Diff for /imach/src/ChangeLog between versions 1.42 and 1.66

version 1.42, 2021/02/12 11:33:48 version 1.66, 2023/05/08 18:48:01
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 2021-02-12  Nicolas Brouard   <brouard@ined.fr>  2023-05-08  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error          *  (Module): Error V0 when result:. and model 1+age+V1: fixed
   
   2023-04-29  Nicolas Brouard  <brouard@ined.fr>
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>  
           * imach.c (Module): Inverting the model equation and fixingg bugs
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.          in the drawings
           "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>  
   2023-04-24  Nicolas Brouard  <brouard@ined.fr>
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy  
         and life table from the data without any state)          * imach.c (Module): some bugs in printinggnuplot 
   
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
   
         * version.h: Summary: version 0.99.r19          * imach.c (Module): Version 0.99r42 needed a newer version of
           Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         * imach.c: Summary: Projection syntax simplified          version 5.0 or 5.1 distributed with IMaCh.
         We can now start projections, forward or backward, from the mean date  
         of inteviews up to or down to a number of years of projection:  2022-09-18  Nicolas Brouard   <brouard@ined.fr>
         prevforecast=1 yearsfproj=15.3 mobil_average=0  
         or          * imach.c (Module): Fixing when a state in the data is 0 or higher
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0          than lstate+ndeath. Fixing the plot of contribution to Likelihood.
         or  
         prevbackcast=1 yearsbproj=12.3 mobil_average=1  2022-09-16  Nicolas Brouard   <brouard@ined.fr>
         or  
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1          * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
   
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: doxygen tex bug          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
   
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: There was some wrong lines added          * imach.c (Module): Version 0.99r39 with colored dummy covariates
           (fixed or time varying), using new last columns of
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>          ILK_parameter.txt file.
   
         * Makefile, imach.c: *** empty log message ***  2022-09-11  Nicolas Brouard   <brouard@ined.fr>
   
         * ChangeLog: Summary: C=          * imach.c (Module): Adding timevarying products of any kinds,
           should work before shifting cotvar from ncovcol+nqv columns in
         * imach.c: Summary: Some updates          order to have a correspondance between the column of cotvar and
           the id of column.
         * imach.c: Summary: Before ncovmax          (Module): Some cleaning and adding covariates in ILK.txt
   
         * version.h: *** empty log message ***  2022-09-09  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: 0.99r18 unlimited number of individuals          * imach.c (Module): Many improvements for fixing products of fixed
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.          timevarying as well as fixed * fixed, and test with quantitative
           covariate.
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-04  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Bug for young ages (<-30) will be in r17  
           * imach.c (Module): Now the easy runs i.e. without result or
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>          model=1+age only did not work. The defautl combination should be 1
           and not 0 because everything hasn't been tranformed yet.
         * Makefile: Summary: 0.99r16  
   2022-09-02  Nicolas Brouard   <brouard@ined.fr>
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Version 0.99r35 because it outputs same results with
         * imach.c: Summary: Some bugs fixed          1+age+V1+V1*age for females and 1+age for females only
           (education=1 noweight)
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  
   2022-08-31  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17  
           * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  
   2022-08-21  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some bugs fixed  
           * imach.c (Module): Version 0.99r33 A lot of changes in
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>          reassigning covariates: my first idea was that people will always
           use the first covariate V1 into the model but in fact they are
         * imach.c:          producing data with many covariates and can use an equation model
         Summary: Bug fixed by providing frequencies only for non missing covariates          with some of the covariate; it means that in a model V2+V3 instead
           of codtabm(k,Tvaraff[j]) which calculates for combination k, for
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>          three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
           the equation model is restricted to two variables only (V2, V3)
         * imach.c: Summary: some minor bugs          and the combination for V2 should be codtabm(k,1) instead of
           (codtabm(k,2), and the code should be
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>          codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
           made. All of these should be simplified once a day like we did in
         * README.txt: *** empty log message ***          hpxij() for example by using precov[nres] which is computed in
           decoderesult for each nres of each resultline. Loop should be done
         * imach.c: Summary: Some bugs fixed, valgrind tested          on the equation model globally by distinguishing only product with
           age (which are changing with age) and no more on type of
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>          covariates, single dummies, single covariates. 
   
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  2022-08-06  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:          *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
         Summary: Computing mean and stdeviation of fixed quantitative variables  
   2022-08-03  Nicolas Brouard   <brouard@ined.fr>
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>  
           *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
         * imach.c: Summary: Some minor bugs fixed  
   2022-07-25  Brouard Nicolas  <brouard@brouard.name>
         * version.h: *** empty log message ***  
           * imach.c (Module): Error cptcovn instead of nsd in bmij (was
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>          coredumped, revealed by Feiuno, thank you.
   
         * imach.c: *** empty log message ***  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Adding second argument for quitting          * r29 W and not sqrt(Wald)
   
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  2022-07-22  Nicolas Brouard   <brouard@ined.fr>
   
         * Makefile, README.txt, imach.c: Summary: 0.99r15          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c  
   2022-06-02  Brouard Nicolas  <brouard@brouard.name>
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Adding the Wald tests from the log to the main
         * imach.c: Summary: temporary working          htm for better display of the maximum likelihood estimators.
   
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>  2022-05-30  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)          * imach.c: With products of covariates (age or dummies or
           quantitatives), estimates of parameters were good but when
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>          estimating variances the positions of newly created covariates
           were wrongly assigned and results were wrong. Thank to Feinua_Sun!
         * imach.c: Summary: BOM files can be read now  
   2022-05-24  Nicolas Brouard   <brouard@ined.fr>
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Some attempts to find a bug of wrong estimates
         * imach.c: Summary: Graphs improvements          of confidencce intervals with product in the equation modelC
   
         * imach.c: Summary: Saito's color  2022-05-15  Nicolas Brouard   <brouard@ined.fr>
   
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module):  Some minor improvements
   
         * imach.c: Summary: Version 0.99r14  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
   
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Adding link to text data files
   
         * imach.c: Summary: More documentation on projections  2022-04-11  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)          * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
   
         * imach.c: Summary: Some bug with rint  2022-04-05  Brouard Nicolas  <brouard@ined.fr>
   
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Fixed covariates (dummy or quantitative)
           with missing values have never been allowed but are ERRORS and
         * imach.c: *** empty log message ***          program quits. Standard deviations of fixed covariates were
           wrongly computed. Mean and standard deviations of time varying
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>          covariates are still not computed.
   
         * imach.c: Summary: Code into subroutine, cleanings  2022-03-17  Brouard Nicolas  <brouard@ined.fr>
   
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>          * 99r25 Improvements in fixing discrepancies between covariates
           missing in result line but in model. 
         * imach.c:  
         Summary: backprojection and confidence intervals of backprevalence  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: temporary save for backprojection  
           * ./ (Module): Fixed bug on result:
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)  
   *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Fix bug on quitting after result lines!
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          (Module): Version 0.99r21
   
         * imach.c: Summary: Labels in graphs  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
   
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
   
         * imach.c: Summary: to save  
   2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
         * imach.c: *** empty log message ***  
   2020-02-22  Brouard Nicolas  <brouard@ined.fr>
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Update mle=-3 (for computing Life expectancy
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1          and life table from the data without any state)
   
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>  2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Gnuplot indexations fixed (humm)          * version.h: Summary: version 0.99.r19
   
         * imach.c:          * imach.c: Summary: Projection syntax simplified
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3          We can now start projections, forward or backward, from the mean date
           of inteviews up to or down to a number of years of projection:
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>          prevforecast=1 yearsfproj=15.3 mobil_average=0
           or
         * imach.c: Summary: Version 0.99r12          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
         Some cleanings, conformed with updated documentation.          or
           prevbackcast=1 yearsbproj=12.3 mobil_average=1
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>          or
           prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
         * version.h: *** empty log message ***  
   2019-05-18  Brouard Nicolas  <brouard@ined.fr>
         * version.h: Summary:0.99r11  
           * imach.c: Summary: doxygen tex bug
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>  
   2019-05-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Temp  
           * imach.c: Summary: There was some wrong lines added
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>  
   2019-05-09  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Temporary  
           * Makefile, imach.c: *** empty log message ***
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>  
           * ChangeLog: Summary: C=
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed  
           * imach.c: Summary: Some updates
         * imach.c: Summary: Fixing data parameter line  
           * imach.c: Summary: Before ncovmax
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: *** empty log message ***
         * imach.c: Summary: 0.99 in progress  
           * imach.c: Summary: 0.99r18 unlimited number of individuals
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>          The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   
         * imach.c: *** empty log message ***  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * imach.c: Summary: Bug for young ages (<-30) will be in r17
   
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>  2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: continue          * Makefile: Summary: 0.99r16
   
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Starting values from frequencies          * imach.c: Summary: Some bugs fixed
   
         * imach.c: *** empty log message ***  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>          * imach.c:  Summary: Bug for young ages (<-30) will be in r17
   
         * imach.c: *** empty log message ***  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bugs fixed
   
         * imach.c: Summary: Fixing a lots  2018-05-01  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>          * imach.c:
           Summary: Bug fixed by providing frequencies only for non missing covariates
         * imach.c: Summary: gnuplot problem in Back projection to fix  
   2018-04-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Better  
           * imach.c: Summary: some minor bugs
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>  
   2018-04-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: Improvement in Powell output in order to copy and paste          * README.txt: *** empty log message ***
   
         * imach.c: Summary: Starting tests of 0.99          * imach.c: Summary: Some bugs fixed, valgrind tested
   
         * imach.c: Summary: to valgrind  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
         * imach.c: *** empty log message ***          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Some minor bugs fixed
         * imach.c: Summary: not working  
           * version.h: *** empty log message ***
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>  
   2018-02-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: not working  
           * imach.c: *** empty log message ***
         * imach.c: Summary: Not working  
           * imach.c: Summary: Adding second argument for quitting
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Completing for func too  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
         * imach.c: Summary: Fixing some arrays, still debugging  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: temporary working
   
         * imach.c:  2017-07-19  Brouard Nicolas  <brouard@ined.fr>
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  
           * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>  
   2017-07-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temp  
           * imach.c: Summary: BOM files can be read now
         * imach.c: Summary: saving but not running  
   2017-06-30  Brouard Nicolas  <brouard@ined.fr>
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Graphs improvements
         * imach.c: Summary: Fixes  
           * imach.c: Summary: Saito's color
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  
   2017-06-29  Brouard Nicolas  <brouard@ined.fr>
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  
           * imach.c: Summary: Version 0.99r14
         * setup.iss, Makefile, version.h: *** empty log message ***  
   2017-06-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary  
           * imach.c: Summary: More documentation on projections
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
           * imach.c: Summary: Some bug with rint
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  
   2017-05-24  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: minor bug  
           * imach.c: *** empty log message ***
         * imach.c: Summary: 0.99r2  
   2017-05-23  Brouard Nicolas  <brouard@ined.fr>
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Code into subroutine, cleanings
         * imach.c: *** empty log message ***  
   2017-05-18  Brouard Nicolas  <brouard@ined.fr>
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: Summary: 0.99 Back projections          Summary: backprojection and confidence intervals of backprevalence
   
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>  2017-05-13  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Experimental backcast          * imach.c: Summary: temporary save for backprojection
   
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
   
         * imach.c: Summary: 0.98r4 Warning and status=-2  2017-04-26  Brouard Nicolas  <brouard@ined.fr>
   
         Version 0.98r4 is now:          * imach.c: Summary: imach 0.99r13 Some bugs fixed
          - displaying an error when status is -1, date of interview unknown and date of death known;  
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.          * imach.c: Summary: Labels in graphs
         Older changes concerning s=-2, dating from 2005 have been supersed.  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: to save
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: *** empty log message ***
         * imach.c: Summary: 0.98r4 working  
   2017-04-05  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: Summary: linuxrpm added  
           * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
         * Makefile: *** empty log message ***  
   2017-04-04  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary not working  
           * imach.c: Summary: Gnuplot indexations fixed (humm)
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: Summary: 0.98r4          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
   
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Version 0.99r12
           Some cleanings, conformed with updated documentation.
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>  
   2017-03-30  Brouard Nicolas  <brouard@ined.fr>
         * Makefile:  
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more          * version.h: *** empty log message ***
   
         * imach.c: Summary: minor typo          * version.h: Summary:0.99r11
   
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
   
         Author: Nicolas Brouard          * imach.c: Summary: Temp
   
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  2017-03-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Start working on projected prevalences          * imach.c: Summary: Temporary
   
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>  2017-03-08  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Adding ftolpl parameter          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
         Author: N Brouard  
           * imach.c: Summary: Fixing data parameter line
         We had difficulties to get smoothed confidence intervals. It was due  
         to the period prevalence which wasn't computed accurately. The inner  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
         parameter ftolpl is now an outer parameter of the .imach parameter  
         file after estepm. If ftolpl is small 1.e-4 and estepm too,          * imach.c: Summary: 0.99 in progress
         computation are long.  
   2016-09-15  Brouard Nicolas  <brouard@ined.fr>
         * version.h: *** empty log message ***  
           * imach.c: *** empty log message ***
         * imach.c: Summary: temporary  
           * imach.c: Summary: not working
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>  
   2016-09-08  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: continue
         * setup.iss.in: Summary: some new subdirs  
   2016-09-07  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Starting values from frequencies
         * setup.iss.in:  
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts          * imach.c: *** empty log message ***
   
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: *** empty log message ***
   
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>  2016-08-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: Summary: Fixing a lots
         Summary: 0.98r3 some clarification for graphs on likelihood contributions  
   2016-08-29  Brouard Nicolas  <brouard@ined.fr>
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: gnuplot problem in Back projection to fix
         * imach.c: Summary: Some new graphs of contribution to likelihood  
           * imach.c: Summary: Better
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>  
   2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake          * imach.c:
           Summary: Improvement in Powell output in order to copy and paste
         * imach.c: Summary: looking at better estimation of the hessian  
           * imach.c: Summary: Starting tests of 0.99
         Also a better criteria for convergence to the period prevalence And  
         therefore adding the number of years needed to converge. (The          * imach.c: Summary: to valgrind
         prevalence in any alive state shold sum to one  
   2016-08-25  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: *** empty log message ***
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>  
   2016-08-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c:  
         Summary: Adding some overall graph on contribution to likelihood. Might change          * imach.c: *** empty log message ***
   
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: not working
   
         * Makefile: *** empty log message ***  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r0          * imach.c: Summary: not working
   
         - Some new graphs like suvival functions          * imach.c: Summary: Not working
         - Some bugs fixed like model=1+age+V2.  
   2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         * ChangeLog, Makefile: Summary: 0.98r0  
           * imach.c: Summary: Completing for func too
         * CMakeLists.txt: Summary: Some tests for setup.iss  
   2016-07-22  Brouard Nicolas  <brouard@ined.fr>
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
           * imach.c: Summary: Fixing some arrays, still debugging
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  
   2016-07-21  Brouard Nicolas  <brouard@ined.fr>
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  
           * imach.c:
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
   
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)          * imach.c: Summary: temp
   
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>          * imach.c: Summary: saving but not running
   
         * imach.c (Module): Merging 1.61 to 1.162  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
   
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>          * imach.c: Summary: Fixes
   
         * prevlim.h (Module):  2016-02-19  Brouard Nicolas  <brouard@ined.fr>
   
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>          * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
   
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...          * setup.iss, Makefile, version.h: *** empty log message ***
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
           * imach.c: Summary: temporary
 2010-04-29  brouard  <brouard@ined.fr>  
   2016-02-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.          * imach.c: Summary: Probably last 0.98 stable version 0.98r6
   
 2010-04-26  brouard  <brouard@ined.fr>  2016-02-16  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): merging some libgsl code. Fixing computation          * imach.c: Summary: minor bug
         of likelione (using inter/intrapolation if mle = 0) in order to  
         get same likelihood as if mle=1.          * imach.c: Summary: 0.99r2
         Some cleaning of code and comments added.  
   2016-02-15  Brouard Nicolas  <brouard@ined.fr>
 2009-10-29  brouard  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  
   2016-02-12  Brouard Nicolas  <brouard@ined.fr>
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.99 Back projections
         * imach.c (Module): Clarifications on computing e.j  
   2015-12-23  Brouard Nicolas  <brouard@ined.fr>
 2006-04-28  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: Experimental backcast
         * imach.c (Module): Yes the sum of survivors was wrong since  
         imach-114 because nhstepm was no more computed in the age  2015-12-18  Brouard Nicolas  <brouard@ined.fr>
         loop. Now we define nhstepma in the age loop.  
         (Module): In order to speed up (in case of numerous covariates) we          * imach.c: Summary: 0.98r4 Warning and status=-2
         compute health expectancies (without variances) in a first step  
         and then all the health expectancies with variances or standard          Version 0.98r4 is now:
         deviation (needs data from the Hessian matrices) which slows the           - displaying an error when status is -1, date of interview unknown and date of death known;
         computation.           - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         In the future we should be able to stop the program is only health          Older changes concerning s=-2, dating from 2005 have been supersed.
         expectancies and graph are needed without standard deviations.  
           * Makefile: *** empty log message ***
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
   2015-12-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.iss (Module):  
           * Makefile: *** empty log message ***
         * imach.c (Module): bugs in evsi + population file added in htm output file  
           * imach.c: Summary: 0.98r4 working
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * Makefile: Summary: linuxrpm added
         * imach.c (Module):  
           * Makefile: *** empty log message ***
 2006-03-20  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: temporary not working
         * imach.c (Module): <title> changed, corresponds to .htm file  
         name. <head> headers where missing.  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): 0.98g          * imach.c: Summary: 0.98r4
   
         * imach.c (Module): Weights can have a decimal point as for  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
         English (a comma might work with a correct LC_NUMERIC environment,  
         otherwise the weight is truncated).          * Makefile: *** empty log message ***
         Modification of warning when the covariates values are not 0 or  
         1.  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
         Version 0.98g  
           * Makefile:
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
   
         * imach.c (Module): Comments concerning covariates added          * imach.c: Summary: minor typo
   
         * noreg-setup.iss (Module): Version 0.98f          * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
   
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup          Author: Nicolas Brouard
   
         * imach.c (Module): refinements in the computation of lli if  2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         status=-2 in order to have more reliable computation if stepm is  
         not 1 month. Version 0.98f          * imach.c: Summary: Start working on projected prevalences
   
 2006-03-15  Brouard Nicolas  <brouard@localhost>  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Bug if status = -2, the loglikelihood was          * imach.c: Summary: Adding ftolpl parameter
         computed as likelihood omitting the logarithm. Version O.98e          Author: N Brouard
   
 2006-03-14  Brouard Nicolas  <brouard@localhost>          We had difficulties to get smoothed confidence intervals. It was due
           to the period prevalence which wasn't computed accurately. The inner
         * imach.c (Module): varevsij Comments added explaining the second          parameter ftolpl is now an outer parameter of the .imach parameter
         table of variances if popbased=1 .          file after estepm. If ftolpl is small 1.e-4 and estepm too,
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.          computation are long.
         (Module): Function pstamp added  
         (Module): Version 0.98d          * version.h: *** empty log message ***
   
 2006-03-06  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: temporary
   
         * imach.c (Module): Variance-covariance wrong links and  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
         varian-covariance of ej. is needed (Saito).  
           * Makefile: *** empty log message ***
 2006-02-27  Brouard Nicolas  <brouard@localhost>  
           * setup.iss.in: Summary: some new subdirs
         * imach.c (Module): One freematrix added in mlikeli!  
           * imach.c: *** empty log message ***
 2006-02-26  Brouard Nicolas  <brouard@localhost>  
           * setup.iss.in:
         * imach.c (Module): Some improvements in processing parameter          Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         filename with strsep.  
   2015-10-24  Brouard Nicolas  <brouard@ined.fr>
 2006-02-24  Brouard Nicolas  <brouard@localhost>  
           * imach.c: *** empty log message ***
         * imach.c (Module): Memory leaks checks with valgrind and:  
         datafile was not closed, some imatrix were not freed and on matrix  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
         allocation too.  
           * imach.c:
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          Summary: 0.98r3 some clarification for graphs on likelihood contributions
   
         * strsep.c (Module): Inclusion because not in mingw32!!!  2015-10-01  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in (Module): IMACHSETUPVERSION added          * imach.c: Summary: Some new graphs of contribution to likelihood
   
         * noreg-setup.iss (Module): added to cvs tree  2015-09-30  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): IMACHSETUPVERSION added          * Makefile:
           Summary: Version read from version.h, itself read with cmake
 2006-01-30  BROUARD Nicolas  <brouard@localhost>  
           * imach.c: Summary: looking at better estimation of the hessian
         * Makefile (Module, Module): Latest Makefile  
           Also a better criteria for convergence to the period prevalence And
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe          therefore adding the number of years needed to converge. (The
           prevalence in any alive state shold sum to one
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  
           * Makefile: *** empty log message ***
         * noreg-setup.iss (Module): ADDED  
   2015-09-22  Brouard Nicolas  <brouard@ined.fr>
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  
           * imach.c:
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          Summary: Adding some overall graph on contribution to likelihood. Might change
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  2015-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          * Makefile: *** empty log message ***
   
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X          * imach.c: Summary: 0.98r0
   
 2005-09-30    <lievre@PC_00595>          - Some new graphs like survival functions
           - Some bugs fixed like model=1+age+V2.
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  
         (Module): If the status is missing at the last wave but we know          * ChangeLog, Makefile: Summary: 0.98r0
         that the person is alive, then we can code his/her status as -2  
         (instead of missing=-1 in earlier versions) and his/her          * CMakeLists.txt: Summary: Some tests for setup.iss
         contributions to the likelihood is 1 - Prob of dying from last  
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         the healthy state at last known wave). Version is 0.98  
           *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
 2004-05-20  Brouard Nicolas  <brouard@localhost>  
   2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
         * imach.c (Repository):  
         Agnes added a direct estimation of mortality (without the need of          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
         computing period prevalence and differential mortality). Thus here  
         is version 0.97a which has been distributed to some people at  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  
         mortality using covariates is not done today. Estimating direct          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
         mortality is a very different process because it doesn't need  
         interpolation because it is easy to get the lx from the force of  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
         the mortality mux in the simplest case as for a Gompertz (log mux  
         = a + b*x . But we have been able to incorporate the new code          * imach.c (Module): Merging 1.61 to 1.162
         within former imach program (0.96d) without deteriorating too much  
         the understanding of the program.  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
   
 2003-06-25    <brouard@BROUARD>          * prevlim.h (Module): 
   
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
         exist so I changed back to asctime which exists.  
         (Module): Version 0.96b          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
           (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
 2003-06-24    <brouard@BROUARD>  
   2010-04-29  brouard  <brouard@ined.fr>
         * imach.c (Module): Some bugs corrected for windows. Also, when  
         mle=-1 a template is output in file "or"mypar.txt with the design          * imach.c (Module): Checking covariates for more complex models
         of the covariance matrix to be input.          than V1+V2. A lot of change to be done. Unstable.
   
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  2010-04-26  brouard  <brouard@ined.fr>
   
         * imach.c (Repository): Duplicated warning errors corrected.          * imach.c (Module): merging some libgsl code. Fixing computation
         (Repository): Elapsed time after each iteration is now output. It          of likelione (using inter/intrapolation if mle = 0) in order to
         helps to forecast when convergence will be reached. Elapsed time          get same likelihood as if mle=1.
         is stamped in powell.  We created a new html file for the graphs          Some cleaning of code and comments added.
         concerning matrix of covariance. It has extension -cov.htm.  
   2009-10-29  brouard  <brouard@ined.fr>
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  
   2006-06-30  Brouard Nicolas  <brouard@localhost>
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): Clarifications on computing e.j
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  
   2006-04-28  Brouard Nicolas  <brouard@localhost>
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): Yes the sum of survivors was wrong since
           imach-114 because nhstepm was no more computed in the age
         * imach.c (Repository): Check when date of death was earlier that          loop. Now we define nhstepma in the age loop.
         current date of interview. It may happen when the death was just          (Module): In order to speed up (in case of numerous covariates) we
         prior to the death. In this case, dh was negative and likelihood          compute health expectancies (without variances) in a first step
         was wrong (infinity). We still send an "Error" but patch by          and then all the health expectancies with variances or standard
         assuming that the date of death was just one stepm after the          deviation (needs data from the Hessian matrices) which slows the
         interview.          computation.
         (Repository): Because some people have very long ID (first column)          In the future we should be able to stop the program is only health
         we changed int to long in num[] and we added a new lvector for          expectancies and graph are needed without standard deviations.
         memory allocation. But we also truncated to 8 characters (left  
         truncation)  2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
         (Repository): No more line truncation errors.          * imach.iss (Module): 
   
 2003-06-14  Brouard Nicolas  <brouard@homebrou>          * imach.c (Module): bugs in evsi + population file added in htm output file
   
         * imach.c (Repository): Add of a routine likelione (likelihood  2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         only once) which prints on a text file  
         (ilk) the contributions to the likelihood for each          * imach.c (Module): 
         individual/wave.  
   2006-03-20  Brouard Nicolas  <brouard@localhost>
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  
         * imach.c (Repository): Replace "freqsummary" at a correct          * imach.c (Module): <title> changed, corresponds to .htm file
         place. It differs from routine "prevalence" which may be called          name. <head> headers where missing.
         many times. Probs is memory consuming and must be used with  
         parcimony.          * Makefile (Module): 0.98g
   
 2003-06-17    <brouard@BROUARD>          * imach.c (Module): Weights can have a decimal point as for
           English (a comma might work with a correct LC_NUMERIC environment,
         * timeval.h (Module): Added included file to make use of          otherwise the weight is truncated).
         gettimeofday working on win32 with cygwin.          Modification of warning when the covariates values are not 0 or
           1. 
 2003-05-16  Brouard Nicolas  <brouard@brouard>          Version 0.98g
         * imach.c (Module): Insert of a warning if the delay between two  
         waves is negative.  2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
         * imach.c (Module):          * imach.c (Module): Comments concerning covariates added
   
 2003-05-03    <brouard@BROUARD>          * noreg-setup.iss (Module): Version 0.98f
   
         * imach.c: Some cleaning          * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
   
 2003-03-28    <brouard@BROUARD>          * imach.c (Module): refinements in the computation of lli if
         * imach.c (Module): In version up to 0.92 likelihood was computed          status=-2 in order to have more reliable computation if stepm is
         as if date of death was unknown. Death was treated as any other          not 1 month. Version 0.98f
         health state: the date of the interview describes the actual state  
         and not the date of a change in health state. The former idea was  2006-03-15  Brouard Nicolas  <brouard@localhost>
         to consider that at each interview the state was recorded  
         (healthy, disable or death) and IMaCh was corrected; but when we          * imach.c (Module): Bug if status = -2, the loglikelihood was
         introduced the exact date of death then we should have modified          computed as likelihood omitting the logarithm. Version O.98e
         the contribution of an exact death to the likelihood. This new  
         contribution is smaller and very dependent of the step unit  2006-03-14  Brouard Nicolas  <brouard@localhost>
         stepm. It is no more the probability to die between last interview  
         and month of death but the probability to survive from last          * imach.c (Module): varevsij Comments added explaining the second
         interview up to one month before death multiplied by the          table of variances if popbased=1 .
         probability to die within a month. Thanks to Chris          (Module): Covariances of eij, ekl added, graphs fixed, new html link.
         Jackson for correcting this bug.  Former versions increased          (Module): Function pstamp added
         mortality artificially. The bad side is that we add another loop          (Module): Version 0.98d 
   
   2006-03-06  Brouard Nicolas  <brouard@localhost>
         which slows down the processing. The difference can be up to 10%  
           * imach.c (Module): Variance-covariance wrong links and
           varian-covariance of ej. is needed (Saito).
         lower mortality.  
   2006-02-27  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): One freematrix added in mlikeli!
   
   2006-02-26  Brouard Nicolas  <brouard@localhost>
 2002-05-30    <brouard@BROUARD>  
           * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
   
   2006-02-24  Brouard Nicolas  <brouard@localhost>
   
         *          * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
   
   2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
         * imach.c (Module): Add correlation matrix of one-step          * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
         probabilities and covariance matrix  
           * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

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  Added in v.1.66


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