Diff for /imach/src/ChangeLog between versions 1.49 and 1.66

version 1.49, 2022/04/11 16:17:28 version 1.66, 2023/05/08 18:48:01
Line 1 Line 1
 2022-04-11  Nicolas Brouard   <brouard@ined.fr>  2023-05-08  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed          *  (Module): Error V0 when result:. and model 1+age+V1: fixed
   
 2022-04-05  Brouard Nicolas  <brouard@ined.fr>  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
   
         * imach.c (Module): Fixed covariates (dummy or quantitative)          * imach.c (Module): Inverting the model equation and fixingg bugs
         with missing values have never been allowed but are ERRORS and          in the drawings
         program quits. Standard deviations of fixed covariates were          "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
         wrongly computed. Mean and standard deviations of time varying  
         covariates are still not computed.  2023-04-24  Nicolas Brouard  <brouard@ined.fr>
   
 2022-03-17  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): some bugs in printinggnuplot 
   
         * 99r25 Improvements in fixing discrepancies between covariates  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
         missing in result line but in model.  
           * imach.c (Module): Version 0.99r42 needed a newer version of
 *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>          Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett          version 5.0 or 5.1 distributed with IMaCh.
   
 *2021-03-08  Nicolas Brouard   <brouard@ined.fr>  2022-09-18  Nicolas Brouard   <brouard@ined.fr>
   
         * ./ (Module): Fixed bug on result:          * imach.c (Module): Fixing when a state in the data is 0 or higher
           than lstate+ndeath. Fixing the plot of contribution to Likelihood.
 *2021-02-20  Nicolas Brouard   <brouard@ined.fr>  
   2022-09-16  Nicolas Brouard   <brouard@ined.fr>
         * imach.c (Module): Fix bug on quitting after result lines!  
         (Module): Version 0.99r21          * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
   
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
   
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>  
           * imach.c (Module): Version 0.99r39 with colored dummy covariates
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.          (fixed or time varying), using new last columns of
           ILK_parameter.txt file.
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-11  Nicolas Brouard   <brouard@ined.fr>
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy  
         and life table from the data without any state)          * imach.c (Module): Adding timevarying products of any kinds,
           should work before shifting cotvar from ncovcol+nqv columns in
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>          order to have a correspondance between the column of cotvar and
           the id of column.
         * version.h: Summary: version 0.99.r19          (Module): Some cleaning and adding covariates in ILK.txt
   
         * imach.c: Summary: Projection syntax simplified  2022-09-09  Nicolas Brouard   <brouard@ined.fr>
         We can now start projections, forward or backward, from the mean date  
         of inteviews up to or down to a number of years of projection:          * imach.c (Module): Many improvements for fixing products of fixed
         prevforecast=1 yearsfproj=15.3 mobil_average=0          timevarying as well as fixed * fixed, and test with quantitative
         or          covariate.
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0  
         or  2022-09-04  Nicolas Brouard   <brouard@ined.fr>
         prevbackcast=1 yearsbproj=12.3 mobil_average=1  
         or          * imach.c (Module): Now the easy runs i.e. without result or
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1          model=1+age only did not work. The defautl combination should be 1
           and not 0 because everything hasn't been tranformed yet.
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>  
   2022-09-02  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: doxygen tex bug  
           * imach.c: Version 0.99r35 because it outputs same results with
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>          1+age+V1+V1*age for females and 1+age for females only
           (education=1 noweight)
         * imach.c: Summary: There was some wrong lines added  
   2022-08-31  Nicolas Brouard   <brouard@ined.fr>
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
         * Makefile, imach.c: *** empty log message ***  
   2022-08-21  Nicolas Brouard   <brouard@ined.fr>
         * ChangeLog: Summary: C=  
           * imach.c (Module): Version 0.99r33 A lot of changes in
         * imach.c: Summary: Some updates          reassigning covariates: my first idea was that people will always
           use the first covariate V1 into the model but in fact they are
         * imach.c: Summary: Before ncovmax          producing data with many covariates and can use an equation model
           with some of the covariate; it means that in a model V2+V3 instead
         * version.h: *** empty log message ***          of codtabm(k,Tvaraff[j]) which calculates for combination k, for
           three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         * imach.c: Summary: 0.99r18 unlimited number of individuals          the equation model is restricted to two variables only (V2, V3)
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.          and the combination for V2 should be codtabm(k,1) instead of
           (codtabm(k,2), and the code should be
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>          codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
           made. All of these should be simplified once a day like we did in
         * imach.c: Summary: Bug for young ages (<-30) will be in r17          hpxij() for example by using precov[nres] which is computed in
           decoderesult for each nres of each resultline. Loop should be done
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>          on the equation model globally by distinguishing only product with
           age (which are changing with age) and no more on type of
         * Makefile: Summary: 0.99r16          covariates, single dummies, single covariates. 
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2022-08-06  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed          *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2022-08-03  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17          *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2022-07-25  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: Some bugs fixed          * imach.c (Module): Error cptcovn instead of nsd in bmij (was
           coredumped, revealed by Feiuno, thank you.
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>  
   2022-07-23  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  
         Summary: Bug fixed by providing frequencies only for non missing covariates          * r29 W and not sqrt(Wald)
   
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>  2022-07-22  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: some minor bugs          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
   
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>  2022-06-02  Brouard Nicolas  <brouard@brouard.name>
   
         * README.txt: *** empty log message ***          * imach.c (Module): Adding the Wald tests from the log to the main
           htm for better display of the maximum likelihood estimators.
         * imach.c: Summary: Some bugs fixed, valgrind tested  
   2022-05-30  Brouard Nicolas  <brouard@brouard.name>
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: With products of covariates (age or dummies or
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16          quantitatives), estimates of parameters were good but when
           estimating variances the positions of newly created covariates
         * imach.c:          were wrongly assigned and results were wrong. Thank to Feinua_Sun!
         Summary: Computing mean and stdeviation of fixed quantitative variables  
   2022-05-24  Nicolas Brouard   <brouard@ined.fr>
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Some attempts to find a bug of wrong estimates
         * imach.c: Summary: Some minor bugs fixed          of confidencce intervals with product in the equation modelC
   
         * version.h: *** empty log message ***  2022-05-15  Nicolas Brouard   <brouard@ined.fr>
   
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module):  Some minor improvements
   
         * imach.c: *** empty log message ***  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: Adding second argument for quitting          * imach.c (Module): Adding link to text data files
   
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  2022-04-11  Nicolas Brouard   <brouard@ined.fr>
   
         * Makefile, README.txt, imach.c: Summary: 0.99r15          * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c  
   2022-04-05  Brouard Nicolas  <brouard@ined.fr>
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Fixed covariates (dummy or quantitative)
         * imach.c: Summary: temporary working          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)  
   2022-03-17  Brouard Nicolas  <brouard@ined.fr>
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>  
           * 99r25 Improvements in fixing discrepancies between covariates
         * imach.c: Summary: BOM files can be read now          missing in result line but in model. 
   
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
         * imach.c: Summary: Graphs improvements  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Saito's color  
           * ./ (Module): Fixed bug on result:
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>  
   *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Version 0.99r14  
           * imach.c (Module): Fix bug on quitting after result lines!
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>          (Module): Version 0.99r21
   
         * imach.c: Summary: More documentation on projections  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
   
         * imach.c: Summary: Some bug with rint  
   2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
         * imach.c: *** empty log message ***  
   2020-02-22  Brouard Nicolas  <brouard@ined.fr>
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Update mle=-3 (for computing Life expectancy
         * imach.c: Summary: Code into subroutine, cleanings          and life table from the data without any state)
   
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>  2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * version.h: Summary: version 0.99.r19
         Summary: backprojection and confidence intervals of backprevalence  
           * imach.c: Summary: Projection syntax simplified
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>          We can now start projections, forward or backward, from the mean date
           of inteviews up to or down to a number of years of projection:
         * imach.c: Summary: temporary save for backprojection          prevforecast=1 yearsfproj=15.3 mobil_average=0
           or
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
           or
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   
         * imach.c: Summary: Labels in graphs  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: doxygen tex bug
   
         * imach.c: Summary: to save  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: There was some wrong lines added
   
         * imach.c: *** empty log message ***  2019-05-09  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>          * Makefile, imach.c: *** empty log message ***
   
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1          * ChangeLog: Summary: C=
   
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some updates
   
         * imach.c: Summary: Gnuplot indexations fixed (humm)          * imach.c: Summary: Before ncovmax
   
         * imach.c:          * version.h: *** empty log message ***
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  
           * imach.c: Summary: 0.99r18 unlimited number of individuals
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>          The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   
         * imach.c: Summary: Version 0.99r12  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
         Some cleanings, conformed with updated documentation.  
           * imach.c: Summary: Bug for young ages (<-30) will be in r17
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>  
   2018-12-05  Brouard Nicolas  <brouard@ined.fr>
         * version.h: *** empty log message ***  
           * Makefile: Summary: 0.99r16
         * version.h: Summary:0.99r11  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some bugs fixed
         * imach.c: Summary: Temp  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:  Summary: Bug for young ages (<-30) will be in r17
         * imach.c: Summary: Temporary  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some bugs fixed
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed  
   2018-05-01  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixing data parameter line  
           * imach.c:
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>          Summary: Bug fixed by providing frequencies only for non missing covariates
   
         * imach.c: Summary: 0.99 in progress  2018-04-27  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: some minor bugs
   
         * imach.c: *** empty log message ***  2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: not working          * README.txt: *** empty log message ***
   
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bugs fixed, valgrind tested
   
         * imach.c: Summary: continue  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
         * imach.c: Summary: Starting values from frequencies          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
         * imach.c: *** empty log message ***  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some minor bugs fixed
         * imach.c: *** empty log message ***  
           * version.h: *** empty log message ***
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>  
   2018-02-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixing a lots  
           * imach.c: *** empty log message ***
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Adding second argument for quitting
         * imach.c: Summary: gnuplot problem in Back projection to fix  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Better  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
         * imach.c:  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
         Summary: Improvement in Powell output in order to copy and paste  
           * imach.c: Summary: temporary working
         * imach.c: Summary: Starting tests of 0.99  
   2017-07-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: to valgrind  
           * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>  
   2017-07-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: BOM files can be read now
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>  
   2017-06-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Graphs improvements
         * imach.c: Summary: not working  
           * imach.c: Summary: Saito's color
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>  
   2017-06-29  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: not working  
           * imach.c: Summary: Version 0.99r14
         * imach.c: Summary: Not working  
   2017-06-27  Brouard Nicolas  <brouard@ined.fr>
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: More documentation on projections
         * imach.c: Summary: Completing for func too  
           * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some bug with rint
         * imach.c: Summary: Fixing some arrays, still debugging  
   2017-05-24  Brouard Nicolas  <brouard@ined.fr>
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c:  
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  2017-05-23  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Code into subroutine, cleanings
   
         * imach.c: Summary: temp  2017-05-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: saving but not running          * imach.c:
           Summary: backprojection and confidence intervals of backprevalence
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  
   2017-05-13  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Fixes  
           * imach.c: Summary: temporary save for backprojection
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  
   2017-04-26  Brouard Nicolas  <brouard@ined.fr>
         * setup.iss, Makefile, version.h: *** empty log message ***  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
         * imach.c: Summary: temporary  
           * imach.c: Summary: Labels in graphs
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
           * imach.c: Summary: to save
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: minor bug  
           * imach.c: *** empty log message ***
         * imach.c: Summary: 0.99r2  
   2017-04-05  Brouard Nicolas  <brouard@ined.fr>
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
         * imach.c: *** empty log message ***  
   2017-04-04  Brouard Nicolas  <brouard@ined.fr>
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Gnuplot indexations fixed (humm)
         * imach.c: Summary: 0.99 Back projections  
           * imach.c:
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
   
         * imach.c: Summary: Experimental backcast  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Version 0.99r12
           Some cleanings, conformed with updated documentation.
         * imach.c: Summary: 0.98r4 Warning and status=-2  
   2017-03-30  Brouard Nicolas  <brouard@ined.fr>
         Version 0.98r4 is now:  
          - displaying an error when status is -1, date of interview unknown and date of death known;          * version.h: *** empty log message ***
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.          * version.h: Summary:0.99r11
   
         * Makefile: *** empty log message ***  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Temp
   
         * Makefile: *** empty log message ***  2017-03-27  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4 working          * imach.c: Summary: Temporary
   
         * Makefile: Summary: linuxrpm added  2017-03-08  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
   
         * imach.c: Summary: temporary not working          * imach.c: Summary: Fixing data parameter line
   
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4          * imach.c: Summary: 0.99 in progress
   
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: *** empty log message ***
   
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: not working
   
         * Makefile:  2016-09-08  Brouard Nicolas  <brouard@ined.fr>
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  
           * imach.c: Summary: continue
         * imach.c: Summary: minor typo  
   2016-09-07  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
           * imach.c: Summary: Starting values from frequencies
         Author: Nicolas Brouard  
           * imach.c: *** empty log message ***
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  
   2016-09-02  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Start working on projected prevalences  
           * imach.c: *** empty log message ***
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>  
   2016-08-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Adding ftolpl parameter  
         Author: N Brouard          * imach.c: Summary: Fixing a lots
   
         We had difficulties to get smoothed confidence intervals. It was due  2016-08-29  Brouard Nicolas  <brouard@ined.fr>
         to the period prevalence which wasn't computed accurately. The inner  
         parameter ftolpl is now an outer parameter of the .imach parameter          * imach.c: Summary: gnuplot problem in Back projection to fix
         file after estepm. If ftolpl is small 1.e-4 and estepm too,  
         computation are long.          * imach.c: Summary: Better
   
         * version.h: *** empty log message ***  2016-08-26  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temporary          * imach.c:
           Summary: Improvement in Powell output in order to copy and paste
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Starting tests of 0.99
         * Makefile: *** empty log message ***  
           * imach.c: Summary: to valgrind
         * setup.iss.in: Summary: some new subdirs  
   2016-08-25  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: *** empty log message ***
         * setup.iss.in:  
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  2016-08-23  Brouard Nicolas  <brouard@ined.fr>
   
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c: *** empty log message ***
   
         * imach.c: *** empty log message ***          * imach.c: Summary: not working
   
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: Summary: not working
         Summary: 0.98r3 some clarification for graphs on likelihood contributions  
           * imach.c: Summary: Not working
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>  
   2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Some new graphs of contribution to likelihood  
           * imach.c: Summary: Completing for func too
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>  
   2016-07-22  Brouard Nicolas  <brouard@ined.fr>
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake          * imach.c: Summary: Fixing some arrays, still debugging
   
         * imach.c: Summary: looking at better estimation of the hessian  2016-07-21  Brouard Nicolas  <brouard@ined.fr>
   
         Also a better criteria for convergence to the period prevalence And          * imach.c:
         therefore adding the number of years needed to converge. (The          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
         prevalence in any alive state shold sum to one  
   2016-07-12  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: Summary: temp
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: saving but not running
         * imach.c:  
         Summary: Adding some overall graph on contribution to likelihood. Might change  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
   
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Fixes
   
         * Makefile: *** empty log message ***  2016-02-19  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r0          * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
   
         - Some new graphs like survival functions          * setup.iss, Makefile, version.h: *** empty log message ***
         - Some bugs fixed like model=1+age+V2.  
           * imach.c: Summary: temporary
         * ChangeLog, Makefile: Summary: 0.98r0  
   2016-02-17  Brouard Nicolas  <brouard@ined.fr>
         * CMakeLists.txt: Summary: Some tests for setup.iss  
           * imach.c: Summary: Probably last 0.98 stable version 0.98r6
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
   2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  
           * imach.c: Summary: minor bug
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  
           * imach.c: Summary: 0.99r2
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.  
   2016-02-15  Brouard Nicolas  <brouard@ined.fr>
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
           * imach.c: *** empty log message ***
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  
   2016-02-12  Brouard Nicolas  <brouard@ined.fr>
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>  
           * imach.c: Summary: 0.99 Back projections
         * imach.c (Module): Merging 1.61 to 1.162  
   2015-12-23  Brouard Nicolas  <brouard@ined.fr>
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  
           * imach.c: Summary: Experimental backcast
         * prevlim.h (Module):  
   2015-12-18  Brouard Nicolas  <brouard@ined.fr>
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>  
           * imach.c: Summary: 0.98r4 Warning and status=-2
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...  
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.          Version 0.98r4 is now:
            - displaying an error when status is -1, date of interview unknown and date of death known;
 2010-04-29  brouard  <brouard@ined.fr>           - permitting a status -2 when the vital status is unknown at a known date of right truncation.
           Older changes concerning s=-2, dating from 2005 have been supersed.
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.          * Makefile: *** empty log message ***
   
 2010-04-26  brouard  <brouard@ined.fr>  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): merging some libgsl code. Fixing computation          * Makefile: *** empty log message ***
         of likelione (using inter/intrapolation if mle = 0) in order to  
         get same likelihood as if mle=1.          * imach.c: Summary: 0.98r4 working
         Some cleaning of code and comments added.  
           * Makefile: Summary: linuxrpm added
 2009-10-29  brouard  <brouard@ined.fr>  
           * Makefile: *** empty log message ***
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  
           * imach.c: Summary: temporary not working
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
   2015-12-11  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Clarifications on computing e.j  
           * imach.c: Summary: 0.98r4
 2006-04-28  Brouard Nicolas  <brouard@localhost>  
   2015-12-08  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Yes the sum of survivors was wrong since  
         imach-114 because nhstepm was no more computed in the age          * Makefile: *** empty log message ***
         loop. Now we define nhstepma in the age loop.  
         (Module): In order to speed up (in case of numerous covariates) we  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
         compute health expectancies (without variances) in a first step  
         and then all the health expectancies with variances or standard          * Makefile:
         deviation (needs data from the Hessian matrices) which slows the          Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         computation.  
         In the future we should be able to stop the program is only health          * imach.c: Summary: minor typo
         expectancies and graph are needed without standard deviations.  
           * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           Author: Nicolas Brouard
         * imach.iss (Module):  
   2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): bugs in evsi + population file added in htm output file  
           * imach.c: Summary: Start working on projected prevalences
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
   2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module):  
           * imach.c: Summary: Adding ftolpl parameter
 2006-03-20  Brouard Nicolas  <brouard@localhost>          Author: N Brouard
   
         * imach.c (Module): <title> changed, corresponds to .htm file          We had difficulties to get smoothed confidence intervals. It was due
         name. <head> headers where missing.          to the period prevalence which wasn't computed accurately. The inner
           parameter ftolpl is now an outer parameter of the .imach parameter
         * Makefile (Module): 0.98g          file after estepm. If ftolpl is small 1.e-4 and estepm too,
           computation are long.
         * imach.c (Module): Weights can have a decimal point as for  
         English (a comma might work with a correct LC_NUMERIC environment,          * version.h: *** empty log message ***
         otherwise the weight is truncated).  
         Modification of warning when the covariates values are not 0 or          * imach.c: Summary: temporary
         1.  
         Version 0.98g  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * Makefile: *** empty log message ***
   
         * imach.c (Module): Comments concerning covariates added          * setup.iss.in: Summary: some new subdirs
   
         * noreg-setup.iss (Module): Version 0.98f          * imach.c: *** empty log message ***
   
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup          * setup.iss.in:
           Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         * imach.c (Module): refinements in the computation of lli if  
         status=-2 in order to have more reliable computation if stepm is  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
         not 1 month. Version 0.98f  
           * imach.c: *** empty log message ***
 2006-03-15  Brouard Nicolas  <brouard@localhost>  
   2015-10-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Bug if status = -2, the loglikelihood was  
         computed as likelihood omitting the logarithm. Version O.98e          * imach.c:
           Summary: 0.98r3 some clarification for graphs on likelihood contributions
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
   2015-10-01  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): varevsij Comments added explaining the second  
         table of variances if popbased=1 .          * imach.c: Summary: Some new graphs of contribution to likelihood
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  
         (Module): Function pstamp added  2015-09-30  Brouard Nicolas  <brouard@ined.fr>
         (Module): Version 0.98d  
           * Makefile:
 2006-03-06  Brouard Nicolas  <brouard@localhost>          Summary: Version read from version.h, itself read with cmake
   
         * imach.c (Module): Variance-covariance wrong links and          * imach.c: Summary: looking at better estimation of the hessian
         varian-covariance of ej. is needed (Saito).  
           Also a better criteria for convergence to the period prevalence And
 2006-02-27  Brouard Nicolas  <brouard@localhost>          therefore adding the number of years needed to converge. (The
           prevalence in any alive state shold sum to one
         * imach.c (Module): One freematrix added in mlikeli!  
           * Makefile: *** empty log message ***
 2006-02-26  Brouard Nicolas  <brouard@localhost>  
   2015-09-22  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Some improvements in processing parameter  
         filename with strsep.          * imach.c:
           Summary: Adding some overall graph on contribution to likelihood. Might change
 2006-02-24  Brouard Nicolas  <brouard@localhost>  
   2015-09-15  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Memory leaks checks with valgrind and:  
         datafile was not closed, some imatrix were not freed and on matrix          * Makefile: *** empty log message ***
         allocation too.  
           * imach.c: Summary: 0.98r0
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           - Some new graphs like survival functions
         * strsep.c (Module): Inclusion because not in mingw32!!!          - Some bugs fixed like model=1+age+V2.
   
         * setup.iss.in (Module): IMACHSETUPVERSION added          * ChangeLog, Makefile: Summary: 0.98r0
   
         * noreg-setup.iss (Module): added to cvs tree          * CMakeLists.txt: Summary: Some tests for setup.iss
   
         * Makefile (Module): IMACHSETUPVERSION added  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
 2006-01-30  BROUARD Nicolas  <brouard@localhost>          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
   
         * Makefile (Module, Module): Latest Makefile  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
   
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
   
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * noreg-setup.iss (Module): ADDED          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
   
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
   
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          * imach.c (Module): Merging 1.61 to 1.162
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          * prevlim.h (Module): 
   
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
   
 2005-09-30    <lievre@PC_00595>          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
           (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  
         (Module): If the status is missing at the last wave but we know  2010-04-29  brouard  <brouard@ined.fr>
         that the person is alive, then we can code his/her status as -2  
         (instead of missing=-1 in earlier versions) and his/her          * imach.c (Module): Checking covariates for more complex models
         contributions to the likelihood is 1 - Prob of dying from last          than V1+V2. A lot of change to be done. Unstable.
         health status (= 1-p13= p11+p12 in the easiest case of somebody in  
         the healthy state at last known wave). Version is 0.98  2010-04-26  brouard  <brouard@ined.fr>
   
 2004-05-20  Brouard Nicolas  <brouard@localhost>          * imach.c (Module): merging some libgsl code. Fixing computation
           of likelione (using inter/intrapolation if mle = 0) in order to
         * imach.c (Repository):          get same likelihood as if mle=1.
         Agnes added a direct estimation of mortality (without the need of          Some cleaning of code and comments added.
         computing period prevalence and differential mortality). Thus here  
         is version 0.97a which has been distributed to some people at  2009-10-29  brouard  <brouard@ined.fr>
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  
         mortality using covariates is not done today. Estimating direct          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
         mortality is a very different process because it doesn't need  
         interpolation because it is easy to get the lx from the force of  2006-06-30  Brouard Nicolas  <brouard@localhost>
         the mortality mux in the simplest case as for a Gompertz (log mux  
         = a + b*x . But we have been able to incorporate the new code          * imach.c (Module): Clarifications on computing e.j
         within former imach program (0.96d) without deteriorating too much  
         the understanding of the program.  2006-04-28  Brouard Nicolas  <brouard@localhost>
   
 2003-06-25    <brouard@BROUARD>          * imach.c (Module): Yes the sum of survivors was wrong since
           imach-114 because nhstepm was no more computed in the age
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't          loop. Now we define nhstepma in the age loop.
         exist so I changed back to asctime which exists.          (Module): In order to speed up (in case of numerous covariates) we
         (Module): Version 0.96b          compute health expectancies (without variances) in a first step
           and then all the health expectancies with variances or standard
 2003-06-24    <brouard@BROUARD>          deviation (needs data from the Hessian matrices) which slows the
           computation.
         * imach.c (Module): Some bugs corrected for windows. Also, when          In the future we should be able to stop the program is only health
         mle=-1 a template is output in file "or"mypar.txt with the design          expectancies and graph are needed without standard deviations.
         of the covariance matrix to be input.  
   2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  
           * imach.iss (Module): 
         * imach.c (Repository): Duplicated warning errors corrected.  
         (Repository): Elapsed time after each iteration is now output. It          * imach.c (Module): bugs in evsi + population file added in htm output file
         helps to forecast when convergence will be reached. Elapsed time  
         is stamped in powell.  We created a new html file for the graphs  2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         concerning matrix of covariance. It has extension -cov.htm.  
           * imach.c (Module): 
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  
   2006-03-20  Brouard Nicolas  <brouard@localhost>
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  
           * imach.c (Module): <title> changed, corresponds to .htm file
 2003-06-18  Brouard Nicolas  <brouard@homebrou>          name. <head> headers where missing.
   
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96          * Makefile (Module): 0.98g
   
 2003-06-17  Brouard Nicolas  <brouard@homebrou>          * imach.c (Module): Weights can have a decimal point as for
           English (a comma might work with a correct LC_NUMERIC environment,
           otherwise the weight is truncated).
         * imach.c (Repository): Check when date of death was earlier that          Modification of warning when the covariates values are not 0 or
         current date of interview. It may happen when the death was just          1. 
         prior to the death. In this case, dh was negative and likelihood          Version 0.98g
         was wrong (infinity). We still send an "Error" but patch by  
         assuming that the date of death was just one stepm after the  2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         interview.  
         (Repository): Because some people have very long ID (first column)          * imach.c (Module): Comments concerning covariates added
         we changed int to long in num[] and we added a new lvector for  
         memory allocation. But we also truncated to 8 characters (left          * noreg-setup.iss (Module): Version 0.98f
         truncation)  
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
         (Repository): No more line truncation errors.  
           * imach.c (Module): refinements in the computation of lli if
 2003-06-14  Brouard Nicolas  <brouard@homebrou>          status=-2 in order to have more reliable computation if stepm is
           not 1 month. Version 0.98f
         * imach.c (Repository): Add of a routine likelione (likelihood  
         only once) which prints on a text file  2006-03-15  Brouard Nicolas  <brouard@localhost>
         (ilk) the contributions to the likelihood for each  
         individual/wave.          * imach.c (Module): Bug if status = -2, the loglikelihood was
           computed as likelihood omitting the logarithm. Version O.98e
 2003-06-13  Brouard Nicolas  <brouard@homebrou>  
         * imach.c (Repository): Replace "freqsummary" at a correct  2006-03-14  Brouard Nicolas  <brouard@localhost>
         place. It differs from routine "prevalence" which may be called  
         many times. Probs is memory consuming and must be used with          * imach.c (Module): varevsij Comments added explaining the second
         parcimony.          table of variances if popbased=1 .
           (Module): Covariances of eij, ekl added, graphs fixed, new html link.
 2003-06-17    <brouard@BROUARD>          (Module): Function pstamp added
           (Module): Version 0.98d 
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.  2006-03-06  Brouard Nicolas  <brouard@localhost>
   
 2003-05-16  Brouard Nicolas  <brouard@brouard>          * imach.c (Module): Variance-covariance wrong links and
         * imach.c (Module): Insert of a warning if the delay between two          varian-covariance of ej. is needed (Saito).
         waves is negative.  
   2006-02-27  Brouard Nicolas  <brouard@localhost>
         * imach.c (Module):  
           * imach.c (Module): One freematrix added in mlikeli!
 2003-05-03    <brouard@BROUARD>  
   2006-02-26  Brouard Nicolas  <brouard@localhost>
         * imach.c: Some cleaning  
           * imach.c (Module): Some improvements in processing parameter
 2003-03-28    <brouard@BROUARD>          filename with strsep.
         * imach.c (Module): In version up to 0.92 likelihood was computed  
         as if date of death was unknown. Death was treated as any other  2006-02-24  Brouard Nicolas  <brouard@localhost>
         health state: the date of the interview describes the actual state  
         and not the date of a change in health state. The former idea was          * imach.c (Module): Memory leaks checks with valgrind and:
         to consider that at each interview the state was recorded          datafile was not closed, some imatrix were not freed and on matrix
         (healthy, disable or death) and IMaCh was corrected; but when we          allocation too.
         introduced the exact date of death then we should have modified  
         the contribution of an exact death to the likelihood. This new  2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         contribution is smaller and very dependent of the step unit  
         stepm. It is no more the probability to die between last interview          * strsep.c (Module): Inclusion because not in mingw32!!!
         and month of death but the probability to survive from last  
         interview up to one month before death multiplied by the          * setup.iss.in (Module): IMACHSETUPVERSION added
         probability to die within a month. Thanks to Chris  
         Jackson for correcting this bug.  Former versions increased          * noreg-setup.iss (Module): added to cvs tree
         mortality artificially. The bad side is that we add another loop  
         which slows down the processing. The difference can be up to 10%          * Makefile (Module): IMACHSETUPVERSION added
         lower mortality.  
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
 2002-05-30    <brouard@BROUARD>  
         *          * Makefile (Module, Module): Latest Makefile
         * imach.c (Module): Add correlation matrix of one-step  
         probabilities and covariance matrix          * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

Removed from v.1.49  
changed lines
  Added in v.1.66


FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>