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Thu Feb 11 19:49:33 2021 UTC (3 years, 8 months ago) by brouard
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Summary: results: instead of result: is now an error which is displayed

1: 2021-02-11 Nicolas J Brouard <nbrouard@mac02049.local> 2: 3: * (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed. 4: 5: 2020-02-22 Brouard Nicolas <brouard@brouard.name> 6: 7: * (Module): imach.c Update mle=-3 (for computing Life expectancy 8: and life table from the data without any state) 9: 10: 2019-05-20 Brouard Nicolas <brouard@brouard.name> 11: 12: * version.h: Summary: version 0.99.r19 13: 14: * imach.c: Summary: Projection syntax simplified 15: We can now start projections, forward or backward, from the mean date 16: of inteviews up to or down to a number of years of projection: 17: prevforecast=1 yearsfproj=15.3 mobil_average=0 18: or 19: prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0 20: or 21: prevbackcast=1 yearsbproj=12.3 mobil_average=1 22: or 23: prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1 24: 25: 2019-05-18 Brouard Nicolas <brouard@brouard.name> 26: 27: * imach.c: Summary: doxygen tex bug 28: 29: 2019-05-16 Brouard Nicolas <brouard@brouard.name> 30: 31: * imach.c: Summary: There was some wrong lines added 32: 33: 2019-05-09 Brouard Nicolas <brouard@brouard.name> 34: 35: * Makefile, imach.c: *** empty log message *** 36: 37: * ChangeLog: Summary: C= 38: 39: * imach.c: Summary: Some updates 40: 41: * imach.c: Summary: Before ncovmax 42: 43: * version.h: *** empty log message *** 44: 45: * imach.c: Summary: 0.99r18 unlimited number of individuals 46: The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur. 47: 48: 2018-12-13 Brouard Nicolas <brouard@brouard.name> 49: 50: * imach.c: Summary: Bug for young ages (<-30) will be in r17 51: 52: 2018-12-05 Brouard Nicolas <brouard@brouard.name> 53: 54: * Makefile: Summary: 0.99r16 55: 56: 2018-05-02 Brouard Nicolas <brouard@brouard.name> 57: 58: * imach.c: Summary: Some bugs fixed 59: 60: 2018-05-02 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 61: 62: * imach.c: Summary: Bug for young ages (<-30) will be in r17 63: 64: 2018-05-02 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 65: 66: * imach.c: Summary: Some bugs fixed 67: 68: 2018-05-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 69: 70: * imach.c: 71: Summary: Bug fixed by providing frequencies only for non missing covariates 72: 73: 2018-04-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 74: 75: * imach.c: Summary: some minor bugs 76: 77: 2018-04-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 78: 79: * README.txt: *** empty log message *** 80: 81: * imach.c: Summary: Some bugs fixed, valgrind tested 82: 83: 2018-04-20 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 84: 85: * Makefile, README.txt, setup.iss: Summary: imach 0.99r16 86: 87: * imach.c: 88: Summary: Computing mean and stdeviation of fixed quantitative variables 89: 90: 2018-04-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 91: 92: * imach.c: Summary: Some minor bugs fixed 93: 94: * version.h: *** empty log message *** 95: 96: 2018-02-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 97: 98: * imach.c: *** empty log message *** 99: 100: * imach.c: Summary: Adding second argument for quitting 101: 102: 2018-02-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 103: 104: * Makefile, README.txt, imach.c: Summary: 0.99r15 105: New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c 106: 107: 2017-07-20 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 108: 109: * imach.c: Summary: temporary working 110: 111: 2017-07-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 112: 113: * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?) 114: 115: 2017-07-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 116: 117: * imach.c: Summary: BOM files can be read now 118: 119: 2017-06-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 120: 121: * imach.c: Summary: Graphs improvements 122: 123: * imach.c: Summary: Saito's color 124: 125: 2017-06-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 126: 127: * imach.c: Summary: Version 0.99r14 128: 129: 2017-06-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 130: 131: * imach.c: Summary: More documentation on projections 132: 133: * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow) 134: 135: * imach.c: Summary: Some bug with rint 136: 137: 2017-05-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 138: 139: * imach.c: *** empty log message *** 140: 141: 2017-05-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 142: 143: * imach.c: Summary: Code into subroutine, cleanings 144: 145: 2017-05-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 146: 147: * imach.c: 148: Summary: backprojection and confidence intervals of backprevalence 149: 150: 2017-05-13 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 151: 152: * imach.c: Summary: temporary save for backprojection 153: 154: * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed) 155: 156: 2017-04-26 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 157: 158: * imach.c: Summary: imach 0.99r13 Some bugs fixed 159: 160: * imach.c: Summary: Labels in graphs 161: 162: 2017-04-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 163: 164: * imach.c: Summary: to save 165: 166: 2017-04-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 167: 168: * imach.c: *** empty log message *** 169: 170: 2017-04-05 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 171: 172: * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1 173: 174: 2017-04-04 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 175: 176: * imach.c: Summary: Gnuplot indexations fixed (humm) 177: 178: * imach.c: 179: Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3 180: 181: 2017-04-03 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 182: 183: * imach.c: Summary: Version 0.99r12 184: Some cleanings, conformed with updated documentation. 185: 186: 2017-03-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 187: 188: * version.h: *** empty log message *** 189: 190: * version.h: Summary:0.99r11 191: 192: 2017-03-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 193: 194: * imach.c: Summary: Temp 195: 196: 2017-03-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 197: 198: * imach.c: Summary: Temporary 199: 200: 2017-03-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 201: 202: * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed 203: 204: * imach.c: Summary: Fixing data parameter line 205: 206: 2016-12-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 207: 208: * imach.c: Summary: 0.99 in progress 209: 210: 2016-09-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 211: 212: * imach.c: *** empty log message *** 213: 214: * imach.c: Summary: not working 215: 216: 2016-09-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 217: 218: * imach.c: Summary: continue 219: 220: 2016-09-07 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 221: 222: * imach.c: Summary: Starting values from frequencies 223: 224: * imach.c: *** empty log message *** 225: 226: 2016-09-02 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 227: 228: * imach.c: *** empty log message *** 229: 230: 2016-08-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 231: 232: * imach.c: Summary: Fixing a lots 233: 234: 2016-08-29 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 235: 236: * imach.c: Summary: gnuplot problem in Back projection to fix 237: 238: * imach.c: Summary: Better 239: 240: 2016-08-26 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 241: 242: * imach.c: 243: Summary: Improvement in Powell output in order to copy and paste 244: 245: * imach.c: Summary: Starting tests of 0.99 246: 247: * imach.c: Summary: to valgrind 248: 249: 2016-08-25 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 250: 251: * imach.c: *** empty log message *** 252: 253: 2016-08-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 254: 255: * imach.c: *** empty log message *** 256: 257: * imach.c: Summary: not working 258: 259: 2016-08-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 260: 261: * imach.c: Summary: not working 262: 263: * imach.c: Summary: Not working 264: 265: 2016-07-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 266: 267: * imach.c: Summary: Completing for func too 268: 269: 2016-07-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 270: 271: * imach.c: Summary: Fixing some arrays, still debugging 272: 273: 2016-07-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 274: 275: * imach.c: 276: Summary: 0.99 working (more or less) for Asian Workshop on multitate methods 277: 278: 2016-07-12 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 279: 280: * imach.c: Summary: temp 281: 282: * imach.c: Summary: saving but not running 283: 284: 2016-07-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 285: 286: * imach.c: Summary: Fixes 287: 288: 2016-02-19 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 289: 290: * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7 291: 292: * setup.iss, Makefile, version.h: *** empty log message *** 293: 294: * imach.c: Summary: temporary 295: 296: 2016-02-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 297: 298: * imach.c: Summary: Probably last 0.98 stable version 0.98r6 299: 300: 2016-02-16 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 301: 302: * imach.c: Summary: minor bug 303: 304: * imach.c: Summary: 0.99r2 305: 306: 2016-02-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 307: 308: * imach.c: *** empty log message *** 309: 310: 2016-02-12 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 311: 312: * imach.c: Summary: 0.99 Back projections 313: 314: 2015-12-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 315: 316: * imach.c: Summary: Experimental backcast 317: 318: 2015-12-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 319: 320: * imach.c: Summary: 0.98r4 Warning and status=-2 321: 322: Version 0.98r4 is now: 323: - displaying an error when status is -1, date of interview unknown and date of death known; 324: - permitting a status -2 when the vital status is unknown at a known date of right truncation. 325: Older changes concerning s=-2, dating from 2005 have been supersed. 326: 327: * Makefile: *** empty log message *** 328: 329: 2015-12-16 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 330: 331: * Makefile: *** empty log message *** 332: 333: * imach.c: Summary: 0.98r4 working 334: 335: * Makefile: Summary: linuxrpm added 336: 337: * Makefile: *** empty log message *** 338: 339: * imach.c: Summary: temporary not working 340: 341: 2015-12-11 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 342: 343: * imach.c: Summary: 0.98r4 344: 345: 2015-12-08 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 346: 347: * Makefile: *** empty log message *** 348: 349: 2015-11-21 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 350: 351: * Makefile: 352: Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more 353: 354: * imach.c: Summary: minor typo 355: 356: * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional 357: 358: Author: Nicolas Brouard 359: 360: 2015-11-18 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 361: 362: * imach.c: Summary: Start working on projected prevalences 363: 364: 2015-11-17 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 365: 366: * imach.c: Summary: Adding ftolpl parameter 367: Author: N Brouard 368: 369: We had difficulties to get smoothed confidence intervals. It was due 370: to the period prevalence which wasn't computed accurately. The inner 371: parameter ftolpl is now an outer parameter of the .imach parameter 372: file after estepm. If ftolpl is small 1.e-4 and estepm too, 373: computation are long. 374: 375: * version.h: *** empty log message *** 376: 377: * imach.c: Summary: temporary 378: 379: 2015-10-27 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 380: 381: * Makefile: *** empty log message *** 382: 383: * setup.iss.in: Summary: some new subdirs 384: 385: * imach.c: *** empty log message *** 386: 387: * setup.iss.in: 388: Summary: Adding gnuplot 5.1 with bin and etc for pango fonts 389: 390: 2015-10-24 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 391: 392: * imach.c: *** empty log message *** 393: 394: 2015-10-23 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 395: 396: * imach.c: 397: Summary: 0.98r3 some clarification for graphs on likelihood contributions 398: 399: 2015-10-01 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 400: 401: * imach.c: Summary: Some new graphs of contribution to likelihood 402: 403: 2015-09-30 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 404: 405: * Makefile: 406: Summary: Version read from version.h, itself read with cmake 407: 408: * imach.c: Summary: looking at better estimation of the hessian 409: 410: Also a better criteria for convergence to the period prevalence And 411: therefore adding the number of years needed to converge. (The 412: prevalence in any alive state shold sum to one 413: 414: * Makefile: *** empty log message *** 415: 416: 2015-09-22 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 417: 418: * imach.c: 419: Summary: Adding some overall graph on contribution to likelihood. Might change 420: 421: 2015-09-15 Brouard Nicolas <brouard@brouard-antoine.homelinux.com> 422: 423: * Makefile: *** empty log message *** 424: 425: * imach.c: Summary: 0.98r0 426: 427: - Some new graphs like suvival functions 428: - Some bugs fixed like model=1+age+V2. 429: 430: * ChangeLog, Makefile: Summary: 0.98r0 431: 432: * CMakeLists.txt: Summary: Some tests for setup.iss 433: 434: 2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr> 435: 436: * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc 437: 438: 2015-08-18 Nicolas J Brouard <nbrouard@tugault.local> 439: 440: * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line. 441: 442: 2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr> 443: 444: * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih) 445: 446: 2014-12-16 Nicolas J Brouard <nbrouard@tugault.local> 447: 448: * imach.c (Module): Merging 1.61 to 1.162 449: 450: 2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr> 451: 452: * prevlim.h (Module): 453: 454: 2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local> 455: 456: * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested... 457: (Module): Version 0.98nR Running ok, but output format still only works for three covariates. 458: 459: 2010-04-29 brouard <brouard@ined.fr> 460: 461: * imach.c (Module): Checking covariates for more complex models 462: than V1+V2. A lot of change to be done. Unstable. 463: 464: 2010-04-26 brouard <brouard@ined.fr> 465: 466: * imach.c (Module): merging some libgsl code. Fixing computation 467: of likelione (using inter/intrapolation if mle = 0) in order to 468: get same likelihood as if mle=1. 469: Some cleaning of code and comments added. 470: 471: 2009-10-29 brouard <brouard@ined.fr> 472: 473: * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code. 474: 475: 2006-06-30 Brouard Nicolas <brouard@localhost> 476: 477: * imach.c (Module): Clarifications on computing e.j 478: 479: 2006-04-28 Brouard Nicolas <brouard@localhost> 480: 481: * imach.c (Module): Yes the sum of survivors was wrong since 482: imach-114 because nhstepm was no more computed in the age 483: loop. Now we define nhstepma in the age loop. 484: (Module): In order to speed up (in case of numerous covariates) we 485: compute health expectancies (without variances) in a first step 486: and then all the health expectancies with variances or standard 487: deviation (needs data from the Hessian matrices) which slows the 488: computation. 489: In the future we should be able to stop the program is only health 490: expectancies and graph are needed without standard deviations. 491: 492: 2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr> 493: 494: * imach.iss (Module): 495: 496: * imach.c (Module): bugs in evsi + population file added in htm output file 497: 498: 2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr> 499: 500: * imach.c (Module): 501: 502: 2006-03-20 Brouard Nicolas <brouard@localhost> 503: 504: * imach.c (Module): <title> changed, corresponds to .htm file 505: name. <head> headers where missing. 506: 507: * Makefile (Module): 0.98g 508: 509: * imach.c (Module): Weights can have a decimal point as for 510: English (a comma might work with a correct LC_NUMERIC environment, 511: otherwise the weight is truncated). 512: Modification of warning when the covariates values are not 0 or 513: 1. 514: Version 0.98g 515: 516: 2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr> 517: 518: * imach.c (Module): Comments concerning covariates added 519: 520: * noreg-setup.iss (Module): Version 0.98f 521: 522: * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup 523: 524: * imach.c (Module): refinements in the computation of lli if 525: status=-2 in order to have more reliable computation if stepm is 526: not 1 month. Version 0.98f 527: 528: 2006-03-15 Brouard Nicolas <brouard@localhost> 529: 530: * imach.c (Module): Bug if status = -2, the loglikelihood was 531: computed as likelihood omitting the logarithm. Version O.98e 532: 533: 2006-03-14 Brouard Nicolas <brouard@localhost> 534: 535: * imach.c (Module): varevsij Comments added explaining the second 536: table of variances if popbased=1 . 537: (Module): Covariances of eij, ekl added, graphs fixed, new html link. 538: (Module): Function pstamp added 539: (Module): Version 0.98d 540: 541: 2006-03-06 Brouard Nicolas <brouard@localhost> 542: 543: * imach.c (Module): Variance-covariance wrong links and 544: varian-covariance of ej. is needed (Saito). 545: 546: 2006-02-27 Brouard Nicolas <brouard@localhost> 547: 548: * imach.c (Module): One freematrix added in mlikeli! 549: 550: 2006-02-26 Brouard Nicolas <brouard@localhost> 551: 552: * imach.c (Module): Some improvements in processing parameter 553: filename with strsep. 554: 555: 2006-02-24 Brouard Nicolas <brouard@localhost> 556: 557: * imach.c (Module): Memory leaks checks with valgrind and: 558: datafile was not closed, some imatrix were not freed and on matrix 559: allocation too. 560: 561: 2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr> 562: 563: * strsep.c (Module): Inclusion because not in mingw32!!! 564: 565: * setup.iss.in (Module): IMACHSETUPVERSION added 566: 567: * noreg-setup.iss (Module): added to cvs tree 568: 569: * Makefile (Module): IMACHSETUPVERSION added 570: 571: 2006-01-30 BROUARD Nicolas <brouard@localhost> 572: 573: * Makefile (Module, Module): Latest Makefile 574: 575: * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe 576: 577: 2006-01-27 BROUARD Nicolas <brouard@localhost> 578: 579: * noreg-setup.iss (Module): ADDED 580: 581: 2006-01-24 BROUARD Nicolas <brouard@localhost> 582: 583: * imach.c (Module): Comments (lines starting with a #) are allowed in data. 584: 585: 2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr> 586: 587: * Makefile (Module): Added Imach98.pmsp and howto crete a dmg 588: 589: * createdmg.sh (Module): Creates a dmg disk for MaC OS/X 590: 591: 2005-09-30 <lievre@PC_00595> 592: 593: * imach.c (Module): sump fixed, loop imx fixed, and simplifications. 594: (Module): If the status is missing at the last wave but we know 595: that the person is alive, then we can code his/her status as -2 596: (instead of missing=-1 in earlier versions) and his/her 597: contributions to the likelihood is 1 - Prob of dying from last 598: health status (= 1-p13= p11+p12 in the easiest case of somebody in 599: the healthy state at last known wave). Version is 0.98 600: 601: 2004-05-20 Brouard Nicolas <brouard@localhost> 602: 603: * imach.c (Repository): 604: Agnes added a direct estimation of mortality (without the need of 605: computing period prevalence and differential mortality). Thus here 606: is version 0.97a which has been distributed to some people at 607: REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of 608: mortality using covariates is not done today. Estimating direct 609: mortality is a very different process because it doesn't need 610: interpolation because it is easy to get the lx from the force of 611: the mortality mux in the simplest case as for a Gompertz (log mux 612: = a + b*x . But we have been able to incorporate the new code 613: within former imach program (0.96d) without deteriorating too much 614: the understanding of the program. 615: 616: 2003-06-25 <brouard@BROUARD> 617: 618: * imach.c (Module): On windows (cygwin) function asctime_r doesn't 619: exist so I changed back to asctime which exists. 620: (Module): Version 0.96b 621: 622: 2003-06-24 <brouard@BROUARD> 623: 624: * imach.c (Module): Some bugs corrected for windows. Also, when 625: mle=-1 a template is output in file "or"mypar.txt with the design 626: of the covariance matrix to be input. 627: 628: 2003-06-25 Brouard Nicolas <brouard@homebrou> 629: 630: * imach.c (Repository): Duplicated warning errors corrected. 631: (Repository): Elapsed time after each iteration is now output. It 632: helps to forecast when convergence will be reached. Elapsed time 633: is stamped in powell. We created a new html file for the graphs 634: concerning matrix of covariance. It has extension -cov.htm. 635: 636: 2003-06-23 Brouard Nicolas <brouard@homebrou> 637: 638: * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things. 639: 640: 2003-06-18 Brouard Nicolas <brouard@homebrou> 641: 642: * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96 643: 644: 2003-06-17 Brouard Nicolas <brouard@homebrou> 645: 646: 647: * imach.c (Repository): Check when date of death was earlier that 648: current date of interview. It may happen when the death was just 649: prior to the death. In this case, dh was negative and likelihood 650: was wrong (infinity). We still send an "Error" but patch by 651: assuming that the date of death was just one stepm after the 652: interview. 653: (Repository): Because some people have very long ID (first column) 654: we changed int to long in num[] and we added a new lvector for 655: memory allocation. But we also truncated to 8 characters (left 656: truncation) 657: 658: (Repository): No more line truncation errors. 659: 660: 2003-06-14 Brouard Nicolas <brouard@homebrou> 661: 662: * imach.c (Repository): Add of a routine likelione (likelihood 663: only once) which prints on a text file 664: (ilk) the contributions to the likelihood for each 665: individual/wave. 666: 667: 2003-06-13 Brouard Nicolas <brouard@homebrou> 668: * imach.c (Repository): Replace "freqsummary" at a correct 669: place. It differs from routine "prevalence" which may be called 670: many times. Probs is memory consuming and must be used with 671: parcimony. 672: 673: 2003-06-17 <brouard@BROUARD> 674: 675: * timeval.h (Module): Added included file to make use of 676: gettimeofday working on win32 with cygwin. 677: 678: 2003-05-16 Brouard Nicolas <brouard@brouard> 679: * imach.c (Module): Insert of a warning if the delay between two 680: waves is negative. 681: 682: * imach.c (Module): 683: 684: 2003-05-03 <brouard@BROUARD> 685: 686: * imach.c: Some cleaning 687: 688: 2003-03-28 <brouard@BROUARD> 689: * imach.c (Module): In version up to 0.92 likelihood was computed 690: as if date of death was unknown. Death was treated as any other 691: health state: the date of the interview describes the actual state 692: and not the date of a change in health state. The former idea was 693: to consider that at each interview the state was recorded 694: (healthy, disable or death) and IMaCh was corrected; but when we 695: introduced the exact date of death then we should have modified 696: the contribution of an exact death to the likelihood. This new 697: contribution is smaller and very dependent of the step unit 698: stepm. It is no more the probability to die between last interview 699: and month of death but the probability to survive from last 700: interview up to one month before death multiplied by the 701: probability to die within a month. Thanks to Chris 702: Jackson for correcting this bug. Former versions increased 703: mortality artificially. The bad side is that we add another loop 704: 705: 706: which slows down the processing. The difference can be up to 10% 707: 708: 709: lower mortality. 710: 711: 712: 713: 714: 715: 2002-05-30 <brouard@BROUARD> 716: 717: 718: 719: 720: 721: * 722: 723: 724: 725: 726: 727: * imach.c (Module): Add correlation matrix of one-step 728: 729: 730: probabilities and covariance matrix 731: 732: 733: 734: 735: