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Tue May 21 15:55:06 2019 UTC (5 years, 5 months ago) by brouard
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Summary: RPM and SRPMS

1: 2019-05-20 Brouard Nicolas <brouard@brouard.name> 2: 3: * version.h: Summary: version 0.99.r19 4: 5: * imach.c: Summary: Projection syntax simplified 6: We can now start projections, forward or backward, from the mean date 7: of inteviews up to or down to a number of years of projection: 8: prevforecast=1 yearsfproj=15.3 mobil_average=0 9: or 10: prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0 11: or 12: prevbackcast=1 yearsbproj=12.3 mobil_average=1 13: or 14: prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1 15: 16: 2019-05-18 Brouard Nicolas <brouard@brouard.name> 17: 18: * imach.c: Summary: doxygen tex bug 19: 20: 2019-05-16 Brouard Nicolas <brouard@brouard.name> 21: 22: * imach.c: Summary: There was some wrong lines added 23: 24: 2019-05-09 Brouard Nicolas <brouard@brouard.name> 25: 26: * Makefile, imach.c: *** empty log message *** 27: 28: * ChangeLog: Summary: C= 29: 30: * imach.c: Summary: Some updates 31: 32: * imach.c: Summary: Before ncovmax 33: 34: * version.h: *** empty log message *** 35: 36: * imach.c: Summary: 0.99r18 unlimited number of individuals 37: The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur. 38: 39: 2018-12-13 Brouard Nicolas <brouard@brouard.name> 40: 41: * imach.c: Summary: Bug for young ages (<-30) will be in r17 42: 43: 2018-12-05 Brouard Nicolas <brouard@brouard.name> 44: 45: * Makefile: Summary: 0.99r16 46: 47: 2018-05-02 Brouard Nicolas <brouard@brouard.name> 48: 49: * imach.c: Summary: Some bugs fixed 50: 51: 2018-05-02 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 52: 53: * imach.c: Summary: Bug for young ages (<-30) will be in r17 54: 55: 2018-05-02 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 56: 57: * imach.c: Summary: Some bugs fixed 58: 59: 2018-05-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 60: 61: * imach.c: 62: Summary: Bug fixed by providing frequencies only for non missing covariates 63: 64: 2018-04-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 65: 66: * imach.c: Summary: some minor bugs 67: 68: 2018-04-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 69: 70: * README.txt: *** empty log message *** 71: 72: * imach.c: Summary: Some bugs fixed, valgrind tested 73: 74: 2018-04-20 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 75: 76: * Makefile, README.txt, setup.iss: Summary: imach 0.99r16 77: 78: * imach.c: 79: Summary: Computing mean and stdeviation of fixed quantitative variables 80: 81: 2018-04-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 82: 83: * imach.c: Summary: Some minor bugs fixed 84: 85: * version.h: *** empty log message *** 86: 87: 2018-02-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 88: 89: * imach.c: *** empty log message *** 90: 91: * imach.c: Summary: Adding second argument for quitting 92: 93: 2018-02-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 94: 95: * Makefile, README.txt, imach.c: Summary: 0.99r15 96: New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c 97: 98: 2017-07-20 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 99: 100: * imach.c: Summary: temporary working 101: 102: 2017-07-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 103: 104: * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?) 105: 106: 2017-07-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 107: 108: * imach.c: Summary: BOM files can be read now 109: 110: 2017-06-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 111: 112: * imach.c: Summary: Graphs improvements 113: 114: * imach.c: Summary: Saito's color 115: 116: 2017-06-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 117: 118: * imach.c: Summary: Version 0.99r14 119: 120: 2017-06-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 121: 122: * imach.c: Summary: More documentation on projections 123: 124: * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow) 125: 126: * imach.c: Summary: Some bug with rint 127: 128: 2017-05-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 129: 130: * imach.c: *** empty log message *** 131: 132: 2017-05-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 133: 134: * imach.c: Summary: Code into subroutine, cleanings 135: 136: 2017-05-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 137: 138: * imach.c: 139: Summary: backprojection and confidence intervals of backprevalence 140: 141: 2017-05-13 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 142: 143: * imach.c: Summary: temporary save for backprojection 144: 145: * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed) 146: 147: 2017-04-26 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 148: 149: * imach.c: Summary: imach 0.99r13 Some bugs fixed 150: 151: * imach.c: Summary: Labels in graphs 152: 153: 2017-04-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 154: 155: * imach.c: Summary: to save 156: 157: 2017-04-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 158: 159: * imach.c: *** empty log message *** 160: 161: 2017-04-05 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 162: 163: * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1 164: 165: 2017-04-04 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 166: 167: * imach.c: Summary: Gnuplot indexations fixed (humm) 168: 169: * imach.c: 170: Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3 171: 172: 2017-04-03 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 173: 174: * imach.c: Summary: Version 0.99r12 175: Some cleanings, conformed with updated documentation. 176: 177: 2017-03-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 178: 179: * version.h: *** empty log message *** 180: 181: * version.h: Summary:0.99r11 182: 183: 2017-03-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 184: 185: * imach.c: Summary: Temp 186: 187: 2017-03-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 188: 189: * imach.c: Summary: Temporary 190: 191: 2017-03-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 192: 193: * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed 194: 195: * imach.c: Summary: Fixing data parameter line 196: 197: 2016-12-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 198: 199: * imach.c: Summary: 0.99 in progress 200: 201: 2016-09-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 202: 203: * imach.c: *** empty log message *** 204: 205: * imach.c: Summary: not working 206: 207: 2016-09-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 208: 209: * imach.c: Summary: continue 210: 211: 2016-09-07 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 212: 213: * imach.c: Summary: Starting values from frequencies 214: 215: * imach.c: *** empty log message *** 216: 217: 2016-09-02 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 218: 219: * imach.c: *** empty log message *** 220: 221: 2016-08-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 222: 223: * imach.c: Summary: Fixing a lots 224: 225: 2016-08-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 226: 227: * imach.c: Summary: gnuplot problem in Back projection to fix 228: 229: * imach.c: Summary: Better 230: 231: 2016-08-26 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 232: 233: * imach.c: 234: Summary: Improvement in Powell output in order to copy and paste 235: 236: * imach.c: Summary: Starting tests of 0.99 237: 238: * imach.c: Summary: to valgrind 239: 240: 2016-08-25 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 241: 242: * imach.c: *** empty log message *** 243: 244: 2016-08-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 245: 246: * imach.c: *** empty log message *** 247: 248: * imach.c: Summary: not working 249: 250: 2016-08-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 251: 252: * imach.c: Summary: not working 253: 254: * imach.c: Summary: Not working 255: 256: 2016-07-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 257: 258: * imach.c: Summary: Completing for func too 259: 260: 2016-07-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 261: 262: * imach.c: Summary: Fixing some arrays, still debugging 263: 264: 2016-07-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 265: 266: * imach.c: 267: Summary: 0.99 working (more or less) for Asian Workshop on multitate methods 268: 269: 2016-07-12 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 270: 271: * imach.c: Summary: temp 272: 273: * imach.c: Summary: saving but not running 274: 275: 2016-07-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 276: 277: * imach.c: Summary: Fixes 278: 279: 2016-02-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 280: 281: * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7 282: 283: * setup.iss, Makefile, version.h: *** empty log message *** 284: 285: * imach.c: Summary: temporary 286: 287: 2016-02-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 288: 289: * imach.c: Summary: Probably last 0.98 stable version 0.98r6 290: 291: 2016-02-16 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 292: 293: * imach.c: Summary: minor bug 294: 295: * imach.c: Summary: 0.99r2 296: 297: 2016-02-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 298: 299: * imach.c: *** empty log message *** 300: 301: 2016-02-12 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 302: 303: * imach.c: Summary: 0.99 Back projections 304: 305: 2015-12-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 306: 307: * imach.c: Summary: Experimental backcast 308: 309: 2015-12-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 310: 311: * imach.c: Summary: 0.98r4 Warning and status=-2 312: 313: Version 0.98r4 is now: 314: - displaying an error when status is -1, date of interview unknown and date of death known; 315: - permitting a status -2 when the vital status is unknown at a known date of right truncation. 316: Older changes concerning s=-2, dating from 2005 have been supersed. 317: 318: * Makefile: *** empty log message *** 319: 320: 2015-12-16 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 321: 322: * Makefile: *** empty log message *** 323: 324: * imach.c: Summary: 0.98r4 working 325: 326: * Makefile: Summary: linuxrpm added 327: 328: * Makefile: *** empty log message *** 329: 330: * imach.c: Summary: temporary not working 331: 332: 2015-12-11 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 333: 334: * imach.c: Summary: 0.98r4 335: 336: 2015-12-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 337: 338: * Makefile: *** empty log message *** 339: 340: 2015-11-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 341: 342: * Makefile: 343: Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more 344: 345: * imach.c: Summary: minor typo 346: 347: * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional 348: 349: Author: Nicolas Brouard 350: 351: 2015-11-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 352: 353: * imach.c: Summary: Start working on projected prevalences 354: 355: 2015-11-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 356: 357: * imach.c: Summary: Adding ftolpl parameter 358: Author: N Brouard 359: 360: We had difficulties to get smoothed confidence intervals. It was due 361: to the period prevalence which wasn't computed accurately. The inner 362: parameter ftolpl is now an outer parameter of the .imach parameter 363: file after estepm. If ftolpl is small 1.e-4 and estepm too, 364: computation are long. 365: 366: * version.h: *** empty log message *** 367: 368: * imach.c: Summary: temporary 369: 370: 2015-10-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 371: 372: * Makefile: *** empty log message *** 373: 374: * setup.iss.in: Summary: some new subdirs 375: 376: * imach.c: *** empty log message *** 377: 378: * setup.iss.in: 379: Summary: Adding gnuplot 5.1 with bin and etc for pango fonts 380: 381: 2015-10-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 382: 383: * imach.c: *** empty log message *** 384: 385: 2015-10-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 386: 387: * imach.c: 388: Summary: 0.98r3 some clarification for graphs on likelihood contributions 389: 390: 2015-10-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 391: 392: * imach.c: Summary: Some new graphs of contribution to likelihood 393: 394: 2015-09-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 395: 396: * Makefile: 397: Summary: Version read from version.h, itself read with cmake 398: 399: * imach.c: Summary: looking at better estimation of the hessian 400: 401: Also a better criteria for convergence to the period prevalence And 402: therefore adding the number of years needed to converge. (The 403: prevalence in any alive state shold sum to one 404: 405: * Makefile: *** empty log message *** 406: 407: 2015-09-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 408: 409: * imach.c: 410: Summary: Adding some overall graph on contribution to likelihood. Might change 411: 412: 2015-09-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 413: 414: * Makefile: *** empty log message *** 415: 416: * imach.c: Summary: 0.98r0 417: 418: - Some new graphs like suvival functions 419: - Some bugs fixed like model=1+age+V2. 420: 421: * ChangeLog, Makefile: Summary: 0.98r0 422: 423: * CMakeLists.txt: Summary: Some tests for setup.iss 424: 425: 2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr> 426: 427: * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc 428: 429: 2015-08-18 Nicolas J Brouard <nbrouard@tugault.local> 430: 431: * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line. 432: 433: 2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr> 434: 435: * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih) 436: 437: 2014-12-16 Nicolas J Brouard <nbrouard@tugault.local> 438: 439: * imach.c (Module): Merging 1.61 to 1.162 440: 441: 2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr> 442: 443: * prevlim.h (Module): 444: 445: 2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local> 446: 447: * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested... 448: (Module): Version 0.98nR Running ok, but output format still only works for three covariates. 449: 450: 2010-04-29 brouard <brouard@ined.fr> 451: 452: * imach.c (Module): Checking covariates for more complex models 453: than V1+V2. A lot of change to be done. Unstable. 454: 455: 2010-04-26 brouard <brouard@ined.fr> 456: 457: * imach.c (Module): merging some libgsl code. Fixing computation 458: of likelione (using inter/intrapolation if mle = 0) in order to 459: get same likelihood as if mle=1. 460: Some cleaning of code and comments added. 461: 462: 2009-10-29 brouard <brouard@ined.fr> 463: 464: * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code. 465: 466: 2006-06-30 Brouard Nicolas <brouard@localhost> 467: 468: * imach.c (Module): Clarifications on computing e.j 469: 470: 2006-04-28 Brouard Nicolas <brouard@localhost> 471: 472: * imach.c (Module): Yes the sum of survivors was wrong since 473: imach-114 because nhstepm was no more computed in the age 474: loop. Now we define nhstepma in the age loop. 475: (Module): In order to speed up (in case of numerous covariates) we 476: compute health expectancies (without variances) in a first step 477: and then all the health expectancies with variances or standard 478: deviation (needs data from the Hessian matrices) which slows the 479: computation. 480: In the future we should be able to stop the program is only health 481: expectancies and graph are needed without standard deviations. 482: 483: 2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr> 484: 485: * imach.iss (Module): 486: 487: * imach.c (Module): bugs in evsi + population file added in htm output file 488: 489: 2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr> 490: 491: * imach.c (Module): 492: 493: 2006-03-20 Brouard Nicolas <brouard@localhost> 494: 495: * imach.c (Module): <title> changed, corresponds to .htm file 496: name. <head> headers where missing. 497: 498: * Makefile (Module): 0.98g 499: 500: * imach.c (Module): Weights can have a decimal point as for 501: English (a comma might work with a correct LC_NUMERIC environment, 502: otherwise the weight is truncated). 503: Modification of warning when the covariates values are not 0 or 504: 1. 505: Version 0.98g 506: 507: 2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr> 508: 509: * imach.c (Module): Comments concerning covariates added 510: 511: * noreg-setup.iss (Module): Version 0.98f 512: 513: * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup 514: 515: * imach.c (Module): refinements in the computation of lli if 516: status=-2 in order to have more reliable computation if stepm is 517: not 1 month. Version 0.98f 518: 519: 2006-03-15 Brouard Nicolas <brouard@localhost> 520: 521: * imach.c (Module): Bug if status = -2, the loglikelihood was 522: computed as likelihood omitting the logarithm. Version O.98e 523: 524: 2006-03-14 Brouard Nicolas <brouard@localhost> 525: 526: * imach.c (Module): varevsij Comments added explaining the second 527: table of variances if popbased=1 . 528: (Module): Covariances of eij, ekl added, graphs fixed, new html link. 529: (Module): Function pstamp added 530: (Module): Version 0.98d 531: 532: 2006-03-06 Brouard Nicolas <brouard@localhost> 533: 534: * imach.c (Module): Variance-covariance wrong links and 535: varian-covariance of ej. is needed (Saito). 536: 537: 2006-02-27 Brouard Nicolas <brouard@localhost> 538: 539: * imach.c (Module): One freematrix added in mlikeli! 540: 541: 2006-02-26 Brouard Nicolas <brouard@localhost> 542: 543: * imach.c (Module): Some improvements in processing parameter 544: filename with strsep. 545: 546: 2006-02-24 Brouard Nicolas <brouard@localhost> 547: 548: * imach.c (Module): Memory leaks checks with valgrind and: 549: datafile was not closed, some imatrix were not freed and on matrix 550: allocation too. 551: 552: 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr> 553: 554: * strsep.c (Module): Inclusion because not in mingw32!!! 555: 556: * setup.iss.in (Module): IMACHSETUPVERSION added 557: 558: * noreg-setup.iss (Module): added to cvs tree 559: 560: * Makefile (Module): IMACHSETUPVERSION added 561: 562: 2006-01-30 BROUARD Nicolas <brouard@localhost> 563: 564: * Makefile (Module, Module): Latest Makefile 565: 566: * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe 567: 568: 2006-01-27 BROUARD Nicolas <brouard@localhost> 569: 570: * noreg-setup.iss (Module): ADDED 571: 572: 2006-01-24 BROUARD Nicolas <brouard@localhost> 573: 574: * imach.c (Module): Comments (lines starting with a #) are allowed in data. 575: 576: 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr> 577: 578: * Makefile (Module): Added Imach98.pmsp and howto crete a dmg 579: 580: * createdmg.sh (Module): Creates a dmg disk for MaC OS/X 581: 582: 2005-09-30 <lievre@PC_00595> 583: 584: * imach.c (Module): sump fixed, loop imx fixed, and simplifications. 585: (Module): If the status is missing at the last wave but we know 586: that the person is alive, then we can code his/her status as -2 587: (instead of missing=-1 in earlier versions) and his/her 588: contributions to the likelihood is 1 - Prob of dying from last 589: health status (= 1-p13= p11+p12 in the easiest case of somebody in 590: the healthy state at last known wave). Version is 0.98 591: 592: 2004-05-20 Brouard Nicolas <brouard@localhost> 593: 594: * imach.c (Repository): 595: Agnes added a direct estimation of mortality (without the need of 596: computing period prevalence and differential mortality). Thus here 597: is version 0.97a which has been distributed to some people at 598: REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of 599: mortality using covariates is not done today. Estimating direct 600: mortality is a very different process because it doesn't need 601: interpolation because it is easy to get the lx from the force of 602: the mortality mux in the simplest case as for a Gompertz (log mux 603: = a + b*x . But we have been able to incorporate the new code 604: within former imach program (0.96d) without deteriorating too much 605: the understanding of the program. 606: 607: 2003-06-25 <brouard@BROUARD> 608: 609: * imach.c (Module): On windows (cygwin) function asctime_r doesn't 610: exist so I changed back to asctime which exists. 611: (Module): Version 0.96b 612: 613: 2003-06-24 <brouard@BROUARD> 614: 615: * imach.c (Module): Some bugs corrected for windows. Also, when 616: mle=-1 a template is output in file "or"mypar.txt with the design 617: of the covariance matrix to be input. 618: 619: 2003-06-25 Brouard Nicolas <brouard@homebrou> 620: 621: * imach.c (Repository): Duplicated warning errors corrected. 622: (Repository): Elapsed time after each iteration is now output. It 623: helps to forecast when convergence will be reached. Elapsed time 624: is stamped in powell. We created a new html file for the graphs 625: concerning matrix of covariance. It has extension -cov.htm. 626: 627: 2003-06-23 Brouard Nicolas <brouard@homebrou> 628: 629: * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things. 630: 631: 2003-06-18 Brouard Nicolas <brouard@homebrou> 632: 633: * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96 634: 635: 2003-06-17 Brouard Nicolas <brouard@homebrou> 636: 637: 638: * imach.c (Repository): Check when date of death was earlier that 639: current date of interview. It may happen when the death was just 640: prior to the death. In this case, dh was negative and likelihood 641: was wrong (infinity). We still send an "Error" but patch by 642: assuming that the date of death was just one stepm after the 643: interview. 644: (Repository): Because some people have very long ID (first column) 645: we changed int to long in num[] and we added a new lvector for 646: memory allocation. But we also truncated to 8 characters (left 647: truncation) 648: 649: (Repository): No more line truncation errors. 650: 651: 2003-06-14 Brouard Nicolas <brouard@homebrou> 652: 653: * imach.c (Repository): Add of a routine likelione (likelihood 654: only once) which prints on a text file 655: (ilk) the contributions to the likelihood for each 656: individual/wave. 657: 658: 2003-06-13 Brouard Nicolas <brouard@homebrou> 659: * imach.c (Repository): Replace "freqsummary" at a correct 660: place. It differs from routine "prevalence" which may be called 661: many times. Probs is memory consuming and must be used with 662: parcimony. 663: 664: 2003-06-17 <brouard@BROUARD> 665: 666: * timeval.h (Module): Added included file to make use of 667: gettimeofday working on win32 with cygwin. 668: 669: 2003-05-16 Brouard Nicolas <brouard@brouard> 670: * imach.c (Module): Insert of a warning if the delay between two 671: waves is negative. 672: 673: * imach.c (Module): 674: 675: 2003-05-03 <brouard@BROUARD> 676: 677: * imach.c: Some cleaning 678: 679: 2003-03-28 <brouard@BROUARD> 680: * imach.c (Module): In version up to 0.92 likelihood was computed 681: as if date of death was unknown. Death was treated as any other 682: health state: the date of the interview describes the actual state 683: and not the date of a change in health state. The former idea was 684: to consider that at each interview the state was recorded 685: (healthy, disable or death) and IMaCh was corrected; but when we 686: introduced the exact date of death then we should have modified 687: the contribution of an exact death to the likelihood. This new 688: contribution is smaller and very dependent of the step unit 689: stepm. It is no more the probability to die between last interview 690: and month of death but the probability to survive from last 691: interview up to one month before death multiplied by the 692: probability to die within a month. Thanks to Chris 693: Jackson for correcting this bug. Former versions increased 694: mortality artificially. The bad side is that we add another loop 695: 696: 697: which slows down the processing. The difference can be up to 10% 698: 699: 700: lower mortality. 701: 702: 703: 704: 705: 706: 2002-05-30 <brouard@BROUARD> 707: 708: 709: 710: 711: 712: * 713: 714: 715: 716: 717: 718: * imach.c (Module): Add correlation matrix of one-step 719: 720: 721: probabilities and covariance matrix 722: 723: 724: 725: 726: