Diff for /imach/src/ChangeLog between versions 1.50 and 1.66

version 1.50, 2022/04/13 17:52:55 version 1.66, 2023/05/08 18:48:01
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 2022-04-13  Brouard Nicolas  <brouard@brouard.name>  2023-05-08  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): Adding link to text data files          *  (Module): Error V0 when result:. and model 1+age+V1: fixed
   
 2022-04-11  Nicolas Brouard   <brouard@ined.fr>  2023-04-29  Nicolas Brouard  <brouard@ined.fr>
   
         * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed          * imach.c (Module): Inverting the model equation and fixingg bugs
           in the drawings
 2022-04-05  Brouard Nicolas  <brouard@ined.fr>          "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
   
         * imach.c (Module): Fixed covariates (dummy or quantitative)  2023-04-24  Nicolas Brouard  <brouard@ined.fr>
         with missing values have never been allowed but are ERRORS and  
         program quits. Standard deviations of fixed covariates were          * imach.c (Module): some bugs in printinggnuplot 
         wrongly computed. Mean and standard deviations of time varying  
         covariates are still not computed.  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
   
 2022-03-17  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Version 0.99r42 needed a newer version of
           Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         * 99r25 Improvements in fixing discrepancies between covariates          version 5.0 or 5.1 distributed with IMaCh.
         missing in result line but in model.  
   2022-09-18  Nicolas Brouard   <brouard@ined.fr>
 *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>  
         * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett          * imach.c (Module): Fixing when a state in the data is 0 or higher
           than lstate+ndeath. Fixing the plot of contribution to Likelihood.
 *2021-03-08  Nicolas Brouard   <brouard@ined.fr>  
   2022-09-16  Nicolas Brouard   <brouard@ined.fr>
         * ./ (Module): Fixed bug on result:  
           * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
 *2021-02-20  Nicolas Brouard   <brouard@ined.fr>  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
         * imach.c (Module): Fix bug on quitting after result lines!  
         (Module): Version 0.99r21          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
   
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error          * imach.c (Module): Version 0.99r39 with colored dummy covariates
           (fixed or time varying), using new last columns of
           ILK_parameter.txt file.
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>  
   2022-09-11  Nicolas Brouard   <brouard@ined.fr>
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.  
           * imach.c (Module): Adding timevarying products of any kinds,
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>          should work before shifting cotvar from ncovcol+nqv columns in
           order to have a correspondance between the column of cotvar and
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy          the id of column.
         and life table from the data without any state)          (Module): Some cleaning and adding covariates in ILK.txt
   
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>  2022-09-09  Nicolas Brouard   <brouard@ined.fr>
   
         * version.h: Summary: version 0.99.r19          * imach.c (Module): Many improvements for fixing products of fixed
           timevarying as well as fixed * fixed, and test with quantitative
         * imach.c: Summary: Projection syntax simplified          covariate.
         We can now start projections, forward or backward, from the mean date  
         of inteviews up to or down to a number of years of projection:  2022-09-04  Nicolas Brouard   <brouard@ined.fr>
         prevforecast=1 yearsfproj=15.3 mobil_average=0  
         or          * imach.c (Module): Now the easy runs i.e. without result or
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0          model=1+age only did not work. The defautl combination should be 1
         or          and not 0 because everything hasn't been tranformed yet.
         prevbackcast=1 yearsbproj=12.3 mobil_average=1  
         or  2022-09-02  Nicolas Brouard   <brouard@ined.fr>
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1  
           * imach.c: Version 0.99r35 because it outputs same results with
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>          1+age+V1+V1*age for females and 1+age for females only
           (education=1 noweight)
         * imach.c: Summary: doxygen tex bug  
   2022-08-31  Nicolas Brouard   <brouard@ined.fr>
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
         * imach.c: Summary: There was some wrong lines added  
   2022-08-21  Nicolas Brouard   <brouard@ined.fr>
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Version 0.99r33 A lot of changes in
         * Makefile, imach.c: *** empty log message ***          reassigning covariates: my first idea was that people will always
           use the first covariate V1 into the model but in fact they are
         * ChangeLog: Summary: C=          producing data with many covariates and can use an equation model
           with some of the covariate; it means that in a model V2+V3 instead
         * imach.c: Summary: Some updates          of codtabm(k,Tvaraff[j]) which calculates for combination k, for
           three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         * imach.c: Summary: Before ncovmax          the equation model is restricted to two variables only (V2, V3)
           and the combination for V2 should be codtabm(k,1) instead of
         * version.h: *** empty log message ***          (codtabm(k,2), and the code should be
           codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
         * imach.c: Summary: 0.99r18 unlimited number of individuals          made. All of these should be simplified once a day like we did in
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.          hpxij() for example by using precov[nres] which is computed in
           decoderesult for each nres of each resultline. Loop should be done
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>          on the equation model globally by distinguishing only product with
           age (which are changing with age) and no more on type of
         * imach.c: Summary: Bug for young ages (<-30) will be in r17          covariates, single dummies, single covariates. 
   
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>  2022-08-06  Nicolas Brouard   <brouard@ined.fr>
   
         * Makefile: Summary: 0.99r16          *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2022-08-03  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bugs fixed          *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  2022-07-25  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17          * imach.c (Module): Error cptcovn instead of nsd in bmij (was
           coredumped, revealed by Feiuno, thank you.
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>  
   2022-07-23  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some bugs fixed  
           * r29 W and not sqrt(Wald)
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>  
   2022-07-22  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  
         Summary: Bug fixed by providing frequencies only for non missing covariates          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
   
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>  2022-06-02  Brouard Nicolas  <brouard@brouard.name>
   
         * imach.c: Summary: some minor bugs          * imach.c (Module): Adding the Wald tests from the log to the main
           htm for better display of the maximum likelihood estimators.
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>  
   2022-05-30  Brouard Nicolas  <brouard@brouard.name>
         * README.txt: *** empty log message ***  
           * imach.c: With products of covariates (age or dummies or
         * imach.c: Summary: Some bugs fixed, valgrind tested          quantitatives), estimates of parameters were good but when
           estimating variances the positions of newly created covariates
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>          were wrongly assigned and results were wrong. Thank to Feinua_Sun!
   
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  2022-05-24  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:          * imach.c (Module): Some attempts to find a bug of wrong estimates
         Summary: Computing mean and stdeviation of fixed quantitative variables          of confidencce intervals with product in the equation modelC
   
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>  2022-05-15  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some minor bugs fixed          * imach.c (Module):  Some minor improvements
   
         * version.h: *** empty log message ***  2022-04-13  Brouard Nicolas  <brouard@brouard.name>
   
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Adding link to text data files
   
         * imach.c: *** empty log message ***  2022-04-11  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Adding second argument for quitting          * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
   
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  2022-04-05  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile, README.txt, imach.c: Summary: 0.99r15          * imach.c (Module): Fixed covariates (dummy or quantitative)
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
         * imach.c: Summary: temporary working  
   2022-03-17  Brouard Nicolas  <brouard@ined.fr>
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>  
           * 99r25 Improvements in fixing discrepancies between covariates
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)          missing in result line but in model. 
   
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
         * imach.c: Summary: BOM files can be read now  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>  
           * ./ (Module): Fixed bug on result:
         * imach.c: Summary: Graphs improvements  
   *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Saito's color  
           * imach.c (Module): Fix bug on quitting after result lines!
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>          (Module): Version 0.99r21
   
         * imach.c: Summary: Version 0.99r14  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
   
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
   
         * imach.c: Summary: More documentation on projections  
   2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)  
           *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
         * imach.c: Summary: Some bug with rint  
   2020-02-22  Brouard Nicolas  <brouard@ined.fr>
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): imach.c Update mle=-3 (for computing Life expectancy
         * imach.c: *** empty log message ***          and life table from the data without any state)
   
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>  2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Code into subroutine, cleanings          * version.h: Summary: version 0.99.r19
   
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Projection syntax simplified
           We can now start projections, forward or backward, from the mean date
         * imach.c:          of inteviews up to or down to a number of years of projection:
         Summary: backprojection and confidence intervals of backprevalence          prevforecast=1 yearsfproj=15.3 mobil_average=0
           or
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
           or
         * imach.c: Summary: temporary save for backprojection          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          * imach.c: Summary: doxygen tex bug
   
         * imach.c: Summary: Labels in graphs  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: There was some wrong lines added
   
         * imach.c: Summary: to save  2019-05-09  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>          * Makefile, imach.c: *** empty log message ***
   
         * imach.c: *** empty log message ***          * ChangeLog: Summary: C=
   
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some updates
   
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1          * imach.c: Summary: Before ncovmax
   
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>          * version.h: *** empty log message ***
   
         * imach.c: Summary: Gnuplot indexations fixed (humm)          * imach.c: Summary: 0.99r18 unlimited number of individuals
           The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
         * imach.c:  
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Bug for young ages (<-30) will be in r17
   
         * imach.c: Summary: Version 0.99r12  2018-12-05  Brouard Nicolas  <brouard@ined.fr>
         Some cleanings, conformed with updated documentation.  
           * Makefile: Summary: 0.99r16
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
         * version.h: *** empty log message ***  
           * imach.c: Summary: Some bugs fixed
         * version.h: Summary:0.99r11  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:  Summary: Bug for young ages (<-30) will be in r17
         * imach.c: Summary: Temp  
   2018-05-02  Brouard Nicolas  <brouard@ined.fr>
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some bugs fixed
         * imach.c: Summary: Temporary  
   2018-05-01  Brouard Nicolas  <brouard@ined.fr>
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed          Summary: Bug fixed by providing frequencies only for non missing covariates
   
         * imach.c: Summary: Fixing data parameter line  2018-04-27  Brouard Nicolas  <brouard@ined.fr>
   
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: some minor bugs
   
         * imach.c: Summary: 0.99 in progress  2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>          * README.txt: *** empty log message ***
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Some bugs fixed, valgrind tested
   
         * imach.c: Summary: not working  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
         * imach.c: Summary: continue          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Starting values from frequencies  
           * imach.c: Summary: Some minor bugs fixed
         * imach.c: *** empty log message ***  
           * version.h: *** empty log message ***
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>  
   2018-02-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: *** empty log message ***
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Adding second argument for quitting
         * imach.c: Summary: Fixing a lots  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
         * imach.c: Summary: gnuplot problem in Back projection to fix          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
         * imach.c: Summary: Better  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: temporary working
   
         * imach.c:  2017-07-19  Brouard Nicolas  <brouard@ined.fr>
         Summary: Improvement in Powell output in order to copy and paste  
           * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
         * imach.c: Summary: Starting tests of 0.99  
   2017-07-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: to valgrind  
           * imach.c: Summary: BOM files can be read now
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>  
   2017-06-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Graphs improvements
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Saito's color
         * imach.c: *** empty log message ***  
   2017-06-29  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: not working  
           * imach.c: Summary: Version 0.99r14
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>  
   2017-06-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: not working  
           * imach.c: Summary: More documentation on projections
         * imach.c: Summary: Not working  
           * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Some bug with rint
         * imach.c: Summary: Completing for func too  
   2017-05-24  Brouard Nicolas  <brouard@ined.fr>
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c: Summary: Fixing some arrays, still debugging  
   2017-05-23  Brouard Nicolas  <brouard@ined.fr>
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Code into subroutine, cleanings
         * imach.c:  
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  2017-05-18  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>          * imach.c:
           Summary: backprojection and confidence intervals of backprevalence
         * imach.c: Summary: temp  
   2017-05-13  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: saving but not running  
           * imach.c: Summary: temporary save for backprojection
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
         * imach.c: Summary: Fixes  
   2017-04-26  Brouard Nicolas  <brouard@ined.fr>
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  
           * imach.c: Summary: Labels in graphs
         * setup.iss, Makefile, version.h: *** empty log message ***  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary  
           * imach.c: Summary: to save
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  
           * imach.c: *** empty log message ***
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-05  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: minor bug  
           * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
         * imach.c: Summary: 0.99r2  
   2017-04-04  Brouard Nicolas  <brouard@ined.fr>
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Gnuplot indexations fixed (humm)
         * imach.c: *** empty log message ***  
           * imach.c:
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
   
         * imach.c: Summary: 0.99 Back projections  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Version 0.99r12
           Some cleanings, conformed with updated documentation.
         * imach.c: Summary: Experimental backcast  
   2017-03-30  Brouard Nicolas  <brouard@ined.fr>
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>  
           * version.h: *** empty log message ***
         * imach.c: Summary: 0.98r4 Warning and status=-2  
           * version.h: Summary:0.99r11
         Version 0.98r4 is now:  
          - displaying an error when status is -1, date of interview unknown and date of death known;  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.          * imach.c: Summary: Temp
   
         * Makefile: *** empty log message ***  2017-03-27  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Temporary
   
         * Makefile: *** empty log message ***  2017-03-08  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4 working          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
   
         * Makefile: Summary: linuxrpm added          * imach.c: Summary: Fixing data parameter line
   
         * Makefile: *** empty log message ***  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temporary not working          * imach.c: Summary: 0.99 in progress
   
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r4          * imach.c: *** empty log message ***
   
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: not working
   
         * Makefile: *** empty log message ***  2016-09-08  Brouard Nicolas  <brouard@ined.fr>
   
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: continue
   
         * Makefile:  2016-09-07  Brouard Nicolas  <brouard@ined.fr>
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  
           * imach.c: Summary: Starting values from frequencies
         * imach.c: Summary: minor typo  
           * imach.c: *** empty log message ***
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
   2016-09-02  Brouard Nicolas  <brouard@ined.fr>
         Author: Nicolas Brouard  
           * imach.c: *** empty log message ***
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  
   2016-08-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Start working on projected prevalences  
           * imach.c: Summary: Fixing a lots
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>  
   2016-08-29  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Adding ftolpl parameter  
         Author: N Brouard          * imach.c: Summary: gnuplot problem in Back projection to fix
   
         We had difficulties to get smoothed confidence intervals. It was due          * imach.c: Summary: Better
         to the period prevalence which wasn't computed accurately. The inner  
         parameter ftolpl is now an outer parameter of the .imach parameter  2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         file after estepm. If ftolpl is small 1.e-4 and estepm too,  
         computation are long.          * imach.c:
           Summary: Improvement in Powell output in order to copy and paste
         * version.h: *** empty log message ***  
           * imach.c: Summary: Starting tests of 0.99
         * imach.c: Summary: temporary  
           * imach.c: Summary: to valgrind
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>  
   2016-08-25  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * imach.c: *** empty log message ***
         * setup.iss.in: Summary: some new subdirs  
   2016-08-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c: *** empty log message ***
         * setup.iss.in:  
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts          * imach.c: Summary: not working
   
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>  2016-08-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: Summary: not working
   
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Not working
   
         * imach.c:  2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         Summary: 0.98r3 some clarification for graphs on likelihood contributions  
           * imach.c: Summary: Completing for func too
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>  
   2016-07-22  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Some new graphs of contribution to likelihood  
           * imach.c: Summary: Fixing some arrays, still debugging
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>  
   2016-07-21  Brouard Nicolas  <brouard@ined.fr>
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake          * imach.c:
           Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
         * imach.c: Summary: looking at better estimation of the hessian  
   2016-07-12  Brouard Nicolas  <brouard@ined.fr>
         Also a better criteria for convergence to the period prevalence And  
         therefore adding the number of years needed to converge. (The          * imach.c: Summary: temp
         prevalence in any alive state shold sum to one  
           * imach.c: Summary: saving but not running
         * Makefile: *** empty log message ***  
   2016-07-01  Brouard Nicolas  <brouard@ined.fr>
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Fixes
         * imach.c:  
         Summary: Adding some overall graph on contribution to likelihood. Might change  2016-02-19  Brouard Nicolas  <brouard@ined.fr>
   
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>          * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
   
         * Makefile: *** empty log message ***          * setup.iss, Makefile, version.h: *** empty log message ***
   
         * imach.c: Summary: 0.98r0          * imach.c: Summary: temporary
   
         - Some new graphs like survival functions  2016-02-17  Brouard Nicolas  <brouard@ined.fr>
         - Some bugs fixed like model=1+age+V2.  
           * imach.c: Summary: Probably last 0.98 stable version 0.98r6
         * ChangeLog, Makefile: Summary: 0.98r0  
   2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         * CMakeLists.txt: Summary: Some tests for setup.iss  
           * imach.c: Summary: minor bug
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
           * imach.c: Summary: 0.99r2
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  
   2016-02-15  Brouard Nicolas  <brouard@ined.fr>
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  
           * imach.c: *** empty log message ***
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.  
   2016-02-12  Brouard Nicolas  <brouard@ined.fr>
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  
           * imach.c: Summary: 0.99 Back projections
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  
   2015-12-23  Brouard Nicolas  <brouard@ined.fr>
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>  
           * imach.c: Summary: Experimental backcast
         * imach.c (Module): Merging 1.61 to 1.162  
   2015-12-18  Brouard Nicolas  <brouard@ined.fr>
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  
           * imach.c: Summary: 0.98r4 Warning and status=-2
         * prevlim.h (Module):  
           Version 0.98r4 is now:
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>           - displaying an error when status is -1, date of interview unknown and date of death known;
            - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...          Older changes concerning s=-2, dating from 2005 have been supersed.
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
           * Makefile: *** empty log message ***
 2010-04-29  brouard  <brouard@ined.fr>  
   2015-12-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.          * Makefile: *** empty log message ***
   
 2010-04-26  brouard  <brouard@ined.fr>          * imach.c: Summary: 0.98r4 working
   
         * imach.c (Module): merging some libgsl code. Fixing computation          * Makefile: Summary: linuxrpm added
         of likelione (using inter/intrapolation if mle = 0) in order to  
         get same likelihood as if mle=1.          * Makefile: *** empty log message ***
         Some cleaning of code and comments added.  
           * imach.c: Summary: temporary not working
 2009-10-29  brouard  <brouard@ined.fr>  
   2015-12-11  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  
           * imach.c: Summary: 0.98r4
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
   2015-12-08  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Clarifications on computing e.j  
           * Makefile: *** empty log message ***
 2006-04-28  Brouard Nicolas  <brouard@localhost>  
   2015-11-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Yes the sum of survivors was wrong since  
         imach-114 because nhstepm was no more computed in the age          * Makefile:
         loop. Now we define nhstepma in the age loop.          Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         (Module): In order to speed up (in case of numerous covariates) we  
         compute health expectancies (without variances) in a first step          * imach.c: Summary: minor typo
         and then all the health expectancies with variances or standard  
         deviation (needs data from the Hessian matrices) which slows the          * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
         computation.  
         In the future we should be able to stop the program is only health          Author: Nicolas Brouard
         expectancies and graph are needed without standard deviations.  
   2015-11-18  Brouard Nicolas  <brouard@ined.fr>
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: Summary: Start working on projected prevalences
         * imach.iss (Module):  
   2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): bugs in evsi + population file added in htm output file  
           * imach.c: Summary: Adding ftolpl parameter
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          Author: N Brouard
   
         * imach.c (Module):          We had difficulties to get smoothed confidence intervals. It was due
           to the period prevalence which wasn't computed accurately. The inner
 2006-03-20  Brouard Nicolas  <brouard@localhost>          parameter ftolpl is now an outer parameter of the .imach parameter
           file after estepm. If ftolpl is small 1.e-4 and estepm too,
         * imach.c (Module): <title> changed, corresponds to .htm file          computation are long.
         name. <head> headers where missing.  
           * version.h: *** empty log message ***
         * Makefile (Module): 0.98g  
           * imach.c: Summary: temporary
         * imach.c (Module): Weights can have a decimal point as for  
         English (a comma might work with a correct LC_NUMERIC environment,  2015-10-27  Brouard Nicolas  <brouard@ined.fr>
         otherwise the weight is truncated).  
         Modification of warning when the covariates values are not 0 or          * Makefile: *** empty log message ***
         1.  
         Version 0.98g          * setup.iss.in: Summary: some new subdirs
   
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * imach.c: *** empty log message ***
   
         * imach.c (Module): Comments concerning covariates added          * setup.iss.in:
           Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         * noreg-setup.iss (Module): Version 0.98f  
   2015-10-24  Brouard Nicolas  <brouard@ined.fr>
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup  
           * imach.c: *** empty log message ***
         * imach.c (Module): refinements in the computation of lli if  
         status=-2 in order to have more reliable computation if stepm is  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
         not 1 month. Version 0.98f  
           * imach.c:
 2006-03-15  Brouard Nicolas  <brouard@localhost>          Summary: 0.98r3 some clarification for graphs on likelihood contributions
   
         * imach.c (Module): Bug if status = -2, the loglikelihood was  2015-10-01  Brouard Nicolas  <brouard@ined.fr>
         computed as likelihood omitting the logarithm. Version O.98e  
           * imach.c: Summary: Some new graphs of contribution to likelihood
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
   2015-09-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): varevsij Comments added explaining the second  
         table of variances if popbased=1 .          * Makefile:
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.          Summary: Version read from version.h, itself read with cmake
         (Module): Function pstamp added  
         (Module): Version 0.98d          * imach.c: Summary: looking at better estimation of the hessian
   
 2006-03-06  Brouard Nicolas  <brouard@localhost>          Also a better criteria for convergence to the period prevalence And
           therefore adding the number of years needed to converge. (The
         * imach.c (Module): Variance-covariance wrong links and          prevalence in any alive state shold sum to one
         varian-covariance of ej. is needed (Saito).  
           * Makefile: *** empty log message ***
 2006-02-27  Brouard Nicolas  <brouard@localhost>  
   2015-09-22  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): One freematrix added in mlikeli!  
           * imach.c:
 2006-02-26  Brouard Nicolas  <brouard@localhost>          Summary: Adding some overall graph on contribution to likelihood. Might change
   
         * imach.c (Module): Some improvements in processing parameter  2015-09-15  Brouard Nicolas  <brouard@ined.fr>
         filename with strsep.  
           * Makefile: *** empty log message ***
 2006-02-24  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.98r0
         * imach.c (Module): Memory leaks checks with valgrind and:  
         datafile was not closed, some imatrix were not freed and on matrix          - Some new graphs like survival functions
         allocation too.          - Some bugs fixed like model=1+age+V2.
   
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>          * ChangeLog, Makefile: Summary: 0.98r0
   
         * strsep.c (Module): Inclusion because not in mingw32!!!          * CMakeLists.txt: Summary: Some tests for setup.iss
   
         * setup.iss.in (Module): IMACHSETUPVERSION added  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * noreg-setup.iss (Module): added to cvs tree          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
   
         * Makefile (Module): IMACHSETUPVERSION added  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
   
 2006-01-30  BROUARD Nicolas  <brouard@localhost>          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
   
         * Makefile (Module, Module): Latest Makefile  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
   
 2006-01-27  BROUARD Nicolas  <brouard@localhost>  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
   
         * noreg-setup.iss (Module): ADDED          * imach.c (Module): Merging 1.61 to 1.162
   
 2006-01-24  BROUARD Nicolas  <brouard@localhost>  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
   
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          * prevlim.h (Module): 
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
           (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  
   2010-04-29  brouard  <brouard@ined.fr>
 2005-09-30    <lievre@PC_00595>  
           * imach.c (Module): Checking covariates for more complex models
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.          than V1+V2. A lot of change to be done. Unstable.
         (Module): If the status is missing at the last wave but we know  
         that the person is alive, then we can code his/her status as -2  2010-04-26  brouard  <brouard@ined.fr>
         (instead of missing=-1 in earlier versions) and his/her  
         contributions to the likelihood is 1 - Prob of dying from last          * imach.c (Module): merging some libgsl code. Fixing computation
         health status (= 1-p13= p11+p12 in the easiest case of somebody in          of likelione (using inter/intrapolation if mle = 0) in order to
         the healthy state at last known wave). Version is 0.98          get same likelihood as if mle=1.
           Some cleaning of code and comments added.
 2004-05-20  Brouard Nicolas  <brouard@localhost>  
   2009-10-29  brouard  <brouard@ined.fr>
         * imach.c (Repository):  
         Agnes added a direct estimation of mortality (without the need of          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
         computing period prevalence and differential mortality). Thus here  
         is version 0.97a which has been distributed to some people at  2006-06-30  Brouard Nicolas  <brouard@localhost>
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  
         mortality using covariates is not done today. Estimating direct          * imach.c (Module): Clarifications on computing e.j
         mortality is a very different process because it doesn't need  
         interpolation because it is easy to get the lx from the force of  2006-04-28  Brouard Nicolas  <brouard@localhost>
         the mortality mux in the simplest case as for a Gompertz (log mux  
         = a + b*x . But we have been able to incorporate the new code          * imach.c (Module): Yes the sum of survivors was wrong since
         within former imach program (0.96d) without deteriorating too much          imach-114 because nhstepm was no more computed in the age
         the understanding of the program.          loop. Now we define nhstepma in the age loop.
           (Module): In order to speed up (in case of numerous covariates) we
 2003-06-25    <brouard@BROUARD>          compute health expectancies (without variances) in a first step
           and then all the health expectancies with variances or standard
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't          deviation (needs data from the Hessian matrices) which slows the
         exist so I changed back to asctime which exists.          computation.
         (Module): Version 0.96b          In the future we should be able to stop the program is only health
           expectancies and graph are needed without standard deviations.
 2003-06-24    <brouard@BROUARD>  
   2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         * imach.c (Module): Some bugs corrected for windows. Also, when  
         mle=-1 a template is output in file "or"mypar.txt with the design          * imach.iss (Module): 
         of the covariance matrix to be input.  
           * imach.c (Module): bugs in evsi + population file added in htm output file
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  
   2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         * imach.c (Repository): Duplicated warning errors corrected.  
         (Repository): Elapsed time after each iteration is now output. It          * imach.c (Module): 
         helps to forecast when convergence will be reached. Elapsed time  
         is stamped in powell.  We created a new html file for the graphs  2006-03-20  Brouard Nicolas  <brouard@localhost>
         concerning matrix of covariance. It has extension -cov.htm.  
           * imach.c (Module): <title> changed, corresponds to .htm file
 2003-06-23  Brouard Nicolas  <brouard@homebrou>          name. <head> headers where missing.
   
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.          * Makefile (Module): 0.98g
   
 2003-06-18  Brouard Nicolas  <brouard@homebrou>          * imach.c (Module): Weights can have a decimal point as for
           English (a comma might work with a correct LC_NUMERIC environment,
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96          otherwise the weight is truncated).
           Modification of warning when the covariates values are not 0 or
 2003-06-17  Brouard Nicolas  <brouard@homebrou>          1. 
           Version 0.98g
   
         * imach.c (Repository): Check when date of death was earlier that  2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         current date of interview. It may happen when the death was just  
         prior to the death. In this case, dh was negative and likelihood          * imach.c (Module): Comments concerning covariates added
         was wrong (infinity). We still send an "Error" but patch by  
         assuming that the date of death was just one stepm after the          * noreg-setup.iss (Module): Version 0.98f
         interview.  
         (Repository): Because some people have very long ID (first column)          * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
         we changed int to long in num[] and we added a new lvector for  
         memory allocation. But we also truncated to 8 characters (left          * imach.c (Module): refinements in the computation of lli if
         truncation)          status=-2 in order to have more reliable computation if stepm is
           not 1 month. Version 0.98f
         (Repository): No more line truncation errors.  
   2006-03-15  Brouard Nicolas  <brouard@localhost>
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  
           * imach.c (Module): Bug if status = -2, the loglikelihood was
         * imach.c (Repository): Add of a routine likelione (likelihood          computed as likelihood omitting the logarithm. Version O.98e
         only once) which prints on a text file  
         (ilk) the contributions to the likelihood for each  2006-03-14  Brouard Nicolas  <brouard@localhost>
         individual/wave.  
           * imach.c (Module): varevsij Comments added explaining the second
 2003-06-13  Brouard Nicolas  <brouard@homebrou>          table of variances if popbased=1 .
         * imach.c (Repository): Replace "freqsummary" at a correct          (Module): Covariances of eij, ekl added, graphs fixed, new html link.
         place. It differs from routine "prevalence" which may be called          (Module): Function pstamp added
         many times. Probs is memory consuming and must be used with          (Module): Version 0.98d 
         parcimony.  
   2006-03-06  Brouard Nicolas  <brouard@localhost>
 2003-06-17    <brouard@BROUARD>  
           * imach.c (Module): Variance-covariance wrong links and
         * timeval.h (Module): Added included file to make use of          varian-covariance of ej. is needed (Saito).
         gettimeofday working on win32 with cygwin.  
   2006-02-27  Brouard Nicolas  <brouard@localhost>
 2003-05-16  Brouard Nicolas  <brouard@brouard>  
         * imach.c (Module): Insert of a warning if the delay between two          * imach.c (Module): One freematrix added in mlikeli!
         waves is negative.  
   2006-02-26  Brouard Nicolas  <brouard@localhost>
         * imach.c (Module):  
           * imach.c (Module): Some improvements in processing parameter
 2003-05-03    <brouard@BROUARD>          filename with strsep.
   
         * imach.c: Some cleaning  2006-02-24  Brouard Nicolas  <brouard@localhost>
   
 2003-03-28    <brouard@BROUARD>          * imach.c (Module): Memory leaks checks with valgrind and:
         * imach.c (Module): In version up to 0.92 likelihood was computed          datafile was not closed, some imatrix were not freed and on matrix
         as if date of death was unknown. Death was treated as any other          allocation too.
         health state: the date of the interview describes the actual state  
         and not the date of a change in health state. The former idea was  2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
         to consider that at each interview the state was recorded  
         (healthy, disable or death) and IMaCh was corrected; but when we          * strsep.c (Module): Inclusion because not in mingw32!!!
         introduced the exact date of death then we should have modified  
         the contribution of an exact death to the likelihood. This new          * setup.iss.in (Module): IMACHSETUPVERSION added
         contribution is smaller and very dependent of the step unit  
         stepm. It is no more the probability to die between last interview          * noreg-setup.iss (Module): added to cvs tree
         and month of death but the probability to survive from last  
         interview up to one month before death multiplied by the          * Makefile (Module): IMACHSETUPVERSION added
         probability to die within a month. Thanks to Chris  
         Jackson for correcting this bug.  Former versions increased  2006-01-30  BROUARD Nicolas  <brouard@localhost>
         mortality artificially. The bad side is that we add another loop  
         which slows down the processing. The difference can be up to 10%          * Makefile (Module, Module): Latest Makefile
         lower mortality.  
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
 2002-05-30    <brouard@BROUARD>  
         *  2006-01-27  BROUARD Nicolas  <brouard@localhost>
         * imach.c (Module): Add correlation matrix of one-step  
         probabilities and covariance matrix          * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

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changed lines
  Added in v.1.66


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