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version 1.45, 2021/03/31 14:11:04 version 1.72, 2024/07/02 09:16:53
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 2021-03-31  Nicolas Brouard   <brouard@ined.fr>  2024-07-02  Nicolas Brouard  <brouard@ined.fr>
   
         * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett          * imach.c (Module): Trying compiling on Linux with clang (instead
           of gcc which is too slow) and lot of warnings suppressed
 2021-03-08  Nicolas Brouard   <brouard@ined.fr>  
   2024-06-28  Nicolas Brouard  <brouard@ined.fr>
         * ./ (Module): Fixed bug on result:  
           * imach.c (Module): s6 errors with age*age (harmless).
 2021-02-20  Nicolas Brouard   <brouard@ined.fr>  
   2024-05-12  Nicolas Brouard   <brouard@ined.fr>
         * imach.c (Module): Fix bug on quitting after result lines!  
         (Module): Version 0.99r21          * imach.c Version 0.99s5 In fact, the covariance of total life
           expectancy e.. with a partial life expectancy e.j is high,
 2021-02-12  Nicolas Brouard   <brouard@ined.fr>          therefore the complete matrix of variance covariance has to be
           included in the formula of the standard error of the proportion of
         * imach.c (Module): The use of a Windows BOM (huge) file is now an error          total life expectancy spent in a specific state:
           var(X/Y)=mu_x^2/mu_y^2*(sigma_x^2/mu_x^2 -2
           sigma_xy/mu_x/mu_y+sigma^2/mu_y^2).  Also an error with mle=-3
 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>          made the program core dump. It is fixed in this version.
   
         *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.  2024-04-30  Nicolas Brouard   <brouard@ined.fr>
   
 2020-02-22  Brouard Nicolas  <brouard@ined.fr>          * (Module): In version 0.99s4, we incorporated the calculation of
           the std error of the proportion of total life expectancy spent in
         *  (Module): imach.c Update mle=-3 (for computing Life expectancy          a specific state Var(e.j/e..) using the formula of Var(X/Y)
         and life table from the data without any state)          depending only of the variances of X and Y and expectancies.
   
 2019-05-20  Brouard Nicolas  <brouard@ined.fr>  2024-04-24  Nicolas Brouard   <brouard@ined.fr>
   
         * version.h: Summary: version 0.99.r19          * (Module): This version comes late after having tested
           successfully the praxis C version of Buckhardt.  But Buckardt's
         * imach.c: Summary: Projection syntax simplified          version was difficult to read and Gegenfurtner's version had a few
         We can now start projections, forward or backward, from the mean date          typos which made its results less reliable than Buckhardt's
         of inteviews up to or down to a number of years of projection:          results.  The most important work consisted in retyping the Brent
         prevforecast=1 yearsfproj=15.3 mobil_average=0          original PRAXIS program written in Algol W (published with errors,
         or          ommitting the transposition of matrix V before its QR reduction
         prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0          from Golub. I used the recent "awe" compiler from Gkynn Webster.
         or          The awe library had errors, for example in arc tangent function
         prevbackcast=1 yearsbproj=12.3 mobil_average=1          which have been fixed.
         or  
         prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1          The main objective was to get identical results with the three
           versions: (1) Algol W, (2) Buckhardt'C version as well (3)
 2019-05-18  Brouard Nicolas  <brouard@ined.fr>          Gegenfürtner C versions on the various test functions published by
           Brent in 1973 in Algol W.
         * imach.c: Summary: doxygen tex bug  
           Also, in order to compare them, the random function had to produce
 2019-05-16  Brouard Nicolas  <brouard@ined.fr>          the same sequence for the 3 softwares. The random function used in
           imach corresponds to original Brent's random function written in
         * imach.c: Summary: There was some wrong lines added          Algol W.  Other point, in Algol W, the arrays of dimension n are
           'normal' mathematical arrays starting from 1 to n. But this is a
 2019-05-09  Brouard Nicolas  <brouard@ined.fr>          real issue in C where, by default, arrays are starting from 0 to
           n-1. In Buckhardt, as well as in Gegenfürtner C code, it can be
         * Makefile, imach.c: *** empty log message ***          seen that authors while trying to mimick original Brent Algol W
           code are hesitating by changing either a loop originally from 1 to
         * ChangeLog: Summary: C=          n in a loop from 0 to n-1, or keeping Brent's loop from 1 to n and
           shifting the index from original X(I) in Algol W to x[i-1] in C.
         * imach.c: Summary: Some updates          But as IMaCh is using, since the beginning, the Numerical Recipes
           functions vector or matrix, I changed Geggenfürtner code to mimick
         * imach.c: Summary: Before ncovmax          the original Algol W arrays. Thus the X(I) is translated in C as
           x[i] which minimizes the errors. The Golub QR algorithm was
         * version.h: *** empty log message ***          published in Algol with overflow errors which were reproduced in
           Brent's Algol W code. Buckhardt code fixed these errors which are
         * imach.c: Summary: 0.99r18 unlimited number of individuals          much more problematic in C than in Algol W.  Thus Buckhardt code
         The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.          seems very safe, but i haven't chosen it for IMaCh because the C
           style is horrible and almost unreadable compared to Gegenfürtner
 2018-12-13  Brouard Nicolas  <brouard@ined.fr>          CO code which is very close to Brent's original. Also what makes
           Buckhardt code more difficult to read is, instead of passing the
         * imach.c: Summary: Bug for young ages (<-30) will be in r17          minimum of parameters in the functions calls, as it is in Algol
           Brent's code or Gegenfürtner's code, the list of parameters is
 2018-12-05  Brouard Nicolas  <brouard@ined.fr>          high. For example, the flin function LONG REAL PROCEDURE FLIN
           (LONG REAL VALUE L) has only one parameter in Algol W, the
         * Makefile: Summary: 0.99r16          Gegenfürtner flin function had two parameters: static double
           flin(l, j) double l; { int i; double tflin[N];} but Buckhardt
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          function has 14 parameters which makes the code unreadable and
           useless. Gegenfürtner used a lot of static variables or functions
         * imach.c: Summary: Some bugs fixed          which I tried to minimize. Also in Gegefürtner, array dimensions
           were fixed to N. In my adaptation the flin is static double
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          flin(double l, int j) and the parameter used are global variables.
   
         * imach.c:  Summary: Bug for young ages (<-30) will be in r17  2023-06-14  Nicolas Brouard   <brouard@ined.fr>
   
 2018-05-02  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Testing if conjugate gradient could be quicker
           when lot of variables POWELLORIGINCONJUGATE
         * imach.c: Summary: Some bugs fixed  
   2023-05-23  Nicolas Brouard   <brouard@ined.fr>
 2018-05-01  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Fixed PROB_r 
         * imach.c:  
         Summary: Bug fixed by providing frequencies only for non missing covariates  2023-05-22  Nicolas Brouard   <brouard@ined.fr>
   
 2018-04-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): In the ILK....txt file, the number of columns
           before the covariates values is dependent of the number of states (16+nlstate): 0.99r46
         * imach.c: Summary: some minor bugs  
   2023-05-08  Nicolas Brouard   <brouard@ined.fr>
 2018-04-21  Brouard Nicolas  <brouard@ined.fr>  
           *  (Module): Error V0 when result:. and model 1+age+V1: fixed
         * README.txt: *** empty log message ***  
   2023-04-29  Nicolas Brouard  <brouard@ined.fr>
         * imach.c: Summary: Some bugs fixed, valgrind tested  
           * imach.c (Module): Inverting the model equation and fixingg bugs
 2018-04-20  Brouard Nicolas  <brouard@ined.fr>          in the drawings
           "1+age+V7*V4*age+V6*V4*age+V7*V3*age+V6*V3*age+V6*V2*age+V7*age+V6*age+V4*age+V3*age+V2*age+V7*V4+V6*V4+V7*V3+V6*V3+V7*V2+V6*V2+V7+V6+V4+V3+V2\000\0003+V2"
         * Makefile, README.txt, setup.iss: Summary: imach 0.99r16  
   2023-04-24  Nicolas Brouard  <brouard@ined.fr>
         * imach.c:  
         Summary: Computing mean and stdeviation of fixed quantitative variables          * imach.c (Module): some bugs in printinggnuplot 
   
 2018-04-19  Brouard Nicolas  <brouard@ined.fr>  2022-09-19  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Some minor bugs fixed          * imach.c (Module): Version 0.99r42 needed a newer version of
           Gnuplot. But newer version 0.99r43 should run with the Gnuplot
         * version.h: *** empty log message ***          version 5.0 or 5.1 distributed with IMaCh.
   
 2018-02-27  Brouard Nicolas  <brouard@ined.fr>  2022-09-18  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          * imach.c (Module): Fixing when a state in the data is 0 or higher
           than lstate+ndeath. Fixing the plot of contribution to Likelihood.
         * imach.c: Summary: Adding second argument for quitting  
   2022-09-16  Nicolas Brouard   <brouard@ined.fr>
 2018-02-21  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): 0.99r41 Was an error when product of timevarying and fixed. Using FixedV[of name] now. Thank you  Feinuo
         * Makefile, README.txt, imach.c: Summary: 0.99r15  
         New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
 2017-07-20  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Fixing names of variables in T_ (thanks to Feinuo)
   
         * imach.c: Summary: temporary working  2022-09-14  Nicolas Brouard   <brouard@ined.fr>
   
 2017-07-19  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Version 0.99r39 with colored dummy covariates
           (fixed or time varying), using new last columns of
         * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)          ILK_parameter.txt file.
   
 2017-07-17  Brouard Nicolas  <brouard@ined.fr>  2022-09-11  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: BOM files can be read now          * imach.c (Module): Adding timevarying products of any kinds,
           should work before shifting cotvar from ncovcol+nqv columns in
 2017-06-30  Brouard Nicolas  <brouard@ined.fr>          order to have a correspondance between the column of cotvar and
           the id of column.
         * imach.c: Summary: Graphs improvements          (Module): Some cleaning and adding covariates in ILK.txt
   
         * imach.c: Summary: Saito's color  2022-09-09  Nicolas Brouard   <brouard@ined.fr>
   
 2017-06-29  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Many improvements for fixing products of fixed
           timevarying as well as fixed * fixed, and test with quantitative
         * imach.c: Summary: Version 0.99r14          covariate.
   
 2017-06-27  Brouard Nicolas  <brouard@ined.fr>  2022-09-04  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: More documentation on projections          * imach.c (Module): Now the easy runs i.e. without result or
           model=1+age only did not work. The defautl combination should be 1
         * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)          and not 0 because everything hasn't been tranformed yet.
   
         * imach.c: Summary: Some bug with rint  2022-09-02  Nicolas Brouard   <brouard@ined.fr>
   
 2017-05-24  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Version 0.99r35 because it outputs same results with
           1+age+V1+V1*age for females and 1+age for females only
         * imach.c: *** empty log message ***          (education=1 noweight)
   
 2017-05-23  Brouard Nicolas  <brouard@ined.fr>  2022-08-31  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: Code into subroutine, cleanings          * imach.c (Module): Some improvments in fichtm and many verifications 0.99r34
   
 2017-05-18  Brouard Nicolas  <brouard@ined.fr>  2022-08-21  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:          * imach.c (Module): Version 0.99r33 A lot of changes in
         Summary: backprojection and confidence intervals of backprevalence          reassigning covariates: my first idea was that people will always
           use the first covariate V1 into the model but in fact they are
 2017-05-13  Brouard Nicolas  <brouard@ined.fr>          producing data with many covariates and can use an equation model
           with some of the covariate; it means that in a model V2+V3 instead
         * imach.c: Summary: temporary save for backprojection          of codtabm(k,Tvaraff[j]) which calculates for combination k, for
           three covariates (V1, V2, V3) the value of Tvaraff[j], but in fact
         * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)          the equation model is restricted to two variables only (V2, V3)
           and the combination for V2 should be codtabm(k,1) instead of
 2017-04-26  Brouard Nicolas  <brouard@ined.fr>          (codtabm(k,2), and the code should be
           codtabm(k,TnsdVar[Tvaraff[j]]. Many many changes have been
         * imach.c: Summary: imach 0.99r13 Some bugs fixed          made. All of these should be simplified once a day like we did in
           hpxij() for example by using precov[nres] which is computed in
         * imach.c: Summary: Labels in graphs          decoderesult for each nres of each resultline. Loop should be done
           on the equation model globally by distinguishing only product with
 2017-04-24  Brouard Nicolas  <brouard@ined.fr>          age (which are changing with age) and no more on type of
           covariates, single dummies, single covariates. 
         * imach.c: Summary: to save  
   2022-08-06  Nicolas Brouard   <brouard@ined.fr>
 2017-04-18  Brouard Nicolas  <brouard@ined.fr>  
           *  imach.c (Module): Version of imach using partly decoderesult to rebuild xpxij function
         * imach.c: *** empty log message ***  
   2022-08-03  Nicolas Brouard   <brouard@ined.fr>
 2017-04-05  Brouard Nicolas  <brouard@ined.fr>  
           *  imach.c (Module): Many errors in graphs fixed with Vn*age covariates.
         * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1  
   2022-07-25  Brouard Nicolas  <brouard@brouard.name>
 2017-04-04  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Error cptcovn instead of nsd in bmij (was
         * imach.c: Summary: Gnuplot indexations fixed (humm)          coredumped, revealed by Feiuno, thank you.
   
         * imach.c:  2022-07-23  Nicolas Brouard   <brouard@ined.fr>
         Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3  
           * r29 W and not sqrt(Wald)
 2017-04-03  Brouard Nicolas  <brouard@ined.fr>  
   2022-07-22  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Version 0.99r12  
         Some cleanings, conformed with updated documentation.          *  imach.c (Module): Output of Wald test in the htm file and not only in the log. 
   
 2017-03-30  Brouard Nicolas  <brouard@ined.fr>  2022-06-02  Brouard Nicolas  <brouard@brouard.name>
   
         * version.h: *** empty log message ***          * imach.c (Module): Adding the Wald tests from the log to the main
           htm for better display of the maximum likelihood estimators.
         * version.h: Summary:0.99r11  
   2022-05-30  Brouard Nicolas  <brouard@brouard.name>
 2017-03-29  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: With products of covariates (age or dummies or
         * imach.c: Summary: Temp          quantitatives), estimates of parameters were good but when
           estimating variances the positions of newly created covariates
 2017-03-27  Brouard Nicolas  <brouard@ined.fr>          were wrongly assigned and results were wrong. Thank to Feinua_Sun!
   
         * imach.c: Summary: Temporary  2022-05-24  Nicolas Brouard   <brouard@ined.fr>
   
 2017-03-08  Brouard Nicolas  <brouard@ined.fr>          * imach.c (Module): Some attempts to find a bug of wrong estimates
           of confidencce intervals with product in the equation modelC
         * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed  
   2022-05-15  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Fixing data parameter line  
           * imach.c (Module):  Some minor improvements
 2016-12-15  Brouard Nicolas  <brouard@ined.fr>  
   2022-04-13  Brouard Nicolas  <brouard@brouard.name>
         * imach.c: Summary: 0.99 in progress  
           * imach.c (Module): Adding link to text data files
 2016-09-15  Brouard Nicolas  <brouard@ined.fr>  
   2022-04-11  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed
         * imach.c: Summary: not working  
   2022-04-05  Brouard Nicolas  <brouard@ined.fr>
 2016-09-08  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c (Module): Fixed covariates (dummy or quantitative)
         * imach.c: Summary: continue          with missing values have never been allowed but are ERRORS and
           program quits. Standard deviations of fixed covariates were
 2016-09-07  Brouard Nicolas  <brouard@ined.fr>          wrongly computed. Mean and standard deviations of time varying
           covariates are still not computed.
         * imach.c: Summary: Starting values from frequencies  
   2022-03-17  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * 99r25 Improvements in fixing discrepancies between covariates
 2016-09-02  Brouard Nicolas  <brouard@ined.fr>          missing in result line but in model. 
   
         * imach.c: *** empty log message ***  *Wed Mar 31 2021  Nicolas Brouard   <brouard@ined.fr>
           * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett
 2016-08-30  Brouard Nicolas  <brouard@ined.fr>  
   *2021-03-08  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: Fixing a lots  
           * ./ (Module): Fixed bug on result:
 2016-08-29  Brouard Nicolas  <brouard@ined.fr>  
   *2021-02-20  Nicolas Brouard   <brouard@ined.fr>
         * imach.c: Summary: gnuplot problem in Back projection to fix  
           * imach.c (Module): Fix bug on quitting after result lines!
         * imach.c: Summary: Better          (Module): Version 0.99r21
   
 2016-08-26  Brouard Nicolas  <brouard@ined.fr>  2021-02-12  Nicolas Brouard   <brouard@ined.fr>
   
         * imach.c:          * imach.c (Module): The use of a Windows BOM (huge) file is now an error
         Summary: Improvement in Powell output in order to copy and paste  
   
         * imach.c: Summary: Starting tests of 0.99  2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
   
         * imach.c: Summary: to valgrind          *  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
   
 2016-08-25  Brouard Nicolas  <brouard@ined.fr>  2020-02-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: *** empty log message ***          *  (Module): imach.c Update mle=-3 (for computing Life expectancy
           and life table from the data without any state)
 2016-08-23  Brouard Nicolas  <brouard@ined.fr>  
   2019-05-20  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: *** empty log message ***  
           * version.h: Summary: version 0.99.r19
         * imach.c: Summary: not working  
           * imach.c: Summary: Projection syntax simplified
 2016-08-22  Brouard Nicolas  <brouard@ined.fr>          We can now start projections, forward or backward, from the mean date
           of inteviews up to or down to a number of years of projection:
         * imach.c: Summary: not working          prevforecast=1 yearsfproj=15.3 mobil_average=0
           or
         * imach.c: Summary: Not working          prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
           or
 2016-07-23  Brouard Nicolas  <brouard@ined.fr>          prevbackcast=1 yearsbproj=12.3 mobil_average=1
           or
         * imach.c: Summary: Completing for func too          prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   
 2016-07-22  Brouard Nicolas  <brouard@ined.fr>  2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Fixing some arrays, still debugging          * imach.c: Summary: doxygen tex bug
   
 2016-07-21  Brouard Nicolas  <brouard@ined.fr>  2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: Summary: There was some wrong lines added
         Summary: 0.99 working (more or less) for Asian Workshop on multitate methods  
   2019-05-09  Brouard Nicolas  <brouard@ined.fr>
 2016-07-12  Brouard Nicolas  <brouard@ined.fr>  
           * Makefile, imach.c: *** empty log message ***
         * imach.c: Summary: temp  
           * ChangeLog: Summary: C=
         * imach.c: Summary: saving but not running  
           * imach.c: Summary: Some updates
 2016-07-01  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Before ncovmax
         * imach.c: Summary: Fixes  
           * version.h: *** empty log message ***
 2016-02-19  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: 0.99r18 unlimited number of individuals
         * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7          The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   
         * setup.iss, Makefile, version.h: *** empty log message ***  2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: temporary          * imach.c: Summary: Bug for young ages (<-30) will be in r17
   
 2016-02-17  Brouard Nicolas  <brouard@ined.fr>  2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: Probably last 0.98 stable version 0.98r6          * Makefile: Summary: 0.99r16
   
 2016-02-16  Brouard Nicolas  <brouard@ined.fr>  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: minor bug          * imach.c: Summary: Some bugs fixed
   
         * imach.c: Summary: 0.99r2  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-02-15  Brouard Nicolas  <brouard@ined.fr>          * imach.c:  Summary: Bug for young ages (<-30) will be in r17
   
         * imach.c: *** empty log message ***  2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   
 2016-02-12  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bugs fixed
   
         * imach.c: Summary: 0.99 Back projections  2018-05-01  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-23  Brouard Nicolas  <brouard@ined.fr>          * imach.c:
           Summary: Bug fixed by providing frequencies only for non missing covariates
         * imach.c: Summary: Experimental backcast  
   2018-04-27  Brouard Nicolas  <brouard@ined.fr>
 2015-12-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: some minor bugs
         * imach.c: Summary: 0.98r4 Warning and status=-2  
   2018-04-21  Brouard Nicolas  <brouard@ined.fr>
         Version 0.98r4 is now:  
          - displaying an error when status is -1, date of interview unknown and date of death known;          * README.txt: *** empty log message ***
          - permitting a status -2 when the vital status is unknown at a known date of right truncation.  
         Older changes concerning s=-2, dating from 2005 have been supersed.          * imach.c: Summary: Some bugs fixed, valgrind tested
   
         * Makefile: *** empty log message ***  2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   
 2015-12-16  Brouard Nicolas  <brouard@ined.fr>          * Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   
         * Makefile: *** empty log message ***          * imach.c:
           Summary: Computing mean and stdeviation of fixed quantitative variables
         * imach.c: Summary: 0.98r4 working  
   2018-04-19  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: Summary: linuxrpm added  
           * imach.c: Summary: Some minor bugs fixed
         * Makefile: *** empty log message ***  
           * version.h: *** empty log message ***
         * imach.c: Summary: temporary not working  
   2018-02-27  Brouard Nicolas  <brouard@ined.fr>
 2015-12-11  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c: Summary: 0.98r4  
           * imach.c: Summary: Adding second argument for quitting
 2015-12-08  Brouard Nicolas  <brouard@ined.fr>  
   2018-02-21  Brouard Nicolas  <brouard@ined.fr>
         * Makefile: *** empty log message ***  
           * Makefile, README.txt, imach.c: Summary: 0.99r15
 2015-11-21  Brouard Nicolas  <brouard@ined.fr>          New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
   
         * Makefile:  2017-07-20  Brouard Nicolas  <brouard@ined.fr>
         Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more  
           * imach.c: Summary: temporary working
         * imach.c: Summary: minor typo  
   2017-07-19  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional  
           * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
         Author: Nicolas Brouard  
   2017-07-17  Brouard Nicolas  <brouard@ined.fr>
 2015-11-18  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: BOM files can be read now
         * imach.c: Summary: Start working on projected prevalences  
   2017-06-30  Brouard Nicolas  <brouard@ined.fr>
 2015-11-17  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Graphs improvements
         * imach.c: Summary: Adding ftolpl parameter  
         Author: N Brouard          * imach.c: Summary: Saito's color
   
         We had difficulties to get smoothed confidence intervals. It was due  2017-06-29  Brouard Nicolas  <brouard@ined.fr>
         to the period prevalence which wasn't computed accurately. The inner  
         parameter ftolpl is now an outer parameter of the .imach parameter          * imach.c: Summary: Version 0.99r14
         file after estepm. If ftolpl is small 1.e-4 and estepm too,  
         computation are long.  2017-06-27  Brouard Nicolas  <brouard@ined.fr>
   
         * version.h: *** empty log message ***          * imach.c: Summary: More documentation on projections
   
         * imach.c: Summary: temporary          * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
   
 2015-10-27  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Some bug with rint
   
         * Makefile: *** empty log message ***  2017-05-24  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in: Summary: some new subdirs          * imach.c: *** empty log message ***
   
         * imach.c: *** empty log message ***  2017-05-23  Brouard Nicolas  <brouard@ined.fr>
   
         * setup.iss.in:          * imach.c: Summary: Code into subroutine, cleanings
         Summary: Adding gnuplot 5.1 with bin and etc for pango fonts  
   2017-05-18  Brouard Nicolas  <brouard@ined.fr>
 2015-10-24  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * imach.c: *** empty log message ***          Summary: backprojection and confidence intervals of backprevalence
   
 2015-10-23  Brouard Nicolas  <brouard@ined.fr>  2017-05-13  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c:          * imach.c: Summary: temporary save for backprojection
         Summary: 0.98r3 some clarification for graphs on likelihood contributions  
           * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
 2015-10-01  Brouard Nicolas  <brouard@ined.fr>  
   2017-04-26  Brouard Nicolas  <brouard@ined.fr>
         * imach.c: Summary: Some new graphs of contribution to likelihood  
           * imach.c: Summary: imach 0.99r13 Some bugs fixed
 2015-09-30  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c: Summary: Labels in graphs
         * Makefile:  
         Summary: Version read from version.h, itself read with cmake  2017-04-24  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c: Summary: looking at better estimation of the hessian          * imach.c: Summary: to save
   
         Also a better criteria for convergence to the period prevalence And  2017-04-18  Brouard Nicolas  <brouard@ined.fr>
         therefore adding the number of years needed to converge. (The  
         prevalence in any alive state shold sum to one          * imach.c: *** empty log message ***
   
         * Makefile: *** empty log message ***  2017-04-05  Brouard Nicolas  <brouard@ined.fr>
   
 2015-09-22  Brouard Nicolas  <brouard@ined.fr>          * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
   
         * imach.c:  2017-04-04  Brouard Nicolas  <brouard@ined.fr>
         Summary: Adding some overall graph on contribution to likelihood. Might change  
           * imach.c: Summary: Gnuplot indexations fixed (humm)
 2015-09-15  Brouard Nicolas  <brouard@ined.fr>  
           * imach.c:
         * Makefile: *** empty log message ***          Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
   
         * imach.c: Summary: 0.98r0  2017-04-03  Brouard Nicolas  <brouard@ined.fr>
   
         - Some new graphs like suvival functions          * imach.c: Summary: Version 0.99r12
         - Some bugs fixed like model=1+age+V2.          Some cleanings, conformed with updated documentation.
   
         * ChangeLog, Makefile: Summary: 0.98r0  2017-03-30  Brouard Nicolas  <brouard@ined.fr>
   
         * CMakeLists.txt: Summary: Some tests for setup.iss          * version.h: *** empty log message ***
   
 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>          * version.h: Summary:0.99r11
   
         *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc  2017-03-29  Brouard Nicolas  <brouard@ined.fr>
   
 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>          * imach.c: Summary: Temp
   
         *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.  2017-03-27  Brouard Nicolas  <brouard@ined.fr>
   
 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>          * imach.c: Summary: Temporary
   
         *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)  2017-03-08  Brouard Nicolas  <brouard@ined.fr>
   
 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>          * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
   
         * imach.c (Module): Merging 1.61 to 1.162          * imach.c: Summary: Fixing data parameter line
   
 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>  2016-12-15  Brouard Nicolas  <brouard@ined.fr>
   
         * prevlim.h (Module):          * imach.c: Summary: 0.99 in progress
   
 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>  2016-09-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...          * imach.c: *** empty log message ***
         (Module): Version 0.98nR Running ok, but output format still only works for three covariates.  
           * imach.c: Summary: not working
 2010-04-29  brouard  <brouard@ined.fr>  
   2016-09-08  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Checking covariates for more complex models  
         than V1+V2. A lot of change to be done. Unstable.          * imach.c: Summary: continue
   
 2010-04-26  brouard  <brouard@ined.fr>  2016-09-07  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): merging some libgsl code. Fixing computation          * imach.c: Summary: Starting values from frequencies
         of likelione (using inter/intrapolation if mle = 0) in order to  
         get same likelihood as if mle=1.          * imach.c: *** empty log message ***
         Some cleaning of code and comments added.  
   2016-09-02  Brouard Nicolas  <brouard@ined.fr>
 2009-10-29  brouard  <brouard@ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.  
   2016-08-30  Brouard Nicolas  <brouard@ined.fr>
 2006-06-30  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: Fixing a lots
         * imach.c (Module): Clarifications on computing e.j  
   2016-08-29  Brouard Nicolas  <brouard@ined.fr>
 2006-04-28  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: gnuplot problem in Back projection to fix
         * imach.c (Module): Yes the sum of survivors was wrong since  
         imach-114 because nhstepm was no more computed in the age          * imach.c: Summary: Better
         loop. Now we define nhstepma in the age loop.  
         (Module): In order to speed up (in case of numerous covariates) we  2016-08-26  Brouard Nicolas  <brouard@ined.fr>
         compute health expectancies (without variances) in a first step  
         and then all the health expectancies with variances or standard          * imach.c:
         deviation (needs data from the Hessian matrices) which slows the          Summary: Improvement in Powell output in order to copy and paste
         computation.  
         In the future we should be able to stop the program is only health          * imach.c: Summary: Starting tests of 0.99
         expectancies and graph are needed without standard deviations.  
           * imach.c: Summary: to valgrind
 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
   2016-08-25  Brouard Nicolas  <brouard@ined.fr>
         * imach.iss (Module):  
           * imach.c: *** empty log message ***
         * imach.c (Module): bugs in evsi + population file added in htm output file  
   2016-08-23  Brouard Nicolas  <brouard@ined.fr>
 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
           * imach.c: *** empty log message ***
         * imach.c (Module):  
           * imach.c: Summary: not working
 2006-03-20  Brouard Nicolas  <brouard@localhost>  
   2016-08-22  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): <title> changed, corresponds to .htm file  
         name. <head> headers where missing.          * imach.c: Summary: not working
   
         * Makefile (Module): 0.98g          * imach.c: Summary: Not working
   
         * imach.c (Module): Weights can have a decimal point as for  2016-07-23  Brouard Nicolas  <brouard@ined.fr>
         English (a comma might work with a correct LC_NUMERIC environment,  
         otherwise the weight is truncated).          * imach.c: Summary: Completing for func too
         Modification of warning when the covariates values are not 0 or  
         1.  2016-07-22  Brouard Nicolas  <brouard@ined.fr>
         Version 0.98g  
           * imach.c: Summary: Fixing some arrays, still debugging
 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
   2016-07-21  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Comments concerning covariates added  
           * imach.c:
         * noreg-setup.iss (Module): Version 0.98f          Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
   
         * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup  2016-07-12  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): refinements in the computation of lli if          * imach.c: Summary: temp
         status=-2 in order to have more reliable computation if stepm is  
         not 1 month. Version 0.98f          * imach.c: Summary: saving but not running
   
 2006-03-15  Brouard Nicolas  <brouard@localhost>  2016-07-01  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Bug if status = -2, the loglikelihood was          * imach.c: Summary: Fixes
         computed as likelihood omitting the logarithm. Version O.98e  
   2016-02-19  Brouard Nicolas  <brouard@ined.fr>
 2006-03-14  Brouard Nicolas  <brouard@localhost>  
           * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
         * imach.c (Module): varevsij Comments added explaining the second  
         table of variances if popbased=1 .          * setup.iss, Makefile, version.h: *** empty log message ***
         (Module): Covariances of eij, ekl added, graphs fixed, new html link.  
         (Module): Function pstamp added          * imach.c: Summary: temporary
         (Module): Version 0.98d  
   2016-02-17  Brouard Nicolas  <brouard@ined.fr>
 2006-03-06  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: Probably last 0.98 stable version 0.98r6
         * imach.c (Module): Variance-covariance wrong links and  
         varian-covariance of ej. is needed (Saito).  2016-02-16  Brouard Nicolas  <brouard@ined.fr>
   
 2006-02-27  Brouard Nicolas  <brouard@localhost>          * imach.c: Summary: minor bug
   
         * imach.c (Module): One freematrix added in mlikeli!          * imach.c: Summary: 0.99r2
   
 2006-02-26  Brouard Nicolas  <brouard@localhost>  2016-02-15  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Some improvements in processing parameter          * imach.c: *** empty log message ***
         filename with strsep.  
   2016-02-12  Brouard Nicolas  <brouard@ined.fr>
 2006-02-24  Brouard Nicolas  <brouard@localhost>  
           * imach.c: Summary: 0.99 Back projections
         * imach.c (Module): Memory leaks checks with valgrind and:  
         datafile was not closed, some imatrix were not freed and on matrix  2015-12-23  Brouard Nicolas  <brouard@ined.fr>
         allocation too.  
           * imach.c: Summary: Experimental backcast
 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>  
   2015-12-18  Brouard Nicolas  <brouard@ined.fr>
         * strsep.c (Module): Inclusion because not in mingw32!!!  
           * imach.c: Summary: 0.98r4 Warning and status=-2
         * setup.iss.in (Module): IMACHSETUPVERSION added  
           Version 0.98r4 is now:
         * noreg-setup.iss (Module): added to cvs tree           - displaying an error when status is -1, date of interview unknown and date of death known;
            - permitting a status -2 when the vital status is unknown at a known date of right truncation.
         * Makefile (Module): IMACHSETUPVERSION added          Older changes concerning s=-2, dating from 2005 have been supersed.
   
 2006-01-30  BROUARD Nicolas  <brouard@localhost>          * Makefile: *** empty log message ***
   
         * Makefile (Module, Module): Latest Makefile  2015-12-16  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe          * Makefile: *** empty log message ***
   
 2006-01-27  BROUARD Nicolas  <brouard@localhost>          * imach.c: Summary: 0.98r4 working
   
         * noreg-setup.iss (Module): ADDED          * Makefile: Summary: linuxrpm added
   
 2006-01-24  BROUARD Nicolas  <brouard@localhost>          * Makefile: *** empty log message ***
   
         * imach.c (Module): Comments (lines starting with a #) are allowed in data.          * imach.c: Summary: temporary not working
   
 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>  2015-12-11  Brouard Nicolas  <brouard@ined.fr>
   
         * Makefile (Module): Added Imach98.pmsp and howto crete a dmg          * imach.c: Summary: 0.98r4
   
         * createdmg.sh (Module): Creates a dmg disk for MaC OS/X  2015-12-08  Brouard Nicolas  <brouard@ined.fr>
   
 2005-09-30    <lievre@PC_00595>          * Makefile: *** empty log message ***
   
         * imach.c (Module): sump fixed, loop imx fixed, and simplifications.  2015-11-21  Brouard Nicolas  <brouard@ined.fr>
         (Module): If the status is missing at the last wave but we know  
         that the person is alive, then we can code his/her status as -2          * Makefile:
         (instead of missing=-1 in earlier versions) and his/her          Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
         contributions to the likelihood is 1 - Prob of dying from last  
         health status (= 1-p13= p11+p12 in the easiest case of somebody in          * imach.c: Summary: minor typo
         the healthy state at last known wave). Version is 0.98  
           * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
 2004-05-20  Brouard Nicolas  <brouard@localhost>  
           Author: Nicolas Brouard
         * imach.c (Repository):  
         Agnes added a direct estimation of mortality (without the need of  2015-11-18  Brouard Nicolas  <brouard@ined.fr>
         computing period prevalence and differential mortality). Thus here  
         is version 0.97a which has been distributed to some people at          * imach.c: Summary: Start working on projected prevalences
         REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of  
         mortality using covariates is not done today. Estimating direct  2015-11-17  Brouard Nicolas  <brouard@ined.fr>
         mortality is a very different process because it doesn't need  
         interpolation because it is easy to get the lx from the force of          * imach.c: Summary: Adding ftolpl parameter
         the mortality mux in the simplest case as for a Gompertz (log mux          Author: N Brouard
         = a + b*x . But we have been able to incorporate the new code  
         within former imach program (0.96d) without deteriorating too much          We had difficulties to get smoothed confidence intervals. It was due
         the understanding of the program.          to the period prevalence which wasn't computed accurately. The inner
           parameter ftolpl is now an outer parameter of the .imach parameter
 2003-06-25    <brouard@BROUARD>          file after estepm. If ftolpl is small 1.e-4 and estepm too,
           computation are long.
         * imach.c (Module): On windows (cygwin) function asctime_r doesn't  
         exist so I changed back to asctime which exists.          * version.h: *** empty log message ***
         (Module): Version 0.96b  
           * imach.c: Summary: temporary
 2003-06-24    <brouard@BROUARD>  
   2015-10-27  Brouard Nicolas  <brouard@ined.fr>
         * imach.c (Module): Some bugs corrected for windows. Also, when  
         mle=-1 a template is output in file "or"mypar.txt with the design          * Makefile: *** empty log message ***
         of the covariance matrix to be input.  
           * setup.iss.in: Summary: some new subdirs
 2003-06-25  Brouard Nicolas  <brouard@homebrou>  
           * imach.c: *** empty log message ***
         * imach.c (Repository): Duplicated warning errors corrected.  
         (Repository): Elapsed time after each iteration is now output. It          * setup.iss.in:
         helps to forecast when convergence will be reached. Elapsed time          Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
         is stamped in powell.  We created a new html file for the graphs  
         concerning matrix of covariance. It has extension -cov.htm.  2015-10-24  Brouard Nicolas  <brouard@ined.fr>
   
 2003-06-23  Brouard Nicolas  <brouard@homebrou>          * imach.c: *** empty log message ***
   
         * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.  2015-10-23  Brouard Nicolas  <brouard@ined.fr>
   
 2003-06-18  Brouard Nicolas  <brouard@homebrou>          * imach.c:
           Summary: 0.98r3 some clarification for graphs on likelihood contributions
         * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96  
   2015-10-01  Brouard Nicolas  <brouard@ined.fr>
 2003-06-17  Brouard Nicolas  <brouard@homebrou>  
           * imach.c: Summary: Some new graphs of contribution to likelihood
   
         * imach.c (Repository): Check when date of death was earlier that  2015-09-30  Brouard Nicolas  <brouard@ined.fr>
         current date of interview. It may happen when the death was just  
         prior to the death. In this case, dh was negative and likelihood          * Makefile:
         was wrong (infinity). We still send an "Error" but patch by          Summary: Version read from version.h, itself read with cmake
         assuming that the date of death was just one stepm after the  
         interview.          * imach.c: Summary: looking at better estimation of the hessian
         (Repository): Because some people have very long ID (first column)  
         we changed int to long in num[] and we added a new lvector for          Also a better criteria for convergence to the period prevalence And
         memory allocation. But we also truncated to 8 characters (left          therefore adding the number of years needed to converge. (The
         truncation)          prevalence in any alive state shold sum to one
   
         (Repository): No more line truncation errors.          * Makefile: *** empty log message ***
   
 2003-06-14  Brouard Nicolas  <brouard@homebrou>  2015-09-22  Brouard Nicolas  <brouard@ined.fr>
   
         * imach.c (Repository): Add of a routine likelione (likelihood          * imach.c:
         only once) which prints on a text file          Summary: Adding some overall graph on contribution to likelihood. Might change
         (ilk) the contributions to the likelihood for each  
         individual/wave.  2015-09-15  Brouard Nicolas  <brouard@ined.fr>
   
 2003-06-13  Brouard Nicolas  <brouard@homebrou>          * Makefile: *** empty log message ***
         * imach.c (Repository): Replace "freqsummary" at a correct  
         place. It differs from routine "prevalence" which may be called          * imach.c: Summary: 0.98r0
         many times. Probs is memory consuming and must be used with  
         parcimony.          - Some new graphs like survival functions
           - Some bugs fixed like model=1+age+V2.
 2003-06-17    <brouard@BROUARD>  
           * ChangeLog, Makefile: Summary: 0.98r0
         * timeval.h (Module): Added included file to make use of  
         gettimeofday working on win32 with cygwin.          * CMakeLists.txt: Summary: Some tests for setup.iss
   
 2003-05-16  Brouard Nicolas  <brouard@brouard>  2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
         * imach.c (Module): Insert of a warning if the delay between two  
         waves is negative.          *  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
   
         * imach.c (Module):  2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
   
 2003-05-03    <brouard@BROUARD>          *  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
   
         * imach.c: Some cleaning  2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
   
 2003-03-28    <brouard@BROUARD>          *  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
         * imach.c (Module): In version up to 0.92 likelihood was computed  
         as if date of death was unknown. Death was treated as any other  2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
         health state: the date of the interview describes the actual state  
         and not the date of a change in health state. The former idea was          * imach.c (Module): Merging 1.61 to 1.162
         to consider that at each interview the state was recorded  
         (healthy, disable or death) and IMaCh was corrected; but when we  2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
         introduced the exact date of death then we should have modified  
         the contribution of an exact death to the likelihood. This new          * prevlim.h (Module): 
         contribution is smaller and very dependent of the step unit  
         stepm. It is no more the probability to die between last interview  2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
         and month of death but the probability to survive from last  
         interview up to one month before death multiplied by the          * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
         probability to die within a month. Thanks to Chris          (Module): Version 0.98nR Running ok, but output format still only works for three covariates.
         Jackson for correcting this bug.  Former versions increased  
         mortality artificially. The bad side is that we add another loop  2010-04-29  brouard  <brouard@ined.fr>
   
           * imach.c (Module): Checking covariates for more complex models
         which slows down the processing. The difference can be up to 10%          than V1+V2. A lot of change to be done. Unstable.
   
   2010-04-26  brouard  <brouard@ined.fr>
         lower mortality.  
           * imach.c (Module): merging some libgsl code. Fixing computation
           of likelione (using inter/intrapolation if mle = 0) in order to
           get same likelihood as if mle=1.
           Some cleaning of code and comments added.
   
 2002-05-30    <brouard@BROUARD>  2009-10-29  brouard  <brouard@ined.fr>
   
           * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
   
   2006-06-30  Brouard Nicolas  <brouard@localhost>
   
         *          * imach.c (Module): Clarifications on computing e.j
   
   2006-04-28  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Yes the sum of survivors was wrong since
           imach-114 because nhstepm was no more computed in the age
         * imach.c (Module): Add correlation matrix of one-step          loop. Now we define nhstepma in the age loop.
           (Module): In order to speed up (in case of numerous covariates) we
           compute health expectancies (without variances) in a first step
         probabilities and covariance matrix          and then all the health expectancies with variances or standard
           deviation (needs data from the Hessian matrices) which slows the
           computation.
           In the future we should be able to stop the program is only health
           expectancies and graph are needed without standard deviations.
   
   2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.iss (Module): 
   
           * imach.c (Module): bugs in evsi + population file added in htm output file
   
   2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.c (Module): 
   
   2006-03-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): <title> changed, corresponds to .htm file
           name. <head> headers where missing.
   
           * Makefile (Module): 0.98g
   
           * imach.c (Module): Weights can have a decimal point as for
           English (a comma might work with a correct LC_NUMERIC environment,
           otherwise the weight is truncated).
           Modification of warning when the covariates values are not 0 or
           1. 
           Version 0.98g
   
   2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * imach.c (Module): Comments concerning covariates added
   
           * noreg-setup.iss (Module): Version 0.98f
   
           * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
   
           * imach.c (Module): refinements in the computation of lli if
           status=-2 in order to have more reliable computation if stepm is
           not 1 month. Version 0.98f
   
   2006-03-15  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Bug if status = -2, the loglikelihood was
           computed as likelihood omitting the logarithm. Version O.98e
   
   2006-03-14  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): varevsij Comments added explaining the second
           table of variances if popbased=1 .
           (Module): Covariances of eij, ekl added, graphs fixed, new html link.
           (Module): Function pstamp added
           (Module): Version 0.98d 
   
   2006-03-06  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Variance-covariance wrong links and
           varian-covariance of ej. is needed (Saito).
   
   2006-02-27  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): One freematrix added in mlikeli!
   
   2006-02-26  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Some improvements in processing parameter
           filename with strsep.
   
   2006-02-24  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Module): Memory leaks checks with valgrind and:
           datafile was not closed, some imatrix were not freed and on matrix
           allocation too.
   
   2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
   
           * strsep.c (Module): Inclusion because not in mingw32!!!
   
           * setup.iss.in (Module): IMACHSETUPVERSION added
   
           * noreg-setup.iss (Module): added to cvs tree
   
           * Makefile (Module): IMACHSETUPVERSION added
   
   2006-01-30  BROUARD Nicolas  <brouard@localhost>
   
           * Makefile (Module, Module): Latest Makefile
   
           * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
   
   2006-01-27  BROUARD Nicolas  <brouard@localhost>
   
           * noreg-setup.iss (Module): ADDED
   
   2006-01-24  BROUARD Nicolas  <brouard@localhost>
   
           * imach.c (Module): Comments (lines starting with a #) are allowed in data.
   
   2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
   
           * Makefile (Module): Added Imach98.pmsp and howto crete a dmg
   
           * createdmg.sh (Module): Creates a dmg disk for MaC OS/X
   
   2005-09-30    <lievre@PC_00595>
   
           * imach.c (Module): sump fixed, loop imx fixed, and simplifications.
           (Module): If the status is missing at the last wave but we know
           that the person is alive, then we can code his/her status as -2
           (instead of missing=-1 in earlier versions) and his/her
           contributions to the likelihood is 1 - Prob of dying from last
           health status (= 1-p13= p11+p12 in the easiest case of somebody in
           the healthy state at last known wave). Version is 0.98 
   
   2004-05-20  Brouard Nicolas  <brouard@localhost>
   
           * imach.c (Repository): 
           Agnes added a direct estimation of mortality (without the need of
           computing period prevalence and differential mortality). Thus here
           is version 0.97a which has been distributed to some people at
           REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
           mortality using covariates is not done today. Estimating direct
           mortality is a very different process because it doesn't need
           interpolation because it is easy to get the lx from the force of
           the mortality mux in the simplest case as for a Gompertz (log mux
           = a + b*x . But we have been able to incorporate the new code
           within former imach program (0.96d) without deteriorating too much
           the understanding of the program. 
   
   2003-06-25    <brouard@BROUARD>
   
           * imach.c (Module): On windows (cygwin) function asctime_r doesn't
           exist so I changed back to asctime which exists.
           (Module): Version 0.96b
   
   2003-06-24    <brouard@BROUARD>
   
           * imach.c (Module): Some bugs corrected for windows. Also, when
           mle=-1 a template is output in file "or"mypar.txt with the design
           of the covariance matrix to be input.
   
   2003-06-25  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Duplicated warning errors corrected.
           (Repository): Elapsed time after each iteration is now output. It
           helps to forecast when convergence will be reached. Elapsed time
           is stamped in powell.  We created a new html file for the graphs
           concerning matrix of covariance. It has extension -cov.htm.
   
   2003-06-23  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
   
   2003-06-18  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
   
   2003-06-17  Brouard Nicolas  <brouard@homebrou>
   
   
           * imach.c (Repository): Check when date of death was earlier that
           current date of interview. It may happen when the death was just
           prior to the death. In this case, dh was negative and likelihood
           was wrong (infinity). We still send an "Error" but patch by
           assuming that the date of death was just one stepm after the
           interview.
           (Repository): Because some people have very long ID (first column)
           we changed int to long in num[] and we added a new lvector for
           memory allocation. But we also truncated to 8 characters (left
           truncation)
   
           (Repository): No more line truncation errors.
   
   2003-06-14  Brouard Nicolas  <brouard@homebrou>
   
           * imach.c (Repository): Add of a routine likelione (likelihood
           only once) which prints on a text file
           (ilk) the contributions to the likelihood for each
           individual/wave.
   
   2003-06-13  Brouard Nicolas  <brouard@homebrou>
           * imach.c (Repository): Replace "freqsummary" at a correct
           place. It differs from routine "prevalence" which may be called
           many times. Probs is memory consuming and must be used with
           parcimony.
   
   2003-06-17    <brouard@BROUARD>
   
           * timeval.h (Module): Added included file to make use of
           gettimeofday working on win32 with cygwin.
   
   2003-05-16  Brouard Nicolas  <brouard@brouard>
           * imach.c (Module): Insert of a warning if the delay between two
           waves is negative.
   
           * imach.c (Module): 
   
   2003-05-03    <brouard@BROUARD>
   
           * imach.c: Some cleaning
   
   2003-03-28    <brouard@BROUARD>
           * imach.c (Module): In version up to 0.92 likelihood was computed
           as if date of death was unknown. Death was treated as any other
           health state: the date of the interview describes the actual state
           and not the date of a change in health state. The former idea was
           to consider that at each interview the state was recorded
           (healthy, disable or death) and IMaCh was corrected; but when we
           introduced the exact date of death then we should have modified
           the contribution of an exact death to the likelihood. This new
           contribution is smaller and very dependent of the step unit
           stepm. It is no more the probability to die between last interview
           and month of death but the probability to survive from last
           interview up to one month before death multiplied by the
           probability to die within a month. Thanks to Chris
           Jackson for correcting this bug.  Former versions increased
           mortality artificially. The bad side is that we add another loop
           which slows down the processing. The difference can be up to 10%
           lower mortality.
   
   2002-05-30    <brouard@BROUARD>
   
           * imach.c (Module): Add correlation matrix of one-step
           probabilities and covariance matrix
   
Removed from v.1.45  
changed lines
  Added in v.1.72

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