File:  [Local Repository] / imach / src / ChangeLog
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Sat Feb 20 15:45:47 2021 UTC (3 years, 8 months ago) by brouard
Branches: MAIN
CVS tags: HEAD
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    1: 2021-02-20  Nicolas Brouard   <brouard@ined.fr>
    2: 
    3: 	* imach.c (Module): Fix bug on quitting after result lines!
    4: 	(Module): Version 0.99r21
    5: 
    6: 2021-02-12  Nicolas Brouard   <brouard@ined.fr>
    7: 
    8: 	* imach.c (Module): The use of a Windows BOM (huge) file is now an error
    9: 
   10: 
   11: 2021-02-11  Nicolas  Brouard   <brouard@ined.fr>
   12: 
   13: 	*  (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.
   14: 
   15: 2020-02-22  Brouard Nicolas  <brouard@ined.fr>
   16: 
   17: 	*  (Module): imach.c Update mle=-3 (for computing Life expectancy
   18: 	and life table from the data without any state)
   19: 
   20: 2019-05-20  Brouard Nicolas  <brouard@ined.fr>
   21: 
   22: 	* version.h: Summary: version 0.99.r19
   23: 
   24: 	* imach.c: Summary: Projection syntax simplified
   25: 	We can now start projections, forward or backward, from the mean date
   26: 	of inteviews up to or down to a number of years of projection:
   27: 	prevforecast=1 yearsfproj=15.3 mobil_average=0
   28: 	or
   29: 	prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0
   30: 	or
   31: 	prevbackcast=1 yearsbproj=12.3 mobil_average=1
   32: 	or
   33: 	prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1
   34: 
   35: 2019-05-18  Brouard Nicolas  <brouard@ined.fr>
   36: 
   37: 	* imach.c: Summary: doxygen tex bug
   38: 
   39: 2019-05-16  Brouard Nicolas  <brouard@ined.fr>
   40: 
   41: 	* imach.c: Summary: There was some wrong lines added
   42: 
   43: 2019-05-09  Brouard Nicolas  <brouard@ined.fr>
   44: 
   45: 	* Makefile, imach.c: *** empty log message ***
   46: 
   47: 	* ChangeLog: Summary: C=
   48: 
   49: 	* imach.c: Summary: Some updates
   50: 
   51: 	* imach.c: Summary: Before ncovmax
   52: 
   53: 	* version.h: *** empty log message ***
   54: 
   55: 	* imach.c: Summary: 0.99r18 unlimited number of individuals
   56: 	The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.
   57: 
   58: 2018-12-13  Brouard Nicolas  <brouard@ined.fr>
   59: 
   60: 	* imach.c: Summary: Bug for young ages (<-30) will be in r17
   61: 
   62: 2018-12-05  Brouard Nicolas  <brouard@ined.fr>
   63: 
   64: 	* Makefile: Summary: 0.99r16
   65: 
   66: 2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   67: 
   68: 	* imach.c: Summary: Some bugs fixed
   69: 
   70: 2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   71: 
   72: 	* imach.c:  Summary: Bug for young ages (<-30) will be in r17
   73: 
   74: 2018-05-02  Brouard Nicolas  <brouard@ined.fr>
   75: 
   76: 	* imach.c: Summary: Some bugs fixed
   77: 
   78: 2018-05-01  Brouard Nicolas  <brouard@ined.fr>
   79: 
   80: 	* imach.c:
   81: 	Summary: Bug fixed by providing frequencies only for non missing covariates
   82: 
   83: 2018-04-27  Brouard Nicolas  <brouard@ined.fr>
   84: 
   85: 	* imach.c: Summary: some minor bugs
   86: 
   87: 2018-04-21  Brouard Nicolas  <brouard@ined.fr>
   88: 
   89: 	* README.txt: *** empty log message ***
   90: 
   91: 	* imach.c: Summary: Some bugs fixed, valgrind tested
   92: 
   93: 2018-04-20  Brouard Nicolas  <brouard@ined.fr>
   94: 
   95: 	* Makefile, README.txt, setup.iss: Summary: imach 0.99r16
   96: 
   97: 	* imach.c:
   98: 	Summary: Computing mean and stdeviation of fixed quantitative variables
   99: 
  100: 2018-04-19  Brouard Nicolas  <brouard@ined.fr>
  101: 
  102: 	* imach.c: Summary: Some minor bugs fixed
  103: 
  104: 	* version.h: *** empty log message ***
  105: 
  106: 2018-02-27  Brouard Nicolas  <brouard@ined.fr>
  107: 
  108: 	* imach.c: *** empty log message ***
  109: 
  110: 	* imach.c: Summary: Adding second argument for quitting
  111: 
  112: 2018-02-21  Brouard Nicolas  <brouard@ined.fr>
  113: 
  114: 	* Makefile, README.txt, imach.c: Summary: 0.99r15
  115: 	New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c
  116: 
  117: 2017-07-20  Brouard Nicolas  <brouard@ined.fr>
  118: 
  119: 	* imach.c: Summary: temporary working
  120: 
  121: 2017-07-19  Brouard Nicolas  <brouard@ined.fr>
  122: 
  123: 	* imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)
  124: 
  125: 2017-07-17  Brouard Nicolas  <brouard@ined.fr>
  126: 
  127: 	* imach.c: Summary: BOM files can be read now
  128: 
  129: 2017-06-30  Brouard Nicolas  <brouard@ined.fr>
  130: 
  131: 	* imach.c: Summary: Graphs improvements
  132: 
  133: 	* imach.c: Summary: Saito's color
  134: 
  135: 2017-06-29  Brouard Nicolas  <brouard@ined.fr>
  136: 
  137: 	* imach.c: Summary: Version 0.99r14
  138: 
  139: 2017-06-27  Brouard Nicolas  <brouard@ined.fr>
  140: 
  141: 	* imach.c: Summary: More documentation on projections
  142: 
  143: 	* imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)
  144: 
  145: 	* imach.c: Summary: Some bug with rint
  146: 
  147: 2017-05-24  Brouard Nicolas  <brouard@ined.fr>
  148: 
  149: 	* imach.c: *** empty log message ***
  150: 
  151: 2017-05-23  Brouard Nicolas  <brouard@ined.fr>
  152: 
  153: 	* imach.c: Summary: Code into subroutine, cleanings
  154: 
  155: 2017-05-18  Brouard Nicolas  <brouard@ined.fr>
  156: 
  157: 	* imach.c:
  158: 	Summary: backprojection and confidence intervals of backprevalence
  159: 
  160: 2017-05-13  Brouard Nicolas  <brouard@ined.fr>
  161: 
  162: 	* imach.c: Summary: temporary save for backprojection
  163: 
  164: 	* imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)
  165: 
  166: 2017-04-26  Brouard Nicolas  <brouard@ined.fr>
  167: 
  168: 	* imach.c: Summary: imach 0.99r13 Some bugs fixed
  169: 
  170: 	* imach.c: Summary: Labels in graphs
  171: 
  172: 2017-04-24  Brouard Nicolas  <brouard@ined.fr>
  173: 
  174: 	* imach.c: Summary: to save
  175: 
  176: 2017-04-18  Brouard Nicolas  <brouard@ined.fr>
  177: 
  178: 	* imach.c: *** empty log message ***
  179: 
  180: 2017-04-05  Brouard Nicolas  <brouard@ined.fr>
  181: 
  182: 	* imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1
  183: 
  184: 2017-04-04  Brouard Nicolas  <brouard@ined.fr>
  185: 
  186: 	* imach.c: Summary: Gnuplot indexations fixed (humm)
  187: 
  188: 	* imach.c:
  189: 	Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3
  190: 
  191: 2017-04-03  Brouard Nicolas  <brouard@ined.fr>
  192: 
  193: 	* imach.c: Summary: Version 0.99r12
  194: 	Some cleanings, conformed with updated documentation.
  195: 
  196: 2017-03-30  Brouard Nicolas  <brouard@ined.fr>
  197: 
  198: 	* version.h: *** empty log message ***
  199: 
  200: 	* version.h: Summary:0.99r11
  201: 
  202: 2017-03-29  Brouard Nicolas  <brouard@ined.fr>
  203: 
  204: 	* imach.c: Summary: Temp
  205: 
  206: 2017-03-27  Brouard Nicolas  <brouard@ined.fr>
  207: 
  208: 	* imach.c: Summary: Temporary
  209: 
  210: 2017-03-08  Brouard Nicolas  <brouard@ined.fr>
  211: 
  212: 	* imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed
  213: 
  214: 	* imach.c: Summary: Fixing data parameter line
  215: 
  216: 2016-12-15  Brouard Nicolas  <brouard@ined.fr>
  217: 
  218: 	* imach.c: Summary: 0.99 in progress
  219: 
  220: 2016-09-15  Brouard Nicolas  <brouard@ined.fr>
  221: 
  222: 	* imach.c: *** empty log message ***
  223: 
  224: 	* imach.c: Summary: not working
  225: 
  226: 2016-09-08  Brouard Nicolas  <brouard@ined.fr>
  227: 
  228: 	* imach.c: Summary: continue
  229: 
  230: 2016-09-07  Brouard Nicolas  <brouard@ined.fr>
  231: 
  232: 	* imach.c: Summary: Starting values from frequencies
  233: 
  234: 	* imach.c: *** empty log message ***
  235: 
  236: 2016-09-02  Brouard Nicolas  <brouard@ined.fr>
  237: 
  238: 	* imach.c: *** empty log message ***
  239: 
  240: 2016-08-30  Brouard Nicolas  <brouard@ined.fr>
  241: 
  242: 	* imach.c: Summary: Fixing a lots
  243: 
  244: 2016-08-29  Brouard Nicolas  <brouard@ined.fr>
  245: 
  246: 	* imach.c: Summary: gnuplot problem in Back projection to fix
  247: 
  248: 	* imach.c: Summary: Better
  249: 
  250: 2016-08-26  Brouard Nicolas  <brouard@ined.fr>
  251: 
  252: 	* imach.c:
  253: 	Summary: Improvement in Powell output in order to copy and paste
  254: 
  255: 	* imach.c: Summary: Starting tests of 0.99
  256: 
  257: 	* imach.c: Summary: to valgrind
  258: 
  259: 2016-08-25  Brouard Nicolas  <brouard@ined.fr>
  260: 
  261: 	* imach.c: *** empty log message ***
  262: 
  263: 2016-08-23  Brouard Nicolas  <brouard@ined.fr>
  264: 
  265: 	* imach.c: *** empty log message ***
  266: 
  267: 	* imach.c: Summary: not working
  268: 
  269: 2016-08-22  Brouard Nicolas  <brouard@ined.fr>
  270: 
  271: 	* imach.c: Summary: not working
  272: 
  273: 	* imach.c: Summary: Not working
  274: 
  275: 2016-07-23  Brouard Nicolas  <brouard@ined.fr>
  276: 
  277: 	* imach.c: Summary: Completing for func too
  278: 
  279: 2016-07-22  Brouard Nicolas  <brouard@ined.fr>
  280: 
  281: 	* imach.c: Summary: Fixing some arrays, still debugging
  282: 
  283: 2016-07-21  Brouard Nicolas  <brouard@ined.fr>
  284: 
  285: 	* imach.c:
  286: 	Summary: 0.99 working (more or less) for Asian Workshop on multitate methods
  287: 
  288: 2016-07-12  Brouard Nicolas  <brouard@ined.fr>
  289: 
  290: 	* imach.c: Summary: temp
  291: 
  292: 	* imach.c: Summary: saving but not running
  293: 
  294: 2016-07-01  Brouard Nicolas  <brouard@ined.fr>
  295: 
  296: 	* imach.c: Summary: Fixes
  297: 
  298: 2016-02-19  Brouard Nicolas  <brouard@ined.fr>
  299: 
  300: 	* imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7
  301: 
  302: 	* setup.iss, Makefile, version.h: *** empty log message ***
  303: 
  304: 	* imach.c: Summary: temporary
  305: 
  306: 2016-02-17  Brouard Nicolas  <brouard@ined.fr>
  307: 
  308: 	* imach.c: Summary: Probably last 0.98 stable version 0.98r6
  309: 
  310: 2016-02-16  Brouard Nicolas  <brouard@ined.fr>
  311: 
  312: 	* imach.c: Summary: minor bug
  313: 
  314: 	* imach.c: Summary: 0.99r2
  315: 
  316: 2016-02-15  Brouard Nicolas  <brouard@ined.fr>
  317: 
  318: 	* imach.c: *** empty log message ***
  319: 
  320: 2016-02-12  Brouard Nicolas  <brouard@ined.fr>
  321: 
  322: 	* imach.c: Summary: 0.99 Back projections
  323: 
  324: 2015-12-23  Brouard Nicolas  <brouard@ined.fr>
  325: 
  326: 	* imach.c: Summary: Experimental backcast
  327: 
  328: 2015-12-18  Brouard Nicolas  <brouard@ined.fr>
  329: 
  330: 	* imach.c: Summary: 0.98r4 Warning and status=-2
  331: 
  332: 	Version 0.98r4 is now:
  333: 	 - displaying an error when status is -1, date of interview unknown and date of death known;
  334: 	 - permitting a status -2 when the vital status is unknown at a known date of right truncation.
  335: 	Older changes concerning s=-2, dating from 2005 have been supersed.
  336: 
  337: 	* Makefile: *** empty log message ***
  338: 
  339: 2015-12-16  Brouard Nicolas  <brouard@ined.fr>
  340: 
  341: 	* Makefile: *** empty log message ***
  342: 
  343: 	* imach.c: Summary: 0.98r4 working
  344: 
  345: 	* Makefile: Summary: linuxrpm added
  346: 
  347: 	* Makefile: *** empty log message ***
  348: 
  349: 	* imach.c: Summary: temporary not working
  350: 
  351: 2015-12-11  Brouard Nicolas  <brouard@ined.fr>
  352: 
  353: 	* imach.c: Summary: 0.98r4
  354: 
  355: 2015-12-08  Brouard Nicolas  <brouard@ined.fr>
  356: 
  357: 	* Makefile: *** empty log message ***
  358: 
  359: 2015-11-21  Brouard Nicolas  <brouard@ined.fr>
  360: 
  361: 	* Makefile:
  362: 	Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more
  363: 
  364: 	* imach.c: Summary: minor typo
  365: 
  366: 	* imach.c: Summary: 0.98r3 with some graph of projected cross-sectional
  367: 
  368: 	Author: Nicolas Brouard
  369: 
  370: 2015-11-18  Brouard Nicolas  <brouard@ined.fr>
  371: 
  372: 	* imach.c: Summary: Start working on projected prevalences
  373: 
  374: 2015-11-17  Brouard Nicolas  <brouard@ined.fr>
  375: 
  376: 	* imach.c: Summary: Adding ftolpl parameter
  377: 	Author: N Brouard
  378: 
  379: 	We had difficulties to get smoothed confidence intervals. It was due
  380: 	to the period prevalence which wasn't computed accurately. The inner
  381: 	parameter ftolpl is now an outer parameter of the .imach parameter
  382: 	file after estepm. If ftolpl is small 1.e-4 and estepm too,
  383: 	computation are long.
  384: 
  385: 	* version.h: *** empty log message ***
  386: 
  387: 	* imach.c: Summary: temporary
  388: 
  389: 2015-10-27  Brouard Nicolas  <brouard@ined.fr>
  390: 
  391: 	* Makefile: *** empty log message ***
  392: 
  393: 	* setup.iss.in: Summary: some new subdirs
  394: 
  395: 	* imach.c: *** empty log message ***
  396: 
  397: 	* setup.iss.in:
  398: 	Summary: Adding gnuplot 5.1 with bin and etc for pango fonts
  399: 
  400: 2015-10-24  Brouard Nicolas  <brouard@ined.fr>
  401: 
  402: 	* imach.c: *** empty log message ***
  403: 
  404: 2015-10-23  Brouard Nicolas  <brouard@ined.fr>
  405: 
  406: 	* imach.c:
  407: 	Summary: 0.98r3 some clarification for graphs on likelihood contributions
  408: 
  409: 2015-10-01  Brouard Nicolas  <brouard@ined.fr>
  410: 
  411: 	* imach.c: Summary: Some new graphs of contribution to likelihood
  412: 
  413: 2015-09-30  Brouard Nicolas  <brouard@ined.fr>
  414: 
  415: 	* Makefile:
  416: 	Summary: Version read from version.h, itself read with cmake
  417: 
  418: 	* imach.c: Summary: looking at better estimation of the hessian
  419: 
  420: 	Also a better criteria for convergence to the period prevalence And
  421: 	therefore adding the number of years needed to converge. (The
  422: 	prevalence in any alive state shold sum to one
  423: 
  424: 	* Makefile: *** empty log message ***
  425: 
  426: 2015-09-22  Brouard Nicolas  <brouard@ined.fr>
  427: 
  428: 	* imach.c:
  429: 	Summary: Adding some overall graph on contribution to likelihood. Might change
  430: 
  431: 2015-09-15  Brouard Nicolas  <brouard@ined.fr>
  432: 
  433: 	* Makefile: *** empty log message ***
  434: 
  435: 	* imach.c: Summary: 0.98r0
  436: 
  437: 	- Some new graphs like suvival functions
  438: 	- Some bugs fixed like model=1+age+V2.
  439: 
  440: 	* ChangeLog, Makefile: Summary: 0.98r0
  441: 
  442: 	* CMakeLists.txt: Summary: Some tests for setup.iss
  443: 
  444: 2015-09-15  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
  445: 
  446: 	*  (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc
  447: 
  448: 2015-08-18  Nicolas J Brouard   <nbrouard@tugault.local>
  449: 
  450: 	*  (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.
  451: 
  452: 2015-08-03  Nicolas J Brouard   <nbrouard@tugault.ined.fr>
  453: 
  454: 	*  (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)
  455: 
  456: 2014-12-16  Nicolas J Brouard   <nbrouard@tugault.local>
  457: 
  458: 	* imach.c (Module): Merging 1.61 to 1.162
  459: 
  460: 2014-09-02  Nicolas J Brouard   <nbrouard@njbrouard.ined.fr>
  461: 
  462: 	* prevlim.h (Module): 
  463: 
  464: 2014-01-26  Nicolas J Brouard   <nbrouard@ledermann-2.local>
  465: 
  466: 	* imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...
  467: 	(Module): Version 0.98nR Running ok, but output format still only works for three covariates.
  468: 
  469: 2010-04-29  brouard  <brouard@ined.fr>
  470: 
  471: 	* imach.c (Module): Checking covariates for more complex models
  472: 	than V1+V2. A lot of change to be done. Unstable.
  473: 
  474: 2010-04-26  brouard  <brouard@ined.fr>
  475: 
  476: 	* imach.c (Module): merging some libgsl code. Fixing computation
  477: 	of likelione (using inter/intrapolation if mle = 0) in order to
  478: 	get same likelihood as if mle=1.
  479: 	Some cleaning of code and comments added.
  480: 
  481: 2009-10-29  brouard  <brouard@ined.fr>
  482: 
  483: 	* imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.
  484: 
  485: 2006-06-30  Brouard Nicolas  <brouard@localhost>
  486: 
  487: 	* imach.c (Module): Clarifications on computing e.j
  488: 
  489: 2006-04-28  Brouard Nicolas  <brouard@localhost>
  490: 
  491: 	* imach.c (Module): Yes the sum of survivors was wrong since
  492: 	imach-114 because nhstepm was no more computed in the age
  493: 	loop. Now we define nhstepma in the age loop.
  494: 	(Module): In order to speed up (in case of numerous covariates) we
  495: 	compute health expectancies (without variances) in a first step
  496: 	and then all the health expectancies with variances or standard
  497: 	deviation (needs data from the Hessian matrices) which slows the
  498: 	computation.
  499: 	In the future we should be able to stop the program is only health
  500: 	expectancies and graph are needed without standard deviations.
  501: 
  502: 2006-04-04  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
  503: 
  504: 	* imach.iss (Module): 
  505: 
  506: 	* imach.c (Module): bugs in evsi + population file added in htm output file
  507: 
  508: 2006-03-22  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
  509: 
  510: 	* imach.c (Module): 
  511: 
  512: 2006-03-20  Brouard Nicolas  <brouard@localhost>
  513: 
  514: 	* imach.c (Module): <title> changed, corresponds to .htm file
  515: 	name. <head> headers where missing.
  516: 
  517: 	* Makefile (Module): 0.98g
  518: 
  519: 	* imach.c (Module): Weights can have a decimal point as for
  520: 	English (a comma might work with a correct LC_NUMERIC environment,
  521: 	otherwise the weight is truncated).
  522: 	Modification of warning when the covariates values are not 0 or
  523: 	1. 
  524: 	Version 0.98g
  525: 
  526: 2006-03-16  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
  527: 
  528: 	* imach.c (Module): Comments concerning covariates added
  529: 
  530: 	* noreg-setup.iss (Module): Version 0.98f
  531: 
  532: 	* Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup
  533: 
  534: 	* imach.c (Module): refinements in the computation of lli if
  535: 	status=-2 in order to have more reliable computation if stepm is
  536: 	not 1 month. Version 0.98f
  537: 
  538: 2006-03-15  Brouard Nicolas  <brouard@localhost>
  539: 
  540: 	* imach.c (Module): Bug if status = -2, the loglikelihood was
  541: 	computed as likelihood omitting the logarithm. Version O.98e
  542: 
  543: 2006-03-14  Brouard Nicolas  <brouard@localhost>
  544: 
  545: 	* imach.c (Module): varevsij Comments added explaining the second
  546: 	table of variances if popbased=1 .
  547: 	(Module): Covariances of eij, ekl added, graphs fixed, new html link.
  548: 	(Module): Function pstamp added
  549: 	(Module): Version 0.98d 
  550: 
  551: 2006-03-06  Brouard Nicolas  <brouard@localhost>
  552: 
  553: 	* imach.c (Module): Variance-covariance wrong links and
  554: 	varian-covariance of ej. is needed (Saito).
  555: 
  556: 2006-02-27  Brouard Nicolas  <brouard@localhost>
  557: 
  558: 	* imach.c (Module): One freematrix added in mlikeli!
  559: 
  560: 2006-02-26  Brouard Nicolas  <brouard@localhost>
  561: 
  562: 	* imach.c (Module): Some improvements in processing parameter
  563: 	filename with strsep.
  564: 
  565: 2006-02-24  Brouard Nicolas  <brouard@localhost>
  566: 
  567: 	* imach.c (Module): Memory leaks checks with valgrind and:
  568: 	datafile was not closed, some imatrix were not freed and on matrix
  569: 	allocation too.
  570: 
  571: 2006-02-09  LIEVRE Agnes  <lievre@PC_00697.ined.fr>
  572: 
  573: 	* strsep.c (Module): Inclusion because not in mingw32!!!
  574: 
  575: 	* setup.iss.in (Module): IMACHSETUPVERSION added
  576: 
  577: 	* noreg-setup.iss (Module): added to cvs tree
  578: 
  579: 	* Makefile (Module): IMACHSETUPVERSION added
  580: 
  581: 2006-01-30  BROUARD Nicolas  <brouard@localhost>
  582: 
  583: 	* Makefile (Module, Module): Latest Makefile
  584: 
  585: 	* imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe
  586: 
  587: 2006-01-27  BROUARD Nicolas  <brouard@localhost>
  588: 
  589: 	* noreg-setup.iss (Module): ADDED
  590: 
  591: 2006-01-24  BROUARD Nicolas  <brouard@localhost>
  592: 
  593: 	* imach.c (Module): Comments (lines starting with a #) are allowed in data.
  594: 
  595: 2005-10-25  Nicolas Brouard  <brouard@dhcp171.recherche.ined.fr>
  596: 
  597: 	* Makefile (Module): Added Imach98.pmsp and howto crete a dmg
  598: 
  599: 	* createdmg.sh (Module): Creates a dmg disk for MaC OS/X
  600: 
  601: 2005-09-30    <lievre@PC_00595>
  602: 
  603: 	* imach.c (Module): sump fixed, loop imx fixed, and simplifications.
  604: 	(Module): If the status is missing at the last wave but we know
  605: 	that the person is alive, then we can code his/her status as -2
  606: 	(instead of missing=-1 in earlier versions) and his/her
  607: 	contributions to the likelihood is 1 - Prob of dying from last
  608: 	health status (= 1-p13= p11+p12 in the easiest case of somebody in
  609: 	the healthy state at last known wave). Version is 0.98 
  610: 
  611: 2004-05-20  Brouard Nicolas  <brouard@localhost>
  612: 
  613: 	* imach.c (Repository): 
  614: 	Agnes added a direct estimation of mortality (without the need of
  615: 	computing period prevalence and differential mortality). Thus here
  616: 	is version 0.97a which has been distributed to some people at
  617: 	REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
  618: 	mortality using covariates is not done today. Estimating direct
  619: 	mortality is a very different process because it doesn't need
  620: 	interpolation because it is easy to get the lx from the force of
  621: 	the mortality mux in the simplest case as for a Gompertz (log mux
  622: 	= a + b*x . But we have been able to incorporate the new code
  623: 	within former imach program (0.96d) without deteriorating too much
  624: 	the understanding of the program. 
  625: 
  626: 2003-06-25    <brouard@BROUARD>
  627: 
  628: 	* imach.c (Module): On windows (cygwin) function asctime_r doesn't
  629: 	exist so I changed back to asctime which exists.
  630: 	(Module): Version 0.96b
  631: 
  632: 2003-06-24    <brouard@BROUARD>
  633: 
  634: 	* imach.c (Module): Some bugs corrected for windows. Also, when
  635: 	mle=-1 a template is output in file "or"mypar.txt with the design
  636: 	of the covariance matrix to be input.
  637: 
  638: 2003-06-25  Brouard Nicolas  <brouard@homebrou>
  639: 
  640: 	* imach.c (Repository): Duplicated warning errors corrected.
  641: 	(Repository): Elapsed time after each iteration is now output. It
  642: 	helps to forecast when convergence will be reached. Elapsed time
  643: 	is stamped in powell.  We created a new html file for the graphs
  644: 	concerning matrix of covariance. It has extension -cov.htm.
  645: 
  646: 2003-06-23  Brouard Nicolas  <brouard@homebrou>
  647: 
  648: 	* imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.
  649: 
  650: 2003-06-18  Brouard Nicolas  <brouard@homebrou>
  651: 
  652: 	* imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96
  653: 
  654: 2003-06-17  Brouard Nicolas  <brouard@homebrou>
  655: 
  656: 
  657: 	* imach.c (Repository): Check when date of death was earlier that
  658: 	current date of interview. It may happen when the death was just
  659: 	prior to the death. In this case, dh was negative and likelihood
  660: 	was wrong (infinity). We still send an "Error" but patch by
  661: 	assuming that the date of death was just one stepm after the
  662: 	interview.
  663: 	(Repository): Because some people have very long ID (first column)
  664: 	we changed int to long in num[] and we added a new lvector for
  665: 	memory allocation. But we also truncated to 8 characters (left
  666: 	truncation)
  667: 
  668: 	(Repository): No more line truncation errors.
  669: 
  670: 2003-06-14  Brouard Nicolas  <brouard@homebrou>
  671: 
  672: 	* imach.c (Repository): Add of a routine likelione (likelihood
  673: 	only once) which prints on a text file
  674: 	(ilk) the contributions to the likelihood for each
  675: 	individual/wave.
  676: 
  677: 2003-06-13  Brouard Nicolas  <brouard@homebrou>
  678: 	* imach.c (Repository): Replace "freqsummary" at a correct
  679: 	place. It differs from routine "prevalence" which may be called
  680: 	many times. Probs is memory consuming and must be used with
  681: 	parcimony.
  682: 
  683: 2003-06-17    <brouard@BROUARD>
  684: 
  685: 	* timeval.h (Module): Added included file to make use of
  686: 	gettimeofday working on win32 with cygwin.
  687: 
  688: 2003-05-16  Brouard Nicolas  <brouard@brouard>
  689: 	* imach.c (Module): Insert of a warning if the delay between two
  690: 	waves is negative.
  691: 
  692: 	* imach.c (Module): 
  693: 
  694: 2003-05-03    <brouard@BROUARD>
  695: 
  696: 	* imach.c: Some cleaning
  697: 
  698: 2003-03-28    <brouard@BROUARD>
  699: 	* imach.c (Module): In version up to 0.92 likelihood was computed
  700: 	as if date of death was unknown. Death was treated as any other
  701: 	health state: the date of the interview describes the actual state
  702: 	and not the date of a change in health state. The former idea was
  703: 	to consider that at each interview the state was recorded
  704: 	(healthy, disable or death) and IMaCh was corrected; but when we
  705: 	introduced the exact date of death then we should have modified
  706: 	the contribution of an exact death to the likelihood. This new
  707: 	contribution is smaller and very dependent of the step unit
  708: 	stepm. It is no more the probability to die between last interview
  709: 	and month of death but the probability to survive from last
  710: 	interview up to one month before death multiplied by the
  711: 	probability to die within a month. Thanks to Chris
  712: 	Jackson for correcting this bug.  Former versions increased
  713: 	mortality artificially. The bad side is that we add another loop
  714: 
  715: 
  716: 	which slows down the processing. The difference can be up to 10%
  717: 
  718: 
  719: 	lower mortality.
  720: 
  721: 
  722: 
  723: 
  724: 
  725: 2002-05-30    <brouard@BROUARD>
  726: 
  727: 
  728: 
  729: 
  730: 
  731: 	* 
  732: 
  733: 
  734: 
  735: 
  736: 
  737: 	* imach.c (Module): Add correlation matrix of one-step
  738: 
  739: 
  740: 	probabilities and covariance matrix
  741: 
  742: 
  743: 
  744: 
  745: 

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