Diff for /imach/src/ChangeLog between versions 1.41 and 1.69

version 1.41, 2021/02/11 19:49:33 version 1.69, 2024/04/30 10:58:21
Line 1 Line 1
 2021-02-11  Nicolas J Brouard   <nbrouard@mac02049.local>  2024-04-30  Nicolas Brouard   <brouard@ined.fr>
   
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.          * (Module): In version 0.99s4, we incorporated the calculation of
           the std error of the proportion of total life expectancy spent in
 2020-02-22  Brouard Nicolas  <brouard@brouard.name>          a specific state Var(e.j/e..) using the formula of Var(X/Y)
           depending only of the variances of X and Y and expectancies.
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy  
         and life table from the data without any state)  2024-04-24  Nicolas Brouard   <brouard@ined.fr>
   
 2019-05-20  Brouard Nicolas  <brouard@brouard.name>          * (Module): This version comes late after having tested
           successfully the praxis C version of Buckhardt.  But Buckardt's
         * version.h: Summary: version 0.99.r19          version was difficult to read and Gegenfurtner's version had a few
           typos which made its results less reliable than Buckhardt's
         * imach.c: Summary: Projection syntax simplified          results.  The most important work consisted in retyping the Brent
         We can now start projections, forward or backward, from the mean date          original PRAXIS program written in Algol W (published with errors,
         of inteviews up to or down to a number of years of projection:          ommitting the transposition of matrix V before its QR reduction
         prevforecast=1 yearsfproj=15.3 mobil_average=0          from Golub. I used the recent "awe" compiler from Gkynn Webster.
         or          The awe library had errors, for example in arc tangent function
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0          which have been fixed.
         or  
         prevbackcast=1 yearsbproj=12.3 mobil_average=1          The main objective was to get identical results with the three
         or          versions: (1) Algol W, (2) Buckhardt'C version as well (3)
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1          Gegenfürtner C versions on the various test functions published by
           Brent in 1973 in Algol W.
 2019-05-18  Brouard Nicolas  <brouard@brouard.name>  
           Also, in order to compare them, the random function had to produce
         * imach.c: Summary: doxygen tex bug          the same sequence for the 3 softwares. The random function used in
           imach corresponds to original Brent's random function written in
 2019-05-16  Brouard Nicolas  <brouard@brouard.name>          Algol W.  Other point, in Algol W, the arrays of dimension n are
           'normal' mathematical arrays starting from 1 to n. But this is a
         * imach.c: Summary: There was some wrong lines added          real issue in C where, by default, arrays are starting from 0 to
           n-1. In Buckhardt, as well as in Gegenfürtner C code, it can be
 2019-05-09  Brouard Nicolas  <brouard@brouard.name>          seen that authors while trying to mimick original Brent Algol W
           code are hesitating by changing either a loop originally from 1 to
         * Makefile, imach.c: *** empty log message ***          n in a loop from 0 to n-1, or keeping Brent's loop from 1 to n and
           shifting the index from original X(I) in Algol W to x[i-1] in C.
         * ChangeLog: Summary: C=          But as IMaCh is using, since the beginning, the Numerical Recipes
           functions vector or matrix, I changed Geggenfürtner code to mimick
         * imach.c: Summary: Some updates          the original Algol W arrays. Thus the X(I) is translated in C as
           x[i] which minimizes the errors. The Golub QR algorithm was
         * imach.c: Summary: Before ncovmax          published in Algol with overflow errors which were reproduced in
           Brent's Algol W code. Buckhardt code fixed these errors which are
         * version.h: *** empty log message ***          much more problematic in C than in Algol W.  Thus Buckhardt code
           seems very safe, but i haven't chosen it for IMaCh because the C
         * imach.c: Summary: 0.99r18 unlimited number of individuals          style is horrible and almost unreadable compared to Gegenfürtner
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.          CO code which is very close to Brent's original. Also what makes
           Buckhardt code more difficult to read is, instead of passing the
 2018-12-13  Brouard Nicolas  <brouard@brouard.name>          minimum of parameters in the functions calls, as it is in Algol
           Brent's code or Gegenfürtner's code, the list of parameters is
         * imach.c: Summary: Bug for young ages (<-30) will be in r17          high. For example, the flin function LONG REAL PROCEDURE FLIN
           (LONG REAL VALUE L) has only one parameter in Algol W, the
 2018-12-05  Brouard Nicolas  <brouard@brouard.name>          Gegenfürtner flin function had two parameters: static double
           flin(l, j) double l; { int i; double tflin[N];} but Buckhardt
         * Makefile: Summary: 0.99r16          function has 14 parameters which makes the code unreadable and
           useless. Gegenfürtner used a lot of static variables or functions
 2018-05-02  Brouard Nicolas  <brouard@brouard.name>          which I tried to minimize. Also in Gegefürtner, array dimensions
           were fixed to N. In my adaptation the flin is static double
         * imach.c: Summary: Some bugs fixed          flin(double l, int j) and the parameter used are global variables.
   
 2018-05-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2023-06-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17          * imach.c (Module): Testing if conjugate gradient could be quicker
           when lot of variables POWELLORIGINCONJUGATE
 2018-05-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2023-05-23  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Some bugs fixed  
           * imach.c (Module): Fixed PROB_r 
 2018-05-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2023-05-22  Nicolas Brouard   <brouard@ined.fr>
         * imach.c:  
         Summary: Bug fixed by providing frequencies only for non missing covariates          * imach.c (Module): In the ILK....txt file, the number of columns
           before the covariates values is dependent of the number of states (16+nlstate): 0.99r46
 2018-04-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2023-05-08  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: some minor bugs  
           *  (Module): Error V0 when result:. and model 1+age+V1: fixed
 2018-04-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2023-04-29  Nicolas Brouard  <brouard@ined.fr>
         * README.txt: *** empty log message ***  
           * imach.c (Module): Inverting the model equation and fixingg bugs
         * imach.c: Summary: Some bugs fixed, valgrind tested          in the drawings
           "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
 2018-04-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2023-04-24  Nicolas Brouard  <brouard@ined.fr>
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  
           * imach.c (Module): some bugs in printinggnuplot 
         * imach.c:  
         Summary: Computing mean and stdeviation of fixed quantitative variables  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
   
 2018-04-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Version 0.99r42 needed a newer version of
           Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         * imach.c: Summary: Some minor bugs fixed          version 5.0 or 5.1 distributed with IMaCh.
   
         * version.h: *** empty log message ***  2022-09-18  Nicolas Brouard   <brouard@ined.fr>
   
 2018-02-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Fixing when a state in the data is 0 or higher
           than lstate+ndeath. Fixing the plot of contribution to Likelihood.
         * imach.c: *** empty log message ***  
   2022-09-16  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Adding second argument for quitting  
           * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
 2018-02-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-09-14  Nicolas Brouard   <brouard@ined.fr>
         * Makefile, README.txt, imach.c: Summary: 0.99r15  
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
   
 2017-07-20  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: temporary working          * imach.c (Module): Version 0.99r39 with colored dummy covariates
           (fixed or time varying), using new last columns of
 2017-07-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          ILK_parameter.txt file.
   
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)  2022-09-11  Nicolas Brouard   <brouard@ined.fr>
   
 2017-07-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Adding timevarying products of any kinds,
           should work before shifting cotvar from ncovcol+nqv columns in
         * imach.c: Summary: BOM files can be read now          order to have a correspondance between the column of cotvar and
           the id of column.
 2017-06-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          (Module): Some cleaning and adding covariates in ILK.txt
   
         * imach.c: Summary: Graphs improvements  2022-09-09  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Saito's color          * imach.c (Module): Many improvements for fixing products of fixed
           timevarying as well as fixed * fixed, and test with quantitative
 2017-06-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          covariate.
   
         * imach.c: Summary: Version 0.99r14  2022-09-04  Nicolas Brouard   <brouard@ined.fr>
   
 2017-06-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Now the easy runs i.e. without result or
           model=1+age only did not work. The defautl combination should be 1
         * imach.c: Summary: More documentation on projections          and not 0 because everything hasn't been tranformed yet.
   
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)  2022-09-02  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some bug with rint          * imach.c: Version 0.99r35 because it outputs same results with
           1+age+V1+V1*age for females and 1+age for females only
 2017-05-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          (education=1 noweight)
   
         * imach.c: *** empty log message ***  2022-08-31  Nicolas Brouard   <brouard@ined.fr>
   
 2017-05-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
   
         * imach.c: Summary: Code into subroutine, cleanings  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
   
 2017-05-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Version 0.99r33 A lot of changes in
           reassigning covariates: my first idea was that people will always
         * imach.c:          use the first covariate V1 into the model but in fact they are
         Summary: backprojection and confidence intervals of backprevalence          producing data with many covariates and can use an equation model
           with some of the covariate; it means that in a model V2+V3 instead
 2017-05-13  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          of codtabm(k,Tvaraff[j]) which calculates for combination k, for
           three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         * imach.c: Summary: temporary save for backprojection          the equation model is restricted to two variables only (V2, V3)
           and the combination for V2 should be codtabm(k,1) instead of
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)          (codtabm(k,2), and the code should be
           codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
 2017-04-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          made. All of these should be simplified once a day like we did in
           hpxij() for example by using precov[nres] which is computed in
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          decoderesult for each nres of each resultline. Loop should be done
           on the equation model globally by distinguishing only product with
         * imach.c: Summary: Labels in graphs          age (which are changing with age) and no more on type of
           covariates, single dummies, single covariates. 
 2017-04-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-08-06  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: to save  
           *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
 2017-04-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-08-03  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
 2017-04-05  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-07-25  Brouard Nicolas  <brouard@brouard.name>
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1  
           * imach.c (Module): Error cptcovn instead of nsd in bmij (was
 2017-04-04  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          coredumped, revealed by Feiuno, thank you.
   
         * imach.c: Summary: Gnuplot indexations fixed (humm)  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:          * r29 W and not sqrt(Wald)
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  
   2022-07-22  Nicolas Brouard   <brouard@ined.fr>
 2017-04-03  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
         * imach.c: Summary: Version 0.99r12  
         Some cleanings, conformed with updated documentation.  2022-06-02  Brouard Nicolas  <brouard@brouard.name>
   
 2017-03-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): Adding the Wald tests from the log to the main
           htm for better display of the maximum likelihood estimators.
         * version.h: *** empty log message ***  
   2022-05-30  Brouard Nicolas  <brouard@brouard.name>
         * version.h: Summary:0.99r11  
           * imach.c: With products of covariates (age or dummies or
 2017-03-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          quantitatives), estimates of parameters were good but when
           estimating variances the positions of newly created covariates
         * imach.c: Summary: Temp          were wrongly assigned and results were wrong. Thank to Feinua_Sun!
   
 2017-03-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2022-05-24  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Temporary          * imach.c (Module): Some attempts to find a bug of wrong estimates
           of confidencce intervals with product in the equation modelC
 2017-03-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-05-15  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed  
           * imach.c (Module):  Some minor improvements
         * imach.c: Summary: Fixing data parameter line  
   2022-04-13  Brouard Nicolas  <brouard@brouard.name>
 2016-12-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Adding link to text data files
         * imach.c: Summary: 0.99 in progress  
   2022-04-11  Nicolas Brouard   <brouard@ined.fr>
 2016-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
         * imach.c: *** empty log message ***  
   2022-04-05  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: not working  
           * imach.c (Module): Fixed covariates (dummy or quantitative)
 2016-09-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
         * imach.c: Summary: continue          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
 2016-09-07  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2022-03-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Starting values from frequencies  
           * 99r25 Improvements in fixing discrepancies between covariates
         * imach.c: *** empty log message ***          missing in result line but in model. 
   
 2016-09-02  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
         * imach.c: *** empty log message ***  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
 2016-08-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * ./ (Module): Fixed bug on result:
         * imach.c: Summary: Fixing a lots  
   *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
 2016-08-29  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c (Module): Fix bug on quitting after result lines!
         * imach.c: Summary: gnuplot problem in Back projection to fix          (Module): Version 0.99r21
   
         * imach.c: Summary: Better  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
   
 2016-08-26  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
   
         * imach.c:  
         Summary: Improvement in Powell output in order to copy and paste  2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Starting tests of 0.99          *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
   
         * imach.c: Summary: to valgrind  2020-02-22  Brouard Nicolas  <brouard@ined.fr>
   
 2016-08-25  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          *  (Module): imach.c Update mle=-3 (for computing Life expectancy
           and life table from the data without any state)
         * imach.c: *** empty log message ***  
   2019-05-20  Brouard Nicolas  <brouard@ined.fr>
 2016-08-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * version.h: Summary: version 0.99.r19
         * imach.c: *** empty log message ***  
           * imach.c: Summary: Projection syntax simplified
         * imach.c: Summary: not working          We can now start projections, forward or backward, from the mean date
           of inteviews up to or down to a number of years of projection:
 2016-08-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          prevforecast=1 yearsfproj=15.3 mobil_average=0
           or
         * imach.c: Summary: not working          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
           or
         * imach.c: Summary: Not working          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
 2016-07-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   
         * imach.c: Summary: Completing for func too  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: doxygen tex bug
   
         * imach.c: Summary: Fixing some arrays, still debugging  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
 2016-07-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: There was some wrong lines added
   
         * imach.c:  2019-05-09  Brouard Nicolas  <brouard@ined.fr>
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  
           * Makefile, imach.c: *** empty log message ***
 2016-07-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * ChangeLog: Summary: C=
         * imach.c: Summary: temp  
           * imach.c: Summary: Some updates
         * imach.c: Summary: saving but not running  
           * imach.c: Summary: Before ncovmax
 2016-07-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * version.h: *** empty log message ***
         * imach.c: Summary: Fixes  
           * imach.c: Summary: 0.99r18 unlimited number of individuals
 2016-02-19  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss, Makefile, version.h: *** empty log message ***          * imach.c: Summary: Bug for young ages (<-30) will be in r17
   
         * imach.c: Summary: temporary  2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   
 2016-02-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * Makefile: Summary: 0.99r16
   
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-02-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: Some bugs fixed
   
         * imach.c: Summary: minor bug  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99r2          * imach.c:  Summary: Bug for young ages (<-30) will be in r17
   
 2016-02-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Some bugs fixed
   
 2016-02-12  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2018-05-01  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.99 Back projections          * imach.c:
           Summary: Bug fixed by providing frequencies only for non missing covariates
 2015-12-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2018-04-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Experimental backcast  
           * imach.c: Summary: some minor bugs
 2015-12-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2018-04-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r4 Warning and status=-2  
           * README.txt: *** empty log message ***
         Version 0.98r4 is now:  
          - displaying an error when status is -1, date of interview unknown and date of death known;          * imach.c: Summary: Some bugs fixed, valgrind tested
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
 2015-12-16  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
         * Makefile: *** empty log message ***  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r4 working  
           * imach.c: Summary: Some minor bugs fixed
         * Makefile: Summary: linuxrpm added  
           * version.h: *** empty log message ***
         * Makefile: *** empty log message ***  
   2018-02-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: temporary not working  
           * imach.c: *** empty log message ***
 2015-12-11  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Adding second argument for quitting
         * imach.c: Summary: 0.98r4  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
 2015-12-08  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
         * Makefile: *** empty log message ***          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
 2015-11-21  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile:          * imach.c: Summary: temporary working
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  
   2017-07-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: minor typo  
           * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
   2017-07-17  Brouard Nicolas  <brouard@ined.fr>
         Author: Nicolas Brouard  
           * imach.c: Summary: BOM files can be read now
 2015-11-18  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-06-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Start working on projected prevalences  
           * imach.c: Summary: Graphs improvements
 2015-11-17  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: Saito's color
         * imach.c: Summary: Adding ftolpl parameter  
         Author: N Brouard  2017-06-29  Brouard Nicolas  <brouard@ined.fr>
   
         We had difficulties to get smoothed confidence intervals. It was due          * imach.c: Summary: Version 0.99r14
         to the period prevalence which wasn't computed accurately. The inner  
         parameter ftolpl is now an outer parameter of the .imach parameter  2017-06-27  Brouard Nicolas  <brouard@ined.fr>
         file after estepm. If ftolpl is small 1.e-4 and estepm too,  
         computation are long.          * imach.c: Summary: More documentation on projections
   
         * version.h: *** empty log message ***          * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
   
         * imach.c: Summary: temporary          * imach.c: Summary: Some bug with rint
   
 2015-10-27  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-05-24  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: *** empty log message ***
   
         * setup.iss.in: Summary: some new subdirs  2017-05-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c: Summary: Code into subroutine, cleanings
   
         * setup.iss.in:  2017-05-18  Brouard Nicolas  <brouard@ined.fr>
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  
           * imach.c:
 2015-10-24  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          Summary: backprojection and confidence intervals of backprevalence
   
         * imach.c: *** empty log message ***  2017-05-13  Brouard Nicolas  <brouard@ined.fr>
   
 2015-10-23  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          * imach.c: Summary: temporary save for backprojection
   
         * imach.c:          * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
         Summary: 0.98r3 some clarification for graphs on likelihood contributions  
   2017-04-26  Brouard Nicolas  <brouard@ined.fr>
 2015-10-01  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
         * imach.c: Summary: Some new graphs of contribution to likelihood  
           * imach.c: Summary: Labels in graphs
 2015-09-30  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  
   2017-04-24  Brouard Nicolas  <brouard@ined.fr>
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake          * imach.c: Summary: to save
   
         * imach.c: Summary: looking at better estimation of the hessian  2017-04-18  Brouard Nicolas  <brouard@ined.fr>
   
         Also a better criteria for convergence to the period prevalence And          * imach.c: *** empty log message ***
         therefore adding the number of years needed to converge. (The  
         prevalence in any alive state shold sum to one  2017-04-05  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile: *** empty log message ***          * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
   
 2015-09-22  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>  2017-04-04  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: Summary: Gnuplot indexations fixed (humm)
         Summary: Adding some overall graph on contribution to likelihood. Might change  
           * imach.c:
 2015-09-15  Brouard Nicolas  <brouard@brouard-antoine.homelinux.com>          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
   
         * Makefile: *** empty log message ***  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: 0.98r0          * imach.c: Summary: Version 0.99r12
           Some cleanings, conformed with updated documentation.
         - Some new graphs like suvival functions  
         - Some bugs fixed like model=1+age+V2.  2017-03-30  Brouard Nicolas  <brouard@ined.fr>
   
         * ChangeLog, Makefile: Summary: 0.98r0          * version.h: *** empty log message ***
   
         * CMakeLists.txt: Summary: Some tests for setup.iss          * version.h: Summary:0.99r11
   
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc          * imach.c: Summary: Temp
   
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>  2017-03-27  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.          * imach.c: Summary: Temporary
   
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>  2017-03-08  Brouard Nicolas  <brouard@ined.fr>
   
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
   
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>          * imach.c: Summary: Fixing data parameter line
   
         * imach.c (Module): Merging 1.61 to 1.162  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
   
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>          * imach.c: Summary: 0.99 in progress
   
         * prevlim.h (Module):  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
   
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>          * imach.c: *** empty log message ***
   
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...          * imach.c: Summary: not working
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
   2016-09-08  Brouard Nicolas  <brouard@ined.fr>
 2010-04-29  brouard  <brouard@ined.fr>  
           * imach.c: Summary: continue
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.  2016-09-07  Brouard Nicolas  <brouard@ined.fr>
   
 2010-04-26  brouard  <brouard@ined.fr>          * imach.c: Summary: Starting values from frequencies
   
         * imach.c (Module): merging some libgsl code. Fixing computation          * imach.c: *** empty log message ***
         of likelione (using inter/intrapolation if mle = 0) in order to  
         get same likelihood as if mle=1.  2016-09-02  Brouard Nicolas  <brouard@ined.fr>
         Some cleaning of code and comments added.  
           * imach.c: *** empty log message ***
 2009-10-29  brouard  <brouard@ined.fr>  
   2016-08-30  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  
           * imach.c: Summary: Fixing a lots
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
   2016-08-29  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Clarifications on computing e.j  
           * imach.c: Summary: gnuplot problem in Back projection to fix
 2006-04-28  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: Better
         * imach.c (Module): Yes the sum of survivors was wrong since  
         imach-114 because nhstepm was no more computed in the age  2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         loop. Now we define nhstepma in the age loop.  
         (Module): In order to speed up (in case of numerous covariates) we          * imach.c:
         compute health expectancies (without variances) in a first step          Summary: Improvement in Powell output in order to copy and paste
         and then all the health expectancies with variances or standard  
         deviation (needs data from the Hessian matrices) which slows the          * imach.c: Summary: Starting tests of 0.99
         computation.  
         In the future we should be able to stop the program is only health          * imach.c: Summary: to valgrind
         expectancies and graph are needed without standard deviations.  
   2016-08-25  Brouard Nicolas  <brouard@ined.fr>
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: *** empty log message ***
         * imach.iss (Module):  
   2016-08-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): bugs in evsi + population file added in htm output file  
           * imach.c: *** empty log message ***
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: Summary: not working
         * imach.c (Module):  
   2016-08-22  Brouard Nicolas  <brouard@ined.fr>
 2006-03-20  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: not working
         * imach.c (Module): <title> changed, corresponds to .htm file  
         name. <head> headers where missing.          * imach.c: Summary: Not working
   
         * Makefile (Module): 0.98g  2016-07-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Weights can have a decimal point as for          * imach.c: Summary: Completing for func too
         English (a comma might work with a correct LC_NUMERIC environment,  
         otherwise the weight is truncated).  2016-07-22  Brouard Nicolas  <brouard@ined.fr>
         Modification of warning when the covariates values are not 0 or  
         1.          * imach.c: Summary: Fixing some arrays, still debugging
         Version 0.98g  
   2016-07-21  Brouard Nicolas  <brouard@ined.fr>
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c:
         * imach.c (Module): Comments concerning covariates added          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
   
         * noreg-setup.iss (Module): Version 0.98f  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup          * imach.c: Summary: temp
   
         * imach.c (Module): refinements in the computation of lli if          * imach.c: Summary: saving but not running
         status=-2 in order to have more reliable computation if stepm is  
         not 1 month. Version 0.98f  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
   
 2006-03-15  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: Fixes
   
         * imach.c (Module): Bug if status = -2, the loglikelihood was  2016-02-19  Brouard Nicolas  <brouard@ined.fr>
         computed as likelihood omitting the logarithm. Version O.98e  
           * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
           * setup.iss, Makefile, version.h: *** empty log message ***
         * imach.c (Module): varevsij Comments added explaining the second  
         table of variances if popbased=1 .          * imach.c: Summary: temporary
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  
         (Module): Function pstamp added  2016-02-17  Brouard Nicolas  <brouard@ined.fr>
         (Module): Version 0.98d  
           * imach.c: Summary: Probably last 0.98 stable version 0.98r6
 2006-03-06  Brouard Nicolas  <brouard@localhost>  
   2016-02-16  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Variance-covariance wrong links and  
         varian-covariance of ej. is needed (Saito).          * imach.c: Summary: minor bug
   
 2006-02-27  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: 0.99r2
   
         * imach.c (Module): One freematrix added in mlikeli!  2016-02-15  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-26  Brouard Nicolas  <brouard@localhost>          * imach.c: *** empty log message ***
   
         * imach.c (Module): Some improvements in processing parameter  2016-02-12  Brouard Nicolas  <brouard@ined.fr>
         filename with strsep.  
           * imach.c: Summary: 0.99 Back projections
 2006-02-24  Brouard Nicolas  <brouard@localhost>  
   2015-12-23  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Memory leaks checks with valgrind and:  
         datafile was not closed, some imatrix were not freed and on matrix          * imach.c: Summary: Experimental backcast
         allocation too.  
   2015-12-18  Brouard Nicolas  <brouard@ined.fr>
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: Summary: 0.98r4 Warning and status=-2
         * strsep.c (Module): Inclusion because not in mingw32!!!  
           Version 0.98r4 is now:
         * setup.iss.in (Module): IMACHSETUPVERSION added           - displaying an error when status is -1, date of interview unknown and date of death known;
            - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         * noreg-setup.iss (Module): added to cvs tree          Older changes concerning s=-2, dating from 2005 have been supersed.
   
         * Makefile (Module): IMACHSETUPVERSION added          * Makefile: *** empty log message ***
   
 2006-01-30  BROUARD Nicolas  <brouard@localhost>  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module, Module): Latest Makefile          * Makefile: *** empty log message ***
   
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe          * imach.c: Summary: 0.98r4 working
   
 2006-01-27  BROUARD Nicolas  <brouard@localhost>          * Makefile: Summary: linuxrpm added
   
         * noreg-setup.iss (Module): ADDED          * Makefile: *** empty log message ***
   
 2006-01-24  BROUARD Nicolas  <brouard@localhost>          * imach.c: Summary: temporary not working
   
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>          * imach.c: Summary: 0.98r4
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
   
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X          * Makefile: *** empty log message ***
   
 2005-09-30    <lievre@PC_00595>  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.          * Makefile:
         (Module): If the status is missing at the last wave but we know          Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         that the person is alive, then we can code his/her status as -2  
         (instead of missing=-1 in earlier versions) and his/her          * imach.c: Summary: minor typo
         contributions to the likelihood is 1 - Prob of dying from last  
         health status (= 1-p13= p11+p12 in the easiest case of somebody in          * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
         the healthy state at last known wave). Version is 0.98  
           Author: Nicolas Brouard
 2004-05-20  Brouard Nicolas  <brouard@localhost>  
   2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Repository):  
         Agnes added a direct estimation of mortality (without the need of          * imach.c: Summary: Start working on projected prevalences
         computing period prevalence and differential mortality). Thus here  
         is version 0.97a which has been distributed to some people at  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  
         mortality using covariates is not done today. Estimating direct          * imach.c: Summary: Adding ftolpl parameter
         mortality is a very different process because it doesn't need          Author: N Brouard
         interpolation because it is easy to get the lx from the force of  
         the mortality mux in the simplest case as for a Gompertz (log mux          We had difficulties to get smoothed confidence intervals. It was due
         = a + b*x . But we have been able to incorporate the new code          to the period prevalence which wasn't computed accurately. The inner
         within former imach program (0.96d) without deteriorating too much          parameter ftolpl is now an outer parameter of the .imach parameter
         the understanding of the program.          file after estepm. If ftolpl is small 1.e-4 and estepm too,
           computation are long.
 2003-06-25    <brouard@BROUARD>  
           * version.h: *** empty log message ***
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  
         exist so I changed back to asctime which exists.          * imach.c: Summary: temporary
         (Module): Version 0.96b  
   2015-10-27  Brouard Nicolas  <brouard@ined.fr>
 2003-06-24    <brouard@BROUARD>  
           * Makefile: *** empty log message ***
         * imach.c (Module): Some bugs corrected for windows. Also, when  
         mle=-1 a template is output in file "or"mypar.txt with the design          * setup.iss.in: Summary: some new subdirs
         of the covariance matrix to be input.  
           * imach.c: *** empty log message ***
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  
           * setup.iss.in:
         * imach.c (Repository): Duplicated warning errors corrected.          Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         (Repository): Elapsed time after each iteration is now output. It  
         helps to forecast when convergence will be reached. Elapsed time  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
         is stamped in powell.  We created a new html file for the graphs  
         concerning matrix of covariance. It has extension -cov.htm.          * imach.c: *** empty log message ***
   
 2003-06-23  Brouard Nicolas  <brouard@homebrou>  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.          * imach.c:
           Summary: 0.98r3 some clarification for graphs on likelihood contributions
 2003-06-18  Brouard Nicolas  <brouard@homebrou>  
   2015-10-01  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  
           * imach.c: Summary: Some new graphs of contribution to likelihood
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  
   2015-09-30  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Repository): Check when date of death was earlier that          * Makefile:
         current date of interview. It may happen when the death was just          Summary: Version read from version.h, itself read with cmake
         prior to the death. In this case, dh was negative and likelihood  
         was wrong (infinity). We still send an "Error" but patch by          * imach.c: Summary: looking at better estimation of the hessian
         assuming that the date of death was just one stepm after the  
         interview.          Also a better criteria for convergence to the period prevalence And
         (Repository): Because some people have very long ID (first column)          therefore adding the number of years needed to converge. (The
         we changed int to long in num[] and we added a new lvector for          prevalence in any alive state shold sum to one
         memory allocation. But we also truncated to 8 characters (left  
         truncation)          * Makefile: *** empty log message ***
   
         (Repository): No more line truncation errors.  2015-09-22  Brouard Nicolas  <brouard@ined.fr>
   
 2003-06-14  Brouard Nicolas  <brouard@homebrou>          * imach.c:
           Summary: Adding some overall graph on contribution to likelihood. Might change
         * imach.c (Repository): Add of a routine likelione (likelihood  
         only once) which prints on a text file  2015-09-15  Brouard Nicolas  <brouard@ined.fr>
         (ilk) the contributions to the likelihood for each  
         individual/wave.          * Makefile: *** empty log message ***
   
 2003-06-13  Brouard Nicolas  <brouard@homebrou>          * imach.c: Summary: 0.98r0
         * imach.c (Repository): Replace "freqsummary" at a correct  
         place. It differs from routine "prevalence" which may be called          - Some new graphs like survival functions
         many times. Probs is memory consuming and must be used with          - Some bugs fixed like model=1+age+V2.
         parcimony.  
           * ChangeLog, Makefile: Summary: 0.98r0
 2003-06-17    <brouard@BROUARD>  
           * CMakeLists.txt: Summary: Some tests for setup.iss
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
 2003-05-16  Brouard Nicolas  <brouard@brouard>          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
         * imach.c (Module): Insert of a warning if the delay between two  
         waves is negative.  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
   
         * imach.c (Module):          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
   
 2003-05-03    <brouard@BROUARD>  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
         * imach.c: Some cleaning          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
   
 2003-03-28    <brouard@BROUARD>  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
         * imach.c (Module): In version up to 0.92 likelihood was computed  
         as if date of death was unknown. Death was treated as any other          * imach.c (Module): Merging 1.61 to 1.162
         health state: the date of the interview describes the actual state  
         and not the date of a change in health state. The former idea was  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         to consider that at each interview the state was recorded  
         (healthy, disable or death) and IMaCh was corrected; but when we          * prevlim.h (Module): 
         introduced the exact date of death then we should have modified  
         the contribution of an exact death to the likelihood. This new  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
         contribution is smaller and very dependent of the step unit  
         stepm. It is no more the probability to die between last interview          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
         and month of death but the probability to survive from last          (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
         interview up to one month before death multiplied by the  
         probability to die within a month. Thanks to Chris  2010-04-29  brouard  <brouard@ined.fr>
         Jackson for correcting this bug.  Former versions increased  
         mortality artificially. The bad side is that we add another loop          * imach.c (Module): Checking covariates for more complex models
           than V1+V2. A lot of change to be done. Unstable.
   
         which slows down the processing. The difference can be up to 10%  2010-04-26  brouard  <brouard@ined.fr>
   
           * imach.c (Module): merging some libgsl code. Fixing computation
         lower mortality.          of likelione (using inter/intrapolation if mle = 0) in order to
           get same likelihood as if mle=1.
           Some cleaning of code and comments added.
   
   2009-10-29  brouard  <brouard@ined.fr>
   
 2002-05-30    <brouard@BROUARD>          * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
   
   2006-06-30  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Clarifications on computing e.j
   
         *  2006-04-28  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Yes the sum of survivors was wrong since
           imach-114 because nhstepm was no more computed in the age
           loop. Now we define nhstepma in the age loop.
           (Module): In order to speed up (in case of numerous covariates) we
         * imach.c (Module): Add correlation matrix of one-step          compute health expectancies (without variances) in a first step
           and then all the health expectancies with variances or standard
           deviation (needs data from the Hessian matrices) which slows the
         probabilities and covariance matrix          computation.
           In the future we should be able to stop the program is only health
           expectancies and graph are needed without standard deviations.
   
   2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.iss (Module): 
   
           * imach.c (Module): bugs in evsi + population file added in htm output file
   
   2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.c (Module): 
   
   2006-03-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): <title> changed, corresponds to .htm file
           name. <head> headers where missing.
   
           * Makefile (Module): 0.98g
   
           * imach.c (Module): Weights can have a decimal point as for
           English (a comma might work with a correct LC_NUMERIC environment,
           otherwise the weight is truncated).
           Modification of warning when the covariates values are not 0 or
           1. 
           Version 0.98g
   
   2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.c (Module): Comments concerning covariates added
   
           * noreg-setup.iss (Module): Version 0.98f
   
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
   
           * imach.c (Module): refinements in the computation of lli if
           status=-2 in order to have more reliable computation if stepm is
           not 1 month. Version 0.98f
   
   2006-03-15  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Bug if status = -2, the loglikelihood was
           computed as likelihood omitting the logarithm. Version O.98e
   
   2006-03-14  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): varevsij Comments added explaining the second
           table of variances if popbased=1 .
           (Module): Covariances of eij, ekl added, graphs fixed, new html link.
           (Module): Function pstamp added
           (Module): Version 0.98d 
   
   2006-03-06  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Variance-covariance wrong links and
           varian-covariance of ej. is needed (Saito).
   
   2006-02-27  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): One freematrix added in mlikeli!
   
   2006-02-26  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
   
   2006-02-24  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
   
   2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
   
           * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   

Removed from v.1.41  
changed lines
  Added in v.1.69


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