.c (Module): Yes the sum of survivors was wrong since
|
* imach.c (Module): Yes the sum of survivors was wrong since |
| imach-114 because nhstepm was no more computed in the age
|
imach-114 because nhstepm was no more computed in the age |
| loop. Now we define nhstepma in the age loop.
|
loop. Now we define nhstepma in the age loop. |
| (Module): In order to speed up (in case of numerous covariates) we
|
(Module): In order to speed up (in case of numerous covariates) we |
| compute health expectancies (without variances) in a first step
|
compute health expectancies (without variances) in a first step |
| and then all the health expectancies with variances or standard
|
and then all the health expectancies with variances or standard |
| deviation (needs data from the Hessian matrices) which slows the
|
deviation (needs data from the Hessian matrices) which slows the |
| computation.
|
computation. |
| In the future we should be able to stop the program is only health
|
In the future we should be able to stop the program is only health |
| expectancies and graph are needed without standard deviations.
|
expectancies and graph are needed without standard deviations. |
|
|
|
| 2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr>
|
2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr> |
|
|
|
| * imach.iss (Module):
|
* imach.iss (Module): |
|
|
|
| * imach.c (Module): bugs in evsi + population file added in htm output file
|
* imach.c (Module): bugs in evsi + population file added in htm output file |
|
|
|
| 2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr>
|
2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr> |
|
|
|
| * imach.c (Module):
|
* imach.c (Module): |
|
|
|
| 2006-03-20 Brouard Nicolas <brouard@localhost>
|
2006-03-20 Brouard Nicolas <brouard@localhost> |
|
|
|
| * imach.c (Module): <title> changed, corresponds to .htm file
|
* imach.c (Module): <title> changed, corresponds to .htm file |
| name. <head> headers where missing.
|
name. <head> headers where missing. |
|
|
|
| * Makefile (Module): 0.98g
|
* Makefile (Module): 0.98g |
|
|
|
| * imach.c (Module): Weights can have a decimal point as for
|
* imach.c (Module): Weights can have a decimal point as for |
| English (a comma might work with a correct LC_NUMERIC environment,
|
English (a comma might work with a correct LC_NUMERIC environment, |
| otherwise the weight is truncated).
|
otherwise the weight is truncated). |
| Modification of warning when the covariates values are not 0 or
|
Modification of warning when the covariates values are not 0 or |
| 1.
|
1. |
| Version 0.98g
|
Version 0.98g |
|
|
|
| 2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr>
|
2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr> |
|
|
|
| * imach.c (Module): Comments concerning covariates added
|
* imach.c (Module): Comments concerning covariates added |
|
|
|
| * noreg-setup.iss (Module): Version 0.98f
|
* noreg-setup.iss (Module): Version 0.98f |
|
|
|
| * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
|
* Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup |
|
|
|
| * imach.c (Module): refinements in the computation of lli if
|
* imach.c (Module): refinements in the computation of lli if |
| status=-2 in order to have more reliable computation if stepm is
|
status=-2 in order to have more reliable computation if stepm is |
| not 1 month. Version 0.98f
|
not 1 month. Version 0.98f |
|
|
|
| 2006-03-15 Brouard Nicolas <brouard@localhost>
|
2006-03-15 Brouard Nicolas <brouard@localhost> |
|
|
|
| * imach.c (Module): Bug if status = -2, the loglikelihood was
|
* imach.c (Module): Bug if status = -2, the loglikelihood was |
| computed as likelihood omitting the logarithm. Version O.98e
|
computed as likelihood omitting the logarithm. Version O.98e |
|
|
|
| 2006-03-14 Brouard Nicolas <brouard@localhost>
|
2006-03-14 Brouard Nicolas <brouard@localhost> |
|
|
|
| * imach.c (Module): varevsij Comments added explaining the second
|
* imach.c (Module): varevsij Comments added explaining the second |
| table of variances if popbased=1 .
|
table of variances if popbased=1 . |
| (Module): Covariances of eij, ekl added, graphs fixed, new html link.
|
(Module): Covariances of eij, ekl added, graphs fixed, new html link. |
| (Module): Function pstamp added
|
(Module): Function pstamp added |
| (Module): Version 0.98d
|
(Module): Version 0.98d |
|
|
|
| 2006-03-06 Brouard Nicolas <brouard@localhost>
|
2006-03-06 Brouard Nicolas <brouard@localhost> |
|
|
|
| * imach.c (Module): Variance-covariance wrong links and
|
* imach.c (Module): Variance-covariance wrong links and |
| varian-covariance of ej. is needed (Saito).
|
varian-covariance of ej. is needed (Saito). |
|
|
|
| 2006-02-27 Brouard Nicolas <brouard@localhost>
|
2006-02-27 Brouard Nicolas <brouard@localhost> |
|
|
|
| * imach.c (Module): One freematrix added in mlikeli!
|
* imach.c (Module): One freematrix added in mlikeli! |
|
|
|
| 2006-02-26 Brouard Nicolas <brouard@localhost>
|
2006-02-26 Brouard Nicolas <brouard@localhost> |
|
|
|
| * imach.c (Module): Some improvements in processing parameter
|
* imach.c (Module): Some improvements in processing parameter |
| filename with strsep.
|
filename with strsep. |
|
|
|
| 2006-02-24 Brouard Nicolas <brouard@localhost>
|
2006-02-24 Brouard Nicolas <brouard@localhost> |
|
|
|
| * imach.c (Module): Memory leaks checks with valgrind and:
|
* imach.c (Module): Memory leaks checks with valgrind and: |
| datafile was not closed, some imatrix were not freed and on matrix
|
datafile was not closed, some imatrix were not freed and on matrix |
| allocation too.
|
allocation too. |
|
|
|
| 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr>
|
2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr> |
|
|
|
| * strsep.c (Module): Inclusion because not in mingw32!!!
|
* strsep.c (Module): Inclusion because not in mingw32!!! |
|
|
|
| * setup.iss.in (Module): IMACHSETUPVERSION added
|
* setup.iss.in (Module): IMACHSETUPVERSION added |
|
|
|
| * noreg-setup.iss (Module): added to cvs tree
|
* noreg-setup.iss (Module): added to cvs tree |
|
|
|
| * Makefile (Module): IMACHSETUPVERSION added
|
* Makefile (Module): IMACHSETUPVERSION added |
|
|
|
| 2006-01-30 BROUARD Nicolas <brouard@localhost>
|
2006-01-30 BROUARD Nicolas <brouard@localhost> |
|
|
|
| * Makefile (Module, Module): Latest Makefile
|
* Makefile (Module, Module): Latest Makefile |
|
|
|
| * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
|
* imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe |
|
|
|
| 2006-01-27 BROUARD Nicolas <brouard@localhost>
|
2006-01-27 BROUARD Nicolas <brouard@localhost> |
|
|
|
| * noreg-setup.iss (Module): ADDED
|
* noreg-setup.iss (Module): ADDED |
|
|
|
| 2006-01-24 BROUARD Nicolas <brouard@localhost>
|
2006-01-24 BROUARD Nicolas <brouard@localhost> |
|
|
|
| * imach.c (Module): Comments (lines starting with a #) are allowed in data.
|
* imach.c (Module): Comments (lines starting with a #) are allowed in data. |
|
|
|
| 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr>
|
2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr> |
|
|
|
| * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
|
* Makefile (Module): Added Imach98.pmsp and howto crete a dmg |
|
|
|
| * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
|
* createdmg.sh (Module): Creates a dmg disk for MaC OS/X |
|
|
|
| 2005-09-30 <lievre@PC_00595>
|
2005-09-30 <lievre@PC_00595> |
|
|
|
| * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
|
* imach.c (Module): sump fixed, loop imx fixed, and simplifications. |
| (Module): If the status is missing at the last wave but we know
|
(Module): If the status is missing at the last wave but we know |
| that the person is alive, then we can code his/her status as -2
|
that the person is alive, then we can code his/her status as -2 |
| (instead of missing=-1 in earlier versions) and his/her
|
(instead of missing=-1 in earlier versions) and his/her |
| contributions to the likelihood is 1 - Prob of dying from last
|
contributions to the likelihood is 1 - Prob of dying from last |
| health status (= 1-p13= p11+p12 in the easiest case of somebody in
|
health status (= 1-p13= p11+p12 in the easiest case of somebody in |
| the healthy state at last known wave). Version is 0.98
|
the healthy state at last known wave). Version is 0.98 |
|
|
|
| 2004-05-20 Brouard Nicolas <brouard@localhost>
|
2004-05-20 Brouard Nicolas <brouard@localhost> |
|
|
|
| * imach.c (Repository):
|
* imach.c (Repository): |
| Agnes added a direct estimation of mortality (without the need of
|
Agnes added a direct estimation of mortality (without the need of |
| computing period prevalence and differential mortality). Thus here
|
computing period prevalence and differential mortality). Thus here |
| is version 0.97a which has been distributed to some people at
|
is version 0.97a which has been distributed to some people at |
| REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
|
REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of |
| mortality using covariates is not done today. Estimating direct
|
mortality using covariates is not done today. Estimating direct |
| mortality is a very different process because it doesn't need
|
mortality is a very different process because it doesn't need |
| interpolation because it is easy to get the lx from the force of
|
interpolation because it is easy to get the lx from the force of |
| the mortality mux in the simplest case as for a Gompertz (log mux
|
the mortality mux in the simplest case as for a Gompertz (log mux |
| = a + b*x . But we have been able to incorporate the new code
|
= a + b*x . But we have been able to incorporate the new code |
| within former imach program (0.96d) without deteriorating too much
|
within former imach program (0.96d) without deteriorating too much |
| the understanding of the program.
|
the understanding of the program. |
|
|
|
| 2003-06-25 <brouard@BROUARD>
|
2003-06-25 <brouard@BROUARD> |
|
|
|
| * imach.c (Module): On windows (cygwin) function asctime_r doesn't
|
* imach.c (Module): On windows (cygwin) function asctime_r doesn't |
| exist so I changed back to asctime which exists.
|
exist so I changed back to asctime which exists. |
| (Module): Version 0.96b
|
(Module): Version 0.96b |
|
|
|
| 2003-06-24 <brouard@BROUARD>
|
2003-06-24 <brouard@BROUARD> |
|
|
|
| * imach.c (Module): Some bugs corrected for windows. Also, when
|
* imach.c (Module): Some bugs corrected for windows. Also, when |
| mle=-1 a template is output in file "or"mypar.txt with the design
|
mle=-1 a template is output in file "or"mypar.txt with the design |
| of the covariance matrix to be input.
|
of the covariance matrix to be input. |
|
|
|
| 2003-06-25 Brouard Nicolas <brouard@homebrou>
|
2003-06-25 Brouard Nicolas <brouard@homebrou> |
|
|
|
| * imach.c (Repository): Duplicated warning errors corrected.
|
* imach.c (Repository): Duplicated warning errors corrected. |
| (Repository): Elapsed time after each iteration is now output. It
|
(Repository): Elapsed time after each iteration is now output. It |
| helps to forecast when convergence will be reached. Elapsed time
|
helps to forecast when convergence will be reached. Elapsed time |
| is stamped in powell. We created a new html file for the graphs
|
is stamped in powell. We created a new html file for the graphs |
| concerning matrix of covariance. It has extension -cov.htm.
|
concerning matrix of covariance. It has extension -cov.htm. |
|
|
|
| 2003-06-23 Brouard Nicolas <brouard@homebrou>
|
2003-06-23 Brouard Nicolas <brouard@homebrou> |
|
|
|
| * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
|
* imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things. |
|
|
|
| 2003-06-18 Brouard Nicolas <brouard@homebrou>
|
2003-06-18 Brouard Nicolas <brouard@homebrou> |
|
|
|
| * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
|
* imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96 |
|
|
|
| 2003-06-17 Brouard Nicolas <brouard@homebrou>
|
2003-06-17 Brouard Nicolas <brouard@homebrou> |
|
|
|
|
|
|
| * imach.c (Repository): Check when date of death was earlier that
|
* imach.c (Repository): Check when date of death was earlier that |
| current date of interview. It may happen when the death was just
|
current date of interview. It may happen when the death was just |
| prior to the death. In this case, dh was negative and likelihood
|
prior to the death. In this case, dh was negative and likelihood |
| was wrong (infinity). We still send an "Error" but patch by
|
was wrong (infinity). We still send an "Error" but patch by |
| assuming that the date of death was just one stepm after the
|
assuming that the date of death was just one stepm after the |
| interview.
|
interview. |
| (Repository): Because some people have very long ID (first column)
|
(Repository): Because some people have very long ID (first column) |
| we changed int to long in num[] and we added a new lvector for
|
we changed int to long in num[] and we added a new lvector for |
| memory allocation. But we also truncated to 8 characters (left
|
memory allocation. But we also truncated to 8 characters (left |
| truncation)
|
truncation) |
|
|
|
| (Repository): No more line truncation errors.
|
(Repository): No more line truncation errors. |
|
|
|
| 2003-06-14 Brouard Nicolas <brouard@homebrou>
|
2003-06-14 Brouard Nicolas <brouard@homebrou> |
|
|
|
| * imach.c (Repository): Add of a routine likelione (likelihood
|
* imach.c (Repository): Add of a routine likelione (likelihood |
| only once) which prints on a text file
|
only once) which prints on a text file |
| (ilk) the contributions to the likelihood for each
|
(ilk) the contributions to the likelihood for each |
| individual/wave.
|
individual/wave. |
|
|
|
| 2003-06-13 Brouard Nicolas <brouard@homebrou>
|
2003-06-13 Brouard Nicolas <brouard@homebrou> |
| * imach.c (Repository): Replace "freqsummary" at a correct
|
* imach.c (Repository): Replace "freqsummary" at a correct |
| place. It differs from routine "prevalence" which may be called
|
place. It differs from routine "prevalence" which may be called |
| many times. Probs is memory consuming and must be used with
|
many times. Probs is memory consuming and must be used with |
| parcimony.
|
parcimony. |
|
|
|
| 2003-06-17 <brouard@BROUARD>
|
2003-06-17 <brouard@BROUARD> |
|
|
|
| * timeval.h (Module): Added included file to make use of
|
* timeval.h (Module): Added included file to make use of |
| gettimeofday working on win32 with cygwin.
|
gettimeofday working on win32 with cygwin. |
|
|
|
| 2003-05-16 Brouard Nicolas <brouard@brouard>
|
2003-05-16 Brouard Nicolas <brouard@brouard> |
| * imach.c (Module): Insert of a warning if the delay between two
|
* imach.c (Module): Insert of a warning if the delay between two |
| waves is negative.
|
waves is negative. |
|
|
|
| * imach.c (Module):
|
* imach.c (Module): |
|
|
|
| 2003-05-03 <brouard@BROUARD>
|
2003-05-03 <brouard@BROUARD> |
|
|
|
| * imach.c: Some cleaning
|
* imach.c: Some cleaning |
|
|
|
| 2003-03-28 <brouard@BROUARD>
|
2003-03-28 <brouard@BROUARD> |
| * imach.c (Module): In version up to 0.92 likelihood was computed
|
* imach.c (Module): In version up to 0.92 likelihood was computed |
| as if date of death was unknown. Death was treated as any other
|
as if date of death was unknown. Death was treated as any other |
| health state: the date of the interview describes the actual state
|
health state: the date of the interview describes the actual state |
| and not the date of a change in health state. The former idea was
|
and not the date of a change in health state. The former idea was |
| to consider that at each interview the state was recorded
|
to consider that at each interview the state was recorded |
| (healthy, disable or death) and IMaCh was corrected; but when we
|
(healthy, disable or death) and IMaCh was corrected; but when we |
| introduced the exact date of death then we should have modified
|
introduced the exact date of death then we should have modified |
| the contribution of an exact death to the likelihood. This new
|
the contribution of an exact death to the likelihood. This new |
| contribution is smaller and very dependent of the step unit
|
contribution is smaller and very dependent of the step unit |
| stepm. It is no more the probability to die between last interview
|
stepm. It is no more the probability to die between last interview |
| and month of death but the probability to survive from last
|
and month of death but the probability to survive from last |
| interview up to one month before death multiplied by the
|
interview up to one month before death multiplied by the |
| probability to die within a month. Thanks to Chris
|
probability to die within a month. Thanks to Chris |
| Jackson for correcting this bug. Former versions increased
|
Jackson for correcting this bug. Former versions increased |
| mortality artificially. The bad side is that we add another loop
|
mortality artificially. The bad side is that we add another loop |
| which slows down the processing. The difference can be up to 10%
|
which slows down the processing. The difference can be up to 10% |
| lower mortality.
|
lower mortality. |
|
|
|
| 2002-05-30 <brouard@BROUARD>
|
2002-05-30 <brouard@BROUARD> |
| |
|
| * imach.c (Module): Add correlation matrix of one-step
|
* imach.c (Module): Add correlation matrix of one-step |
| probabilities and covariance matrix
|
probabilities and covariance matrix |
| |
|
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