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version 1.51, 2015/01/03 16:33:27
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version 1.61, 2015/05/05 08:54:59
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Line 1
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Line 1
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| VERSION=0.98p |
VERSION=0.98q2 |
| COPYRIGHT=Copyright (C) 2002-2015 INED-EUROREVES-Institut de longevite-Japan Society for the Promotion of Science (Grant-in-Aid for Scientific Research 25293121) |
COPYRIGHT=Copyright (C) 2002-2015 INED-EUROREVES-Institut de longevite-Japan Society for the Promotion of Science (Grant-in-Aid for Scientific Research 25293121) - Intel Software 2015 |
| #IMACHSETUPVERSION=ilc64 |
IMACHSETUPVERSION=ilc |
| IMACHSETUPVERSION=mvc |
# This is for Windows only |
| |
#IMACHSETUPVERSION=mvc |
| |
|
| # Linux |
# Linux |
| # make _linux=1 imachopt |
# make _linux=1 imachopt |
|
Line 11 IMACHSETUPVERSION=mvc
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Line 12 IMACHSETUPVERSION=mvc
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| # make _linux64onosx=1 imachopt |
# make _linux64onosx=1 imachopt |
| |
|
| # OS/X |
# OS/X |
| |
# make _macosx=1 imachdmg |
| # make _intel64onosx=1 imachopt |
# make _intel64onosx=1 imachopt |
| # make _intel32onosx=1 imachopt |
# make _intel32onosx=1 imachopt |
| # make _intelUNBonosx=1 imachdmg # Not implemented (not useful) |
# make _intelUNBonosx=1 imachdmg # Not implemented (not useful) |
| # make _macosx=1 imach |
# make _macosx=1 imach |
| # make _macosx=1 imachopt |
# make _macosx=1 imachopt |
| # make _macosx=1 imachdmg |
|
| # valgrind --dsymutil=yes --leak-check=full --show-leak-kinds=all --track-origins=yes ~/Documents/imachcvs/imach/src/imach-1.129cvsmac radlc-1.129.imach |
# valgrind --dsymutil=yes --leak-check=full --show-leak-kinds=all --track-origins=yes ~/Documents/imachcvs/imach/src/imach-1.129cvsmac radlc-1.129.imach |
| |
|
| # Windows |
# Windows |
| # make _windowsonosx=1 imachILC64-setup (touch setup.iss.in) #binary should have been compiled on Windows with cl |
# make _windowsonosx=1 imachILC-setup (touch setup.iss.in) #binary should have been compiled on Windows with Intel |
| # make _windowsonosx=1 imachMVC-setup (touch setup.iss.in) #binary should have been compiled on Windows with cl |
# make _windowsonosx=1 imachMVC-setup (touch setup.iss.in) #binary should have been compiled on Windows with cl |
| # make _windowsonosx=1 imachMVC-noreg-setup |
# make _windowsonosx=1 imachMVC-noreg-setup |
| # |
# |
|
Line 42 IMACHSETUPVERSION=mvc
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Line 43 IMACHSETUPVERSION=mvc
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| ##SETUPCOMP= "C:\Program Files\Inno Setup 3\Compil32.exe" |
##SETUPCOMP= "C:\Program Files\Inno Setup 3\Compil32.exe" |
| #TESTFILE=$$HOME/Documents/Recherches/REVES/SAITO/Tokyo2014/adlc-test-mac/adecode-1.142c.imach |
#TESTFILE=$$HOME/Documents/Recherches/REVES/SAITO/Tokyo2014/adlc-test-mac/adecode-1.142c.imach |
| #TESTFILE=$(HOME)/Documents/Recherches/REVES/carol/carol-june2014/educadlmwt24.imach |
#TESTFILE=$(HOME)/Documents/Recherches/REVES/carol/carol-june2014/educadlmwt24.imach |
| TESTFILE=$(HOME)/Documents/Recherches/REVES/Biaspar/biaspar-wopowell.imach |
#TESTFILE=$(HOME)/Documents/Recherches/REVES/Biaspar/biaspar-wopowell.imach |
| |
#TESTFILE=$(HOME)/Documents/Recherches/REVES/Biaspar/rbiaspar-098p.imach |
| |
TESTFILE=$(HOME)/Documents/Recherches/REVES/Aaron/brouard/results/COVARAITE_94/rmypar24pis1cov1-age.imach |
| #TESTFILE=$(HOME)/Documents/Recherches/REVES/SAITO/Tokyo2014/adlc-test-mac/adecode-1.142c.imach |
#TESTFILE=$(HOME)/Documents/Recherches/REVES/SAITO/Tokyo2014/adlc-test-mac/adecode-1.142c.imach |
| #TESTFILE=$(HOME)/Documents/Recherches/REVES/SAITO/Tokyo2014/adlc_test_magei4/radlc_often.imach |
#TESTFILE=$(HOME)/Documents/Recherches/REVES/SAITO/Tokyo2014/adlc_test_magei4/radlc_often.imach |
| #CC= gcc -v |
#CC= gcc -v |
|
Line 52 GCC= gcc
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Line 55 GCC= gcc
|
| ifdef _macosx |
ifdef _macosx |
| # Mac OS/X version |
# Mac OS/X version |
| LFLAGS= -g -lm |
LFLAGS= -g -lm |
| CFLAGS= -g -DDEBUG |
#CFLAGS= -g -DDEBUG |
| |
CFLAGS= -g |
| LFLAGSOPT= -O3 -lm |
LFLAGSOPT= -O3 -lm |
| CFLAGSOPT= -O3 |
CFLAGSOPT= -O3 |
| |
CP= cp |
| |
CROSSCOMPILATION= -DCROSS=0 |
| UNIX2DOS= echo "Unix2dos " |
UNIX2DOS= echo "Unix2dos " |
| DSYMUTIL= dsymutil |
DSYMUTIL= dsymutil |
| STRIP= strip |
STRIP= strip |
|
Line 90 LFLAGS= -g
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Line 96 LFLAGS= -g
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| CFLAGS= -g |
CFLAGS= -g |
| LFLAGSOPT= -O3 -lm |
LFLAGSOPT= -O3 -lm |
| CFLAGSOPT= -O3 |
CFLAGSOPT= -O3 |
| |
CROSSCOMPILATION= -DCROSS=1 |
| CP= cp |
CP= cp |
| UNIX2DOS= unix2dos |
UNIX2DOS= unix2dos |
| SETUPCOMP= wine "C:////Program Files////Inno Setup 4////Compil32.exe" |
SETUPCOMP= wine "C:////Program Files////Inno Setup 4////Compil32.exe" |
|
Line 105 LFLAGS= -g
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Line 112 LFLAGS= -g
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| CFLAGS= -g |
CFLAGS= -g |
| LFLAGSOPT= -O3 -s |
LFLAGSOPT= -O3 -s |
| CFLAGSOPT= -O3 |
CFLAGSOPT= -O3 |
| |
CROSSCOMPILATION= -DCROSS=1 |
| UNIX2DOS= unix2dos |
UNIX2DOS= unix2dos |
| SETUPCOMP= ~/bin/InnoSetup5Playonmac |
SETUPCOMP= ~/bin/InnoSetup5Playonmac |
| CP= cp |
CP= cp |
|
Line 118 LFLAGS= -g
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Line 126 LFLAGS= -g
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| CFLAGS= -g |
CFLAGS= -g |
| LFLAGSOPT= -O3 -lm -s |
LFLAGSOPT= -O3 -lm -s |
| CFLAGSOPT= -O3 |
CFLAGSOPT= -O3 |
| |
CROSSCOMPILATION= -DCROSS=1 |
| UNIX2DOS= unix2dos |
UNIX2DOS= unix2dos |
| SETUPCOMP= ~/bin/InnoSetup5Playonmac |
SETUPCOMP= ~/bin/InnoSetup5Playonmac |
| CP= cp |
CP= cp |
|
Line 134 ifdef _intel64onosx
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Line 143 ifdef _intel64onosx
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| GCC=/opt/intel/bin/icc |
GCC=/opt/intel/bin/icc |
| CFLAGS= -m64 -g -std=c99 |
CFLAGS= -m64 -g -std=c99 |
| LFLAGS= -g -m64 |
LFLAGS= -g -m64 |
| |
#CFLAGSOPT= -O3 -m64 -g -std=c99 -no-prec-div idem |
| |
#CFLAGSOPT= -O3 -m64 -g -std=c99 -xSSSE3_ATOM 402 |
| CFLAGSOPT= -O3 -m64 -g -std=c99 |
CFLAGSOPT= -O3 -m64 -g -std=c99 |
| |
CROSSCOMPILATION= -DCROSS=0 |
| IGNORE :=$(shell bash -c "source /opt/intel/bin/iccvars.sh intel64; env | sed 's/=/:=/' | sed 's/^/export /' > makeenv") |
IGNORE :=$(shell bash -c "source /opt/intel/bin/iccvars.sh intel64; env | sed 's/=/:=/' | sed 's/^/export /' > makeenv") |
| include makeenv |
include makeenv |
| #lipo -create -arch i386 HelloWorld_32 -arch x86_64 HelloWorld_64 -output HelloWorld |
#lipo -create -arch i386 HelloWorld_32 -arch x86_64 HelloWorld_64 -output HelloWorld |
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Line 152 GCC=/opt/intel/bin/icc
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Line 164 GCC=/opt/intel/bin/icc
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| CFLAGS= -m32 -g -std=c99 |
CFLAGS= -m32 -g -std=c99 |
| LFLAGS= -g -m32 |
LFLAGS= -g -m32 |
| CFLAGSOPT= -O3 -m32 -g -std=c99 |
CFLAGSOPT= -O3 -m32 -g -std=c99 |
| |
CROSSCOMPILATION= -DCROSS=0 |
| IGNORE :=$(shell bash -c "source /opt/intel/bin/iccvars.sh ia32; env | sed 's/=/:=/' | sed 's/^/export /' > makeenv") |
IGNORE :=$(shell bash -c "source /opt/intel/bin/iccvars.sh ia32; env | sed 's/=/:=/' | sed 's/^/export /' > makeenv") |
| include makeenv |
include makeenv |
| #lipo -create -arch i386 HelloWorld_32 -arch x86_64 HelloWorld_64 -output HelloWorld |
#lipo -create -arch i386 HelloWorld_32 -arch x86_64 HelloWorld_64 -output HelloWorld |
|
Line 187 LFLAGS= -g
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Line 200 LFLAGS= -g
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| CFLAGS= -g |
CFLAGS= -g |
| LFLAGSOPT= -O3 -s -lm |
LFLAGSOPT= -O3 -s -lm |
| CFLAGSOPT= -O3 |
CFLAGSOPT= -O3 |
| |
CROSSCOMPILATION= -DCROSS=1 |
| TAR= /sw/bin/gnutar |
TAR= /sw/bin/gnutar |
| UNIX2DOS= unix2dos |
UNIX2DOS= unix2dos |
| SETUPCOMP= ~/bin/InnoSetup5Playonmac |
SETUPCOMP= ~/bin/InnoSetup5Playonmac |
|
Line 196 endif
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Line 210 endif
|
| |
|
| ifdef _linux |
ifdef _linux |
| #CFLAGS= -g -DUNIX -DDEBUGHESS |
#CFLAGS= -g -DUNIX -DDEBUGHESS |
| CFLAGS= -g -DDEBUG |
#CFLAGS= -g -DDEBUG -DFIXMNBRAK |
| |
#CFLAGS= -g -DDEBUG |
| |
CFLAGS= -g |
| LFLAGS= -g -lm |
LFLAGS= -g -lm |
| IGSL= -I/usr/include/gsl |
IGSL= -I/usr/include/gsl |
| LGSL= -lgsl -lgslcblas |
LGSL= -lgsl -lgslcblas |
|
Line 204 INLOPT= -I/usr/local/include
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Line 220 INLOPT= -I/usr/local/include
|
| LNLOPT= -lm -L/usr/local/lib -lnlopt |
LNLOPT= -lm -L/usr/local/lib -lnlopt |
| CFLAGSOPT= -O3 -g |
CFLAGSOPT= -O3 -g |
| LFLAGSOPT= -O3 -g -lm |
LFLAGSOPT= -O3 -g -lm |
| |
CROSSCOMPILATION= -DCROSS=0 |
| UNIX2DOS= unix2dos |
UNIX2DOS= unix2dos |
| SETUPCOMP= wine "C:////Program Files////Inno Setup 4////Compil32.exe" |
SETUPCOMP= wine "C:////Program Files////Inno Setup 4////Compil32.exe" |
| BINVERSION=LINUXnative |
BINVERSION=LINUXnative |
|
Line 220 TMPNOREGSETUPSCRIPT=noreg-setup.iss
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Line 237 TMPNOREGSETUPSCRIPT=noreg-setup.iss
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| TMPSCRIPTIN=setup.iss.in |
TMPSCRIPTIN=setup.iss.in |
| APPLICATION=IMaCh |
APPLICATION=IMaCh |
| APPNAME=$(APPLICATION)-$(VERSION) |
APPNAME=$(APPLICATION)-$(VERSION) |
| GNUPLOTVERSION=4.0 |
APPCOMPILATIONMODE=$(IMACHSETUPVERSION) |
| |
GNUPLOTVERSION=4.6 |
| LICENSE=Copying |
LICENSE=Copying |
| TMPSETUPEXE=imach-$(VERSION)-$(IMACHSETUPVERSION)-setup.exe |
TMPSETUPEXE=imach-$(VERSION)-$(IMACHSETUPVERSION)-setup.exe |
| TMPNOREGSETUPEXE=imach-$(VERSION)-$(IMACHSETUPVERSION)-noreg-setup.exe |
TMPNOREGSETUPEXE=imach-$(VERSION)-$(IMACHSETUPVERSION)-noreg-setup.exe |
|
Line 232 setup.iss: setup.iss.in
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Line 250 setup.iss: setup.iss.in
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| s/@NOTINNOREG@//g; \ |
s/@NOTINNOREG@//g; \ |
| s/@NOREG@//g; \ |
s/@NOREG@//g; \ |
| s/@IMACHSETUPVERSION@/$(IMACHSETUPVERSION)/g; \ |
s/@IMACHSETUPVERSION@/$(IMACHSETUPVERSION)/g; \ |
| |
s/@APPCOMPILATIONMODE@/$(APPCOMPILATIONMODE)/g; \ |
| s/@VERSION@/$(VERSION)/g; \ |
s/@VERSION@/$(VERSION)/g; \ |
| s/@GNUPLOTVERSION@/$(GNUPLOTVERSION)/g; \ |
s/@GNUPLOTVERSION@/$(GNUPLOTVERSION)/g; \ |
| s/@INFOBEFOREFILE@/$(INFOBEFOREFILE)/g; \ |
s/@INFOBEFOREFILE@/$(INFOBEFOREFILE)/g; \ |
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Line 261 $(TMPNOREGSETUPSCRIPT): $(TMPSCRIPTIN)
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Line 280 $(TMPNOREGSETUPSCRIPT): $(TMPSCRIPTIN)
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| $(TMPSETUPEXE): $(TMPSETUPSCRIPT) |
$(TMPSETUPEXE): $(TMPSETUPSCRIPT) |
| $(SETUPCOMP) /cc $(TMPSETUPSCRIPT) |
$(SETUPCOMP) /cc $(TMPSETUPSCRIPT) |
| |
|
| $(TMPNOREGSETUPEXE): $(TMPNOREGSETUPSCRIPT) |
#$(TMPNOREGSETUPEXE): $(TMPNOREGSETUPSCRIPT) |
| $(SETUPCOMP) /cc $(TMPNOREGSETUPSCRIPT) |
# $(SETUPCOMP) /cc $(TMPNOREGSETUPSCRIPT) |
| |
|
| PARAM=mypar1 |
PARAM=mypar1 |
| |
|
|
Line 281 imachcyg-noreg-setup: imachcygopt.exe no
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Line 300 imachcyg-noreg-setup: imachcygopt.exe no
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| $(SETUPCOMP) /cc $(TMPNOREGSETUPSCRIPT) |
$(SETUPCOMP) /cc $(TMPNOREGSETUPSCRIPT) |
| cp Output/$(TMPNOREGSETUPEXE) imachcyg-noreg-setup |
cp Output/$(TMPNOREGSETUPEXE) imachcyg-noreg-setup |
| |
|
| imachILC64-setup: IMaCh-ilc64.exe setup.iss |
# both 32 and 64 executables should have been built on Windows with Intel compiler. |
| |
imachILC-setup: IMaCh-ilc64-$(VERSION).exe IMaCh-ilc32-$(VERSION).exe setup.iss |
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pwd |
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$(SETUPCOMP) /cc setup.iss |
| |
$(CP) Output/$(TMPSETUPEXE) imachILC-setup |
| |
|
| |
imachILC64-setup: IMaCh-ilc64-$(VERSION).exe setup.iss |
| pwd |
pwd |
| $(CP) IMaCh-ilc64.exe imach.exe |
$(CP) IMaCh-ilc64-$(VERSION).exe imach.exe |
| $(SETUPCOMP) /cc setup.iss |
$(SETUPCOMP) /cc setup.iss |
| $(CP) Output/$(TMPSETUPEXE) imachILC64-setup |
$(CP) Output/$(TMPSETUPEXE) imachILC64-setup |
| |
|
| imachILC64-noreg-setup: IMaCh-ilc64.exe noreg-setup.iss |
imachILC64-noreg-setup: IMaCh-ilc64-$(VERSION).exe noreg-setup.iss |
| touch setup.iss.in |
touch setup.iss.in |
| $(CP) IMaCh-ilc64.exe imach.exe |
|
| $(SETUPCOMP) /cc $(TMPNOREGSETUPSCRIPT) |
$(SETUPCOMP) /cc $(TMPNOREGSETUPSCRIPT) |
| $(CP) Output/$(TMPSETUPEXE) imachILC64-noreg-setup |
$(CP) Output/$(TMPSETUPEXE) imachILC64-noreg-setup |
| |
|
| imachILC32-setup: IMaCh-ilc32.exe setup.iss |
imachILC32-setup: IMaCh-ilc32-$(VERSION).exe setup.iss |
| touch setup.iss.in |
touch setup.iss.in |
| $(CP) IMaCh-ilc32.exe imach.exe |
$(CP) IMaCh-ilc32-$(VERSION).exe imach.exe |
| $(SETUPCOMP) /cc setup.iss |
$(SETUPCOMP) /cc setup.iss |
| $(CP) Output/$(TMPSETUPEXE) imachILC32-setup |
$(CP) Output/$(TMPSETUPEXE) imachILC32-setup |
| |
|
|
Line 309 imachMVC-setup: imachMVC.exe setup.iss
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Line 333 imachMVC-setup: imachMVC.exe setup.iss
|
| touch setup.iss.in |
touch setup.iss.in |
| $(CP) imachMVC.exe imach.exe |
$(CP) imachMVC.exe imach.exe |
| $(SETUPCOMP) /cc setup.iss |
$(SETUPCOMP) /cc setup.iss |
| $(CP) Output/$(TMPSETUPEXE) imachcyg-setup |
$(CP) Output/$(TMPSETUPEXE) imachMVC-setup |
| |
|
| # imachcyg-noreg-setup : imachcygopt imachcygopt.o setup.iss.in noreg-setup.iss $(TMPNOREGSETUPEXE) |
# imachcyg-noreg-setup : imachcygopt imachcygopt.o setup.iss.in noreg-setup.iss $(TMPNOREGSETUPEXE) |
| imachMVC-noreg-setup: imachMVC.exe noreg-setup.iss |
imachMVC-noreg-setup: imachMVC.exe noreg-setup.iss |
|
Line 323 simach : simach.o
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Line 347 simach : simach.o
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| simach.o : simach.c |
simach.o : simach.c |
| $(CC) $(CFLAGS) -DGSL -c simach.c |
$(CC) $(CFLAGS) -DGSL -c simach.c |
| |
|
| imach : imach.o |
imachtest: imachtest.o |
| |
$(CC) $(LFLAGS) -o imachtest imachtest.o |
| |
ifdef _macosx |
| |
$(DSYMUTIL) imachtest |
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endif |
| |
|
| |
imach: imach.o |
| $(CC) $(LFLAGS) -o imach imach.o |
$(CC) $(LFLAGS) -o imach imach.o |
| ifdef _macosx |
ifdef _macosx |
| $(DSYMUTIL) imach |
$(DSYMUTIL) imach |
| endif |
endif |
| |
|
| imach.o : imach.c |
imach.o : imach.c |
| $(CC) $(CFLAGS) -DPOWELL -c imach.c |
$(CC) $(CFLAGS) $(CROSSCOMPILATION) -c imach.c |
| |
# $(CC) $(CFLAGS) $(CROSSCOMPILATION) -DDEBUGBRENT -c imach.c |
| |
|
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imachtest.o : imach.c |
| |
$(CC) $(CFLAGS) $(CROSSCOMPILATION) -DPOWELLORIGINAL -DNRCORIGINAL -DINFINITYORIGINAL -DDEBUGBRENT -o imachtest.o -c imach.c |
| |
|
| |
# $(CC) $(CFLAGS) $(CROSSCOMPILATION) -DFIXMNBRAK -o imachtest.o -c imach.c |
| |
|
| # http://msdn.microsoft.com/en-us/library/abx4dbyh%28v=vs.100%29.aspx |
# http://msdn.microsoft.com/en-us/library/abx4dbyh%28v=vs.100%29.aspx |
| imachcl: imach.c |
imachcl: imach.c |
|
Line 365 imachBOBYQAopt.o : imach.c
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Line 401 imachBOBYQAopt.o : imach.c
|
| |
|
| imachopt : imachopt.o |
imachopt : imachopt.o |
| $(CC) $(LFLAGSOPT) -o imachopt imachopt.o |
$(CC) $(LFLAGSOPT) -o imachopt imachopt.o |
| ln -f imachopt imach |
# ln -f imachopt imach |
| $(CP) imachopt Output/imachopt$(VERSION)-$(BINVERSION) |
$(CP) imachopt Output/imachopt$(VERSION)-$(BINVERSION) |
| $(CP) -f imach ../bin |
$(CP) -f imach ../bin |
| ifdef _intel64onosx |
ifdef _intel64onosx |
|
Line 421 imachdmg : imachopt.o create-dmg applet
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Line 457 imachdmg : imachopt.o create-dmg applet
|
| # ./create-dmg --volname "IMaCh $(VERSION)" imach$(VERSION).dmg imach$(VERSION).app |
# ./create-dmg --volname "IMaCh $(VERSION)" imach$(VERSION).dmg imach$(VERSION).app |
| # ./createdmg2.sh --volname "IMaCh $(VERSION)" imach$(VERSION).dmg imach$(VERSION) |
# ./createdmg2.sh --volname "IMaCh $(VERSION)" imach$(VERSION).dmg imach$(VERSION) |
| |
|
| upload: |
md5: |
| ls Output/* | xargs md5sum |
ls Output/* | xargs md5sum |
| rsync -v Output/* brouard@henry.ined.fr:/home/euroreves/html/imach/ |
upload: |
| |
rsync -v Output/imach-0.98q2-ilc-setup.exe brouard@henry.ined.fr:/home/euroreves/html/imach/ |
| |
#rsync -v Output/* brouard@henry.ined.fr:/home/euroreves/html/imach/ |
| |
|
| imachcyg : imachcyg.o |
imachcyg : imachcyg.o |
| $(CC) $(LFLAGS) -o imach imachcyg.o |
$(CC) $(LFLAGS) -o imach imachcyg.o |
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