File:  [Local Repository] / imach / src / ChangeLog
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Sat Feb 20 15:28:54 2021 UTC (3 years, 8 months ago) by brouard
Branches: MAIN
CVS tags: HEAD
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    1: 2021-02-20  Nicolas Brouard   <brouard@ined.fr>
    2: 
    3: 	* imach.c (Module): Fix bug on quitting after result lines!
    4: 
    5: 2021-02-12  Nicolas Brouard   <brouard@ined.fr>
    6: 
    7: 	* imach.c (Module): The use of a Windows BOM (huge) file is now an error
    8: 
    9: 
   10: 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
   11: 
   12: 	*  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
   13: 
   14: 2020-02-22  Brouard Nicolas  <brouard@ined.fr>
   15: 
   16: 	*  (Module): imach.c Update mle=-3 (for computing Life expectancy
   17: 	and life table from the data without any state)
   18: 
   19: 2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   20: 
   21: 	* version.h: Summary: version 0.99.r19
   22: 
   23: 	* imach.c: Summary: Projection syntax simplified
   24: 	We can now start projections, forward or backward, from the mean date
   25: 	of inteviews up to or down to a number of years of projection:
   26: 	prevforecast=1 yearsfproj=15.3 mobil_average=0
   27: 	or
   28: 	prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
   29: 	or
   30: 	prevbackcast=1 yearsbproj=12.3 mobil_average=1
   31: 	or
   32: 	prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   33: 
   34: 2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   35: 
   36: 	* imach.c: Summary: doxygen tex bug
   37: 
   38: 2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   39: 
   40: 	* imach.c: Summary: There was some wrong lines added
   41: 
   42: 2019-05-09  Brouard Nicolas  <brouard@ined.fr>
   43: 
   44: 	* Makefile, imach.c: *** empty log message ***
   45: 
   46: 	* ChangeLog: Summary: C=
   47: 
   48: 	* imach.c: Summary: Some updates
   49: 
   50: 	* imach.c: Summary: Before ncovmax
   51: 
   52: 	* version.h: *** empty log message ***
   53: 
   54: 	* imach.c: Summary: 0.99r18 unlimited number of individuals
   55: 	The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   56: 
   57: 2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   58: 
   59: 	* imach.c: Summary: Bug for young ages (<-30) will be in r17
   60: 
   61: 2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   62: 
   63: 	* Makefile: Summary: 0.99r16
   64: 
   65: 2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   66: 
   67: 	* imach.c: Summary: Some bugs fixed
   68: 
   69: 2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   70: 
   71: 	* imach.c:  Summary: Bug for young ages (<-30) will be in r17
   72: 
   73: 2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   74: 
   75: 	* imach.c: Summary: Some bugs fixed
   76: 
   77: 2018-05-01  Brouard Nicolas  <brouard@ined.fr>
   78: 
   79: 	* imach.c:
   80: 	Summary: Bug fixed by providing frequencies only for non missing covariates
   81: 
   82: 2018-04-27  Brouard Nicolas  <brouard@ined.fr>
   83: 
   84: 	* imach.c: Summary: some minor bugs
   85: 
   86: 2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   87: 
   88: 	* README.txt: *** empty log message ***
   89: 
   90: 	* imach.c: Summary: Some bugs fixed, valgrind tested
   91: 
   92: 2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   93: 
   94: 	* Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   95: 
   96: 	* imach.c:
   97: 	Summary: Computing mean and stdeviation of fixed quantitative variables
   98: 
   99: 2018-04-19  Brouard Nicolas  <brouard@ined.fr>
  100: 
  101: 	* imach.c: Summary: Some minor bugs fixed
  102: 
  103: 	* version.h: *** empty log message ***
  104: 
  105: 2018-02-27  Brouard Nicolas  <brouard@ined.fr>
  106: 
  107: 	* imach.c: *** empty log message ***
  108: 
  109: 	* imach.c: Summary: Adding second argument for quitting
  110: 
  111: 2018-02-21  Brouard Nicolas  <brouard@ined.fr>
  112: 
  113: 	* Makefile, README.txt, imach.c: Summary: 0.99r15
  114: 	New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
  115: 
  116: 2017-07-20  Brouard Nicolas  <brouard@ined.fr>
  117: 
  118: 	* imach.c: Summary: temporary working
  119: 
  120: 2017-07-19  Brouard Nicolas  <brouard@ined.fr>
  121: 
  122: 	* imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
  123: 
  124: 2017-07-17  Brouard Nicolas  <brouard@ined.fr>
  125: 
  126: 	* imach.c: Summary: BOM files can be read now
  127: 
  128: 2017-06-30  Brouard Nicolas  <brouard@ined.fr>
  129: 
  130: 	* imach.c: Summary: Graphs improvements
  131: 
  132: 	* imach.c: Summary: Saito's color
  133: 
  134: 2017-06-29  Brouard Nicolas  <brouard@ined.fr>
  135: 
  136: 	* imach.c: Summary: Version 0.99r14
  137: 
  138: 2017-06-27  Brouard Nicolas  <brouard@ined.fr>
  139: 
  140: 	* imach.c: Summary: More documentation on projections
  141: 
  142: 	* imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
  143: 
  144: 	* imach.c: Summary: Some bug with rint
  145: 
  146: 2017-05-24  Brouard Nicolas  <brouard@ined.fr>
  147: 
  148: 	* imach.c: *** empty log message ***
  149: 
  150: 2017-05-23  Brouard Nicolas  <brouard@ined.fr>
  151: 
  152: 	* imach.c: Summary: Code into subroutine, cleanings
  153: 
  154: 2017-05-18  Brouard Nicolas  <brouard@ined.fr>
  155: 
  156: 	* imach.c:
  157: 	Summary: backprojection and confidence intervals of backprevalence
  158: 
  159: 2017-05-13  Brouard Nicolas  <brouard@ined.fr>
  160: 
  161: 	* imach.c: Summary: temporary save for backprojection
  162: 
  163: 	* imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
  164: 
  165: 2017-04-26  Brouard Nicolas  <brouard@ined.fr>
  166: 
  167: 	* imach.c: Summary: imach 0.99r13 Some bugs fixed
  168: 
  169: 	* imach.c: Summary: Labels in graphs
  170: 
  171: 2017-04-24  Brouard Nicolas  <brouard@ined.fr>
  172: 
  173: 	* imach.c: Summary: to save
  174: 
  175: 2017-04-18  Brouard Nicolas  <brouard@ined.fr>
  176: 
  177: 	* imach.c: *** empty log message ***
  178: 
  179: 2017-04-05  Brouard Nicolas  <brouard@ined.fr>
  180: 
  181: 	* imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
  182: 
  183: 2017-04-04  Brouard Nicolas  <brouard@ined.fr>
  184: 
  185: 	* imach.c: Summary: Gnuplot indexations fixed (humm)
  186: 
  187: 	* imach.c:
  188: 	Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
  189: 
  190: 2017-04-03  Brouard Nicolas  <brouard@ined.fr>
  191: 
  192: 	* imach.c: Summary: Version 0.99r12
  193: 	Some cleanings, conformed with updated documentation.
  194: 
  195: 2017-03-30  Brouard Nicolas  <brouard@ined.fr>
  196: 
  197: 	* version.h: *** empty log message ***
  198: 
  199: 	* version.h: Summary:0.99r11
  200: 
  201: 2017-03-29  Brouard Nicolas  <brouard@ined.fr>
  202: 
  203: 	* imach.c: Summary: Temp
  204: 
  205: 2017-03-27  Brouard Nicolas  <brouard@ined.fr>
  206: 
  207: 	* imach.c: Summary: Temporary
  208: 
  209: 2017-03-08  Brouard Nicolas  <brouard@ined.fr>
  210: 
  211: 	* imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
  212: 
  213: 	* imach.c: Summary: Fixing data parameter line
  214: 
  215: 2016-12-15  Brouard Nicolas  <brouard@ined.fr>
  216: 
  217: 	* imach.c: Summary: 0.99 in progress
  218: 
  219: 2016-09-15  Brouard Nicolas  <brouard@ined.fr>
  220: 
  221: 	* imach.c: *** empty log message ***
  222: 
  223: 	* imach.c: Summary: not working
  224: 
  225: 2016-09-08  Brouard Nicolas  <brouard@ined.fr>
  226: 
  227: 	* imach.c: Summary: continue
  228: 
  229: 2016-09-07  Brouard Nicolas  <brouard@ined.fr>
  230: 
  231: 	* imach.c: Summary: Starting values from frequencies
  232: 
  233: 	* imach.c: *** empty log message ***
  234: 
  235: 2016-09-02  Brouard Nicolas  <brouard@ined.fr>
  236: 
  237: 	* imach.c: *** empty log message ***
  238: 
  239: 2016-08-30  Brouard Nicolas  <brouard@ined.fr>
  240: 
  241: 	* imach.c: Summary: Fixing a lots
  242: 
  243: 2016-08-29  Brouard Nicolas  <brouard@ined.fr>
  244: 
  245: 	* imach.c: Summary: gnuplot problem in Back projection to fix
  246: 
  247: 	* imach.c: Summary: Better
  248: 
  249: 2016-08-26  Brouard Nicolas  <brouard@ined.fr>
  250: 
  251: 	* imach.c:
  252: 	Summary: Improvement in Powell output in order to copy and paste
  253: 
  254: 	* imach.c: Summary: Starting tests of 0.99
  255: 
  256: 	* imach.c: Summary: to valgrind
  257: 
  258: 2016-08-25  Brouard Nicolas  <brouard@ined.fr>
  259: 
  260: 	* imach.c: *** empty log message ***
  261: 
  262: 2016-08-23  Brouard Nicolas  <brouard@ined.fr>
  263: 
  264: 	* imach.c: *** empty log message ***
  265: 
  266: 	* imach.c: Summary: not working
  267: 
  268: 2016-08-22  Brouard Nicolas  <brouard@ined.fr>
  269: 
  270: 	* imach.c: Summary: not working
  271: 
  272: 	* imach.c: Summary: Not working
  273: 
  274: 2016-07-23  Brouard Nicolas  <brouard@ined.fr>
  275: 
  276: 	* imach.c: Summary: Completing for func too
  277: 
  278: 2016-07-22  Brouard Nicolas  <brouard@ined.fr>
  279: 
  280: 	* imach.c: Summary: Fixing some arrays, still debugging
  281: 
  282: 2016-07-21  Brouard Nicolas  <brouard@ined.fr>
  283: 
  284: 	* imach.c:
  285: 	Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
  286: 
  287: 2016-07-12  Brouard Nicolas  <brouard@ined.fr>
  288: 
  289: 	* imach.c: Summary: temp
  290: 
  291: 	* imach.c: Summary: saving but not running
  292: 
  293: 2016-07-01  Brouard Nicolas  <brouard@ined.fr>
  294: 
  295: 	* imach.c: Summary: Fixes
  296: 
  297: 2016-02-19  Brouard Nicolas  <brouard@ined.fr>
  298: 
  299: 	* imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
  300: 
  301: 	* setup.iss, Makefile, version.h: *** empty log message ***
  302: 
  303: 	* imach.c: Summary: temporary
  304: 
  305: 2016-02-17  Brouard Nicolas  <brouard@ined.fr>
  306: 
  307: 	* imach.c: Summary: Probably last 0.98 stable version 0.98r6
  308: 
  309: 2016-02-16  Brouard Nicolas  <brouard@ined.fr>
  310: 
  311: 	* imach.c: Summary: minor bug
  312: 
  313: 	* imach.c: Summary: 0.99r2
  314: 
  315: 2016-02-15  Brouard Nicolas  <brouard@ined.fr>
  316: 
  317: 	* imach.c: *** empty log message ***
  318: 
  319: 2016-02-12  Brouard Nicolas  <brouard@ined.fr>
  320: 
  321: 	* imach.c: Summary: 0.99 Back projections
  322: 
  323: 2015-12-23  Brouard Nicolas  <brouard@ined.fr>
  324: 
  325: 	* imach.c: Summary: Experimental backcast
  326: 
  327: 2015-12-18  Brouard Nicolas  <brouard@ined.fr>
  328: 
  329: 	* imach.c: Summary: 0.98r4 Warning and status=-2
  330: 
  331: 	Version 0.98r4 is now:
  332: 	 - displaying an error when status is -1, date of interview unknown and date of death known;
  333: 	 - permitting a status -2 when the vital status is unknown at a known date of right truncation.
  334: 	Older changes concerning s=-2, dating from 2005 have been supersed.
  335: 
  336: 	* Makefile: *** empty log message ***
  337: 
  338: 2015-12-16  Brouard Nicolas  <brouard@ined.fr>
  339: 
  340: 	* Makefile: *** empty log message ***
  341: 
  342: 	* imach.c: Summary: 0.98r4 working
  343: 
  344: 	* Makefile: Summary: linuxrpm added
  345: 
  346: 	* Makefile: *** empty log message ***
  347: 
  348: 	* imach.c: Summary: temporary not working
  349: 
  350: 2015-12-11  Brouard Nicolas  <brouard@ined.fr>
  351: 
  352: 	* imach.c: Summary: 0.98r4
  353: 
  354: 2015-12-08  Brouard Nicolas  <brouard@ined.fr>
  355: 
  356: 	* Makefile: *** empty log message ***
  357: 
  358: 2015-11-21  Brouard Nicolas  <brouard@ined.fr>
  359: 
  360: 	* Makefile:
  361: 	Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
  362: 
  363: 	* imach.c: Summary: minor typo
  364: 
  365: 	* imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
  366: 
  367: 	Author: Nicolas Brouard
  368: 
  369: 2015-11-18  Brouard Nicolas  <brouard@ined.fr>
  370: 
  371: 	* imach.c: Summary: Start working on projected prevalences
  372: 
  373: 2015-11-17  Brouard Nicolas  <brouard@ined.fr>
  374: 
  375: 	* imach.c: Summary: Adding ftolpl parameter
  376: 	Author: N Brouard
  377: 
  378: 	We had difficulties to get smoothed confidence intervals. It was due
  379: 	to the period prevalence which wasn't computed accurately. The inner
  380: 	parameter ftolpl is now an outer parameter of the .imach parameter
  381: 	file after estepm. If ftolpl is small 1.e-4 and estepm too,
  382: 	computation are long.
  383: 
  384: 	* version.h: *** empty log message ***
  385: 
  386: 	* imach.c: Summary: temporary
  387: 
  388: 2015-10-27  Brouard Nicolas  <brouard@ined.fr>
  389: 
  390: 	* Makefile: *** empty log message ***
  391: 
  392: 	* setup.iss.in: Summary: some new subdirs
  393: 
  394: 	* imach.c: *** empty log message ***
  395: 
  396: 	* setup.iss.in:
  397: 	Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
  398: 
  399: 2015-10-24  Brouard Nicolas  <brouard@ined.fr>
  400: 
  401: 	* imach.c: *** empty log message ***
  402: 
  403: 2015-10-23  Brouard Nicolas  <brouard@ined.fr>
  404: 
  405: 	* imach.c:
  406: 	Summary: 0.98r3 some clarification for graphs on likelihood contributions
  407: 
  408: 2015-10-01  Brouard Nicolas  <brouard@ined.fr>
  409: 
  410: 	* imach.c: Summary: Some new graphs of contribution to likelihood
  411: 
  412: 2015-09-30  Brouard Nicolas  <brouard@ined.fr>
  413: 
  414: 	* Makefile:
  415: 	Summary: Version read from version.h, itself read with cmake
  416: 
  417: 	* imach.c: Summary: looking at better estimation of the hessian
  418: 
  419: 	Also a better criteria for convergence to the period prevalence And
  420: 	therefore adding the number of years needed to converge. (The
  421: 	prevalence in any alive state shold sum to one
  422: 
  423: 	* Makefile: *** empty log message ***
  424: 
  425: 2015-09-22  Brouard Nicolas  <brouard@ined.fr>
  426: 
  427: 	* imach.c:
  428: 	Summary: Adding some overall graph on contribution to likelihood. Might change
  429: 
  430: 2015-09-15  Brouard Nicolas  <brouard@ined.fr>
  431: 
  432: 	* Makefile: *** empty log message ***
  433: 
  434: 	* imach.c: Summary: 0.98r0
  435: 
  436: 	- Some new graphs like suvival functions
  437: 	- Some bugs fixed like model=1+age+V2.
  438: 
  439: 	* ChangeLog, Makefile: Summary: 0.98r0
  440: 
  441: 	* CMakeLists.txt: Summary: Some tests for setup.iss
  442: 
  443: 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
  444: 
  445: 	*  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
  446: 
  447: 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
  448: 
  449: 	*  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
  450: 
  451: 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
  452: 
  453: 	*  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
  454: 
  455: 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
  456: 
  457: 	* imach.c (Module): Merging 1.61 to 1.162
  458: 
  459: 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
  460: 
  461: 	* prevlim.h (Module): 
  462: 
  463: 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
  464: 
  465: 	* imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
  466: 	(Module): Version 0.98nR Running ok, but output format still only works for three covariates.
  467: 
  468: 2010-04-29  brouard  <brouard@ined.fr>
  469: 
  470: 	* imach.c (Module): Checking covariates for more complex models
  471: 	than V1+V2. A lot of change to be done. Unstable.
  472: 
  473: 2010-04-26  brouard  <brouard@ined.fr>
  474: 
  475: 	* imach.c (Module): merging some libgsl code. Fixing computation
  476: 	of likelione (using inter/intrapolation if mle = 0) in order to
  477: 	get same likelihood as if mle=1.
  478: 	Some cleaning of code and comments added.
  479: 
  480: 2009-10-29  brouard  <brouard@ined.fr>
  481: 
  482: 	* imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
  483: 
  484: 2006-06-30  Brouard Nicolas  <brouard@localhost>
  485: 
  486: 	* imach.c (Module): Clarifications on computing e.j
  487: 
  488: 2006-04-28  Brouard Nicolas  <brouard@localhost>
  489: 
  490: 	* imach.c (Module): Yes the sum of survivors was wrong since
  491: 	imach-114 because nhstepm was no more computed in the age
  492: 	loop. Now we define nhstepma in the age loop.
  493: 	(Module): In order to speed up (in case of numerous covariates) we
  494: 	compute health expectancies (without variances) in a first step
  495: 	and then all the health expectancies with variances or standard
  496: 	deviation (needs data from the Hessian matrices) which slows the
  497: 	computation.
  498: 	In the future we should be able to stop the program is only health
  499: 	expectancies and graph are needed without standard deviations.
  500: 
  501: 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
  502: 
  503: 	* imach.iss (Module): 
  504: 
  505: 	* imach.c (Module): bugs in evsi + population file added in htm output file
  506: 
  507: 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
  508: 
  509: 	* imach.c (Module): 
  510: 
  511: 2006-03-20  Brouard Nicolas  <brouard@localhost>
  512: 
  513: 	* imach.c (Module): <title> changed, corresponds to .htm file
  514: 	name. <head> headers where missing.
  515: 
  516: 	* Makefile (Module): 0.98g
  517: 
  518: 	* imach.c (Module): Weights can have a decimal point as for
  519: 	English (a comma might work with a correct LC_NUMERIC environment,
  520: 	otherwise the weight is truncated).
  521: 	Modification of warning when the covariates values are not 0 or
  522: 	1. 
  523: 	Version 0.98g
  524: 
  525: 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
  526: 
  527: 	* imach.c (Module): Comments concerning covariates added
  528: 
  529: 	* noreg-setup.iss (Module): Version 0.98f
  530: 
  531: 	* Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
  532: 
  533: 	* imach.c (Module): refinements in the computation of lli if
  534: 	status=-2 in order to have more reliable computation if stepm is
  535: 	not 1 month. Version 0.98f
  536: 
  537: 2006-03-15  Brouard Nicolas  <brouard@localhost>
  538: 
  539: 	* imach.c (Module): Bug if status = -2, the loglikelihood was
  540: 	computed as likelihood omitting the logarithm. Version O.98e
  541: 
  542: 2006-03-14  Brouard Nicolas  <brouard@localhost>
  543: 
  544: 	* imach.c (Module): varevsij Comments added explaining the second
  545: 	table of variances if popbased=1 .
  546: 	(Module): Covariances of eij, ekl added, graphs fixed, new html link.
  547: 	(Module): Function pstamp added
  548: 	(Module): Version 0.98d 
  549: 
  550: 2006-03-06  Brouard Nicolas  <brouard@localhost>
  551: 
  552: 	* imach.c (Module): Variance-covariance wrong links and
  553: 	varian-covariance of ej. is needed (Saito).
  554: 
  555: 2006-02-27  Brouard Nicolas  <brouard@localhost>
  556: 
  557: 	* imach.c (Module): One freematrix added in mlikeli!
  558: 
  559: 2006-02-26  Brouard Nicolas  <brouard@localhost>
  560: 
  561: 	* imach.c (Module): Some improvements in processing parameter
  562: 	filename with strsep.
  563: 
  564: 2006-02-24  Brouard Nicolas  <brouard@localhost>
  565: 
  566: 	* imach.c (Module): Memory leaks checks with valgrind and:
  567: 	datafile was not closed, some imatrix were not freed and on matrix
  568: 	allocation too.
  569: 
  570: 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
  571: 
  572: 	* strsep.c (Module): Inclusion because not in mingw32!!!
  573: 
  574: 	* setup.iss.in (Module): IMACHSETUPVERSION added
  575: 
  576: 	* noreg-setup.iss (Module): added to cvs tree
  577: 
  578: 	* Makefile (Module): IMACHSETUPVERSION added
  579: 
  580: 2006-01-30  BROUARD Nicolas  <brouard@localhost>
  581: 
  582: 	* Makefile (Module, Module): Latest Makefile
  583: 
  584: 	* imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
  585: 
  586: 2006-01-27  BROUARD Nicolas  <brouard@localhost>
  587: 
  588: 	* noreg-setup.iss (Module): ADDED
  589: 
  590: 2006-01-24  BROUARD Nicolas  <brouard@localhost>
  591: 
  592: 	* imach.c (Module): Comments (lines starting with a #) are allowed in data.
  593: 
  594: 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
  595: 
  596: 	* Makefile (Module): Added Imach98.pmsp and howto crete a dmg
  597: 
  598: 	* createdmg.sh (Module): Creates a dmg disk for MaC OS/X
  599: 
  600: 2005-09-30    <lievre@PC_00595>
  601: 
  602: 	* imach.c (Module): sump fixed, loop imx fixed, and simplifications.
  603: 	(Module): If the status is missing at the last wave but we know
  604: 	that the person is alive, then we can code his/her status as -2
  605: 	(instead of missing=-1 in earlier versions) and his/her
  606: 	contributions to the likelihood is 1 - Prob of dying from last
  607: 	health status (= 1-p13= p11+p12 in the easiest case of somebody in
  608: 	the healthy state at last known wave). Version is 0.98 
  609: 
  610: 2004-05-20  Brouard Nicolas  <brouard@localhost>
  611: 
  612: 	* imach.c (Repository): 
  613: 	Agnes added a direct estimation of mortality (without the need of
  614: 	computing period prevalence and differential mortality). Thus here
  615: 	is version 0.97a which has been distributed to some people at
  616: 	REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
  617: 	mortality using covariates is not done today. Estimating direct
  618: 	mortality is a very different process because it doesn't need
  619: 	interpolation because it is easy to get the lx from the force of
  620: 	the mortality mux in the simplest case as for a Gompertz (log mux
  621: 	= a + b*x . But we have been able to incorporate the new code
  622: 	within former imach program (0.96d) without deteriorating too much
  623: 	the understanding of the program. 
  624: 
  625: 2003-06-25    <brouard@BROUARD>
  626: 
  627: 	* imach.c (Module): On windows (cygwin) function asctime_r doesn't
  628: 	exist so I changed back to asctime which exists.
  629: 	(Module): Version 0.96b
  630: 
  631: 2003-06-24    <brouard@BROUARD>
  632: 
  633: 	* imach.c (Module): Some bugs corrected for windows. Also, when
  634: 	mle=-1 a template is output in file "or"mypar.txt with the design
  635: 	of the covariance matrix to be input.
  636: 
  637: 2003-06-25  Brouard Nicolas  <brouard@homebrou>
  638: 
  639: 	* imach.c (Repository): Duplicated warning errors corrected.
  640: 	(Repository): Elapsed time after each iteration is now output. It
  641: 	helps to forecast when convergence will be reached. Elapsed time
  642: 	is stamped in powell.  We created a new html file for the graphs
  643: 	concerning matrix of covariance. It has extension -cov.htm.
  644: 
  645: 2003-06-23  Brouard Nicolas  <brouard@homebrou>
  646: 
  647: 	* imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
  648: 
  649: 2003-06-18  Brouard Nicolas  <brouard@homebrou>
  650: 
  651: 	* imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
  652: 
  653: 2003-06-17  Brouard Nicolas  <brouard@homebrou>
  654: 
  655: 
  656: 	* imach.c (Repository): Check when date of death was earlier that
  657: 	current date of interview. It may happen when the death was just
  658: 	prior to the death. In this case, dh was negative and likelihood
  659: 	was wrong (infinity). We still send an "Error" but patch by
  660: 	assuming that the date of death was just one stepm after the
  661: 	interview.
  662: 	(Repository): Because some people have very long ID (first column)
  663: 	we changed int to long in num[] and we added a new lvector for
  664: 	memory allocation. But we also truncated to 8 characters (left
  665: 	truncation)
  666: 
  667: 	(Repository): No more line truncation errors.
  668: 
  669: 2003-06-14  Brouard Nicolas  <brouard@homebrou>
  670: 
  671: 	* imach.c (Repository): Add of a routine likelione (likelihood
  672: 	only once) which prints on a text file
  673: 	(ilk) the contributions to the likelihood for each
  674: 	individual/wave.
  675: 
  676: 2003-06-13  Brouard Nicolas  <brouard@homebrou>
  677: 	* imach.c (Repository): Replace "freqsummary" at a correct
  678: 	place. It differs from routine "prevalence" which may be called
  679: 	many times. Probs is memory consuming and must be used with
  680: 	parcimony.
  681: 
  682: 2003-06-17    <brouard@BROUARD>
  683: 
  684: 	* timeval.h (Module): Added included file to make use of
  685: 	gettimeofday working on win32 with cygwin.
  686: 
  687: 2003-05-16  Brouard Nicolas  <brouard@brouard>
  688: 	* imach.c (Module): Insert of a warning if the delay between two
  689: 	waves is negative.
  690: 
  691: 	* imach.c (Module): 
  692: 
  693: 2003-05-03    <brouard@BROUARD>
  694: 
  695: 	* imach.c: Some cleaning
  696: 
  697: 2003-03-28    <brouard@BROUARD>
  698: 	* imach.c (Module): In version up to 0.92 likelihood was computed
  699: 	as if date of death was unknown. Death was treated as any other
  700: 	health state: the date of the interview describes the actual state
  701: 	and not the date of a change in health state. The former idea was
  702: 	to consider that at each interview the state was recorded
  703: 	(healthy, disable or death) and IMaCh was corrected; but when we
  704: 	introduced the exact date of death then we should have modified
  705: 	the contribution of an exact death to the likelihood. This new
  706: 	contribution is smaller and very dependent of the step unit
  707: 	stepm. It is no more the probability to die between last interview
  708: 	and month of death but the probability to survive from last
  709: 	interview up to one month before death multiplied by the
  710: 	probability to die within a month. Thanks to Chris
  711: 	Jackson for correcting this bug.  Former versions increased
  712: 	mortality artificially. The bad side is that we add another loop
  713: 
  714: 
  715: 	which slows down the processing. The difference can be up to 10%
  716: 
  717: 
  718: 	lower mortality.
  719: 
  720: 
  721: 
  722: 
  723: 
  724: 2002-05-30    <brouard@BROUARD>
  725: 
  726: 
  727: 
  728: 
  729: 
  730: 	* 
  731: 
  732: 
  733: 
  734: 
  735: 
  736: 	* imach.c (Module): Add correlation matrix of one-step
  737: 
  738: 
  739: 	probabilities and covariance matrix
  740: 
  741: 
  742: 
  743: 
  744: 

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