version 1.352, 2023/04/29 10:46:21
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version 1.354, 2023/05/21 05:05:17
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/* $Id$ |
/* $Id$ |
$State$ |
$State$ |
$Log$ |
$Log$ |
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Revision 1.354 2023/05/21 05:05:17 brouard |
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Summary: Temporary change for imachprax |
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Revision 1.353 2023/05/08 18:48:22 brouard |
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*** empty log message *** |
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Revision 1.352 2023/04/29 10:46:21 brouard |
Revision 1.352 2023/04/29 10:46:21 brouard |
*** empty log message *** |
*** empty log message *** |
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Line 1609 int **nbcode, *Tvar; /**< model=V2 => Tv
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Line 1615 int **nbcode, *Tvar; /**< model=V2 => Tv
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/* Tage[cptcovage]=k 5 8 10 */ /* Position in the model of ith cov*age */ |
/* Tage[cptcovage]=k 5 8 10 */ /* Position in the model of ith cov*age */ |
/* model="V2+V3+V4+V6+V7+V6*V2+V7*V2+V6*V3+V7*V3+V6*V4+V7*V4+age*V2+age*V3+age*V4+age*V6+age*V7+age*V6*V2+age*V6*V3+age*V7*V3+age*V6*V4+age*V7*V4\r"*/ |
/* model="V2+V3+V4+V6+V7+V6*V2+V7*V2+V6*V3+V7*V3+V6*V4+V7*V4+age*V2+age*V3+age*V4+age*V6+age*V7+age*V6*V2+age*V6*V3+age*V7*V3+age*V6*V4+age*V7*V4\r"*/ |
/* p Tvard[1][1]@21 = {6, 2, 7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0, 0, 0, 0, 0, 0, 0, 0, 0}*/ |
/* p Tvard[1][1]@21 = {6, 2, 7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0, 0, 0, 0, 0, 0, 0, 0, 0}*/ |
/* p Tvard[2][1]@21 = {7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0 <repeats 11 times>} |
/* p Tvard[2][1]@21 = {7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0 <repeats 11 times>} */ |
/* p Tvardk[1][1]@24 = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 6, 2, 7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0, 0}*/ |
/* p Tvardk[1][1]@24 = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 6, 2, 7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0, 0}*/ |
/* p Tvardk[1][1]@22 = {0, 0, 0, 0, 0, 0, 0, 0, 6, 2, 7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0, 0} */ |
/* p Tvardk[1][1]@22 = {0, 0, 0, 0, 0, 0, 0, 0, 6, 2, 7, 2, 6, 3, 7, 3, 6, 4, 7, 4, 0, 0} */ |
/* Tvard[1][1]@4={4,3,1,2} V4*V3 V1*V2 */ /* Position in model of the ith prod without age */ |
/* Tvard[1][1]@4={4,3,1,2} V4*V3 V1*V2 */ /* Position in model of the ith prod without age */ |
Line 4550 double funcone( double *x)
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Line 4556 double funcone( double *x)
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* 3 ncovta=15 +age*V3*V2+age*V2+agev3+ageV4 +age*V6 + age*V7 + age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 |
* 3 ncovta=15 +age*V3*V2+age*V2+agev3+ageV4 +age*V6 + age*V7 + age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 |
* 3 TvarAVVA[1]@15= itva 3 2 2 3 4 6 7 6 3 7 3 6 4 7 4 |
* 3 TvarAVVA[1]@15= itva 3 2 2 3 4 6 7 6 3 7 3 6 4 7 4 |
* 3 ncovta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 |
* 3 ncovta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 |
* TvarAVVAind[1]@15= V3 is in k=2 1 1 2 3 4 5 4,2 5,2, 4,3 5 3}TvarVVAind[] |
*?TvarAVVAind[1]@15= V3 is in k=2 1 1 2 3 4 5 4,2 5,2, 4,3 5 3}TvarVVAind[] |
* TvarAVVAind[1]@15= V3 is in k=6 6 12 13 14 15 16 18 18 19,19, 20,20 21,21}TvarVVAind[] |
* TvarAVVAind[1]@15= V3 is in k=6 6 12 13 14 15 16 18 18 19,19, 20,20 21,21}TvarVVAind[] |
* 3 ncovvta=10 +age*V6 + age*V7 + age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 |
* 3 ncovvta=10 +age*V6 + age*V7 + age*V6*V3 +age*V7*V3 + age*V6*V4 +age*V7*V4 |
* 3 we want to compute =cotvar[mw[mi][i]][TvarVVA[ncovva]][i] at position TvarVVAind[ncovva] |
* 3 we want to compute =cotvar[mw[mi][i]][TvarVVA[ncovva]][i] at position TvarVVAind[ncovva] |
Line 4565 double funcone( double *x)
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Line 4571 double funcone( double *x)
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* 6, 8, 9, 10, 11} |
* 6, 8, 9, 10, 11} |
* TvarFind[itv] 0 0 0 |
* TvarFind[itv] 0 0 0 |
* FixedV[itv] 1 1 1 0 1 0 1 0 1 0 0 |
* FixedV[itv] 1 1 1 0 1 0 1 0 1 0 0 |
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*? FixedV[itv] 1 1 1 0 1 0 1 0 1 0 1 0 1 0 |
* Tvar[TvarFind[ncovf]]=[1]=2 [2]=3 [4]=4 |
* Tvar[TvarFind[ncovf]]=[1]=2 [2]=3 [4]=4 |
* Tvar[TvarFind[itv]] [0]=? ?ncovv 1 à ncovvt] |
* Tvar[TvarFind[itv]] [0]=? ?ncovv 1 à ncovvt] |
* Not a fixed cotvar[mw][itv][i] 6 7 6 2 7, 2, 6, 3, 7, 3, 6, 4, 7, 4} |
* Not a fixed cotvar[mw][itv][i] 6 7 6 2 7, 2, 6, 3, 7, 3, 6, 4, 7, 4} |
Line 4576 double funcone( double *x)
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Line 4583 double funcone( double *x)
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ipos=TvarVVind[ncovv]; /* TvarVVind={2, 5, 5] gives the position in the model of the ncovv th varying covariate*/ |
ipos=TvarVVind[ncovv]; /* TvarVVind={2, 5, 5] gives the position in the model of the ncovv th varying covariate*/ |
/* if(TvarFind[itv]==0){ /\* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv *\/ */ |
/* if(TvarFind[itv]==0){ /\* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv *\/ */ |
if(FixedV[itv]!=0){ /* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv */ |
if(FixedV[itv]!=0){ /* Not a fixed covariate? Could be a fixed covariate of a product with a higher than ncovcol+nqv, itv */ |
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/* printf("DEBUG ncovv=%d, Varying TvarVV[ncovv]=%d\n",ncovv, TvarVV[ncovv]); */ |
cotvarv=cotvar[mw[mi][i]][TvarVV[ncovv]][i]; /* because cotvar starts now at first ncovcol+nqv+ntv+nqtv (1 to nqtv) */ |
cotvarv=cotvar[mw[mi][i]][TvarVV[ncovv]][i]; /* because cotvar starts now at first ncovcol+nqv+ntv+nqtv (1 to nqtv) */ |
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/* printf("DEBUG Varying cov[ioffset+ipos=%d]=%g \n",ioffset+ipos,cotvarv); */ |
}else{ /* fixed covariate */ |
}else{ /* fixed covariate */ |
/* cotvarv=covar[Tvar[TvarFind[itv]]][i]; /\* Error: TvarFind gives the name, that is the true column of fixed covariates, but Tvar of the model *\/ */ |
/* cotvarv=covar[Tvar[TvarFind[itv]]][i]; /\* Error: TvarFind gives the name, that is the true column of fixed covariates, but Tvar of the model *\/ */ |
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/* printf("DEBUG ncovv=%d, Fixed TvarVV[ncovv]=%d\n",ncovv, TvarVV[ncovv]); */ |
cotvarv=covar[itv][i]; /* Good: In V6*V3, 3 is fixed at position of the data */ |
cotvarv=covar[itv][i]; /* Good: In V6*V3, 3 is fixed at position of the data */ |
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/* printf("DEBUG Fixed cov[ioffset+ipos=%d]=%g \n",ioffset+ipos,cotvarv); */ |
} |
} |
if(ipos!=iposold){ /* Not a product or first of a product */ |
if(ipos!=iposold){ /* Not a product or first of a product */ |
cotvarvold=cotvarv; |
cotvarvold=cotvarv; |
Line 4588 double funcone( double *x)
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Line 4599 double funcone( double *x)
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} |
} |
iposold=ipos; |
iposold=ipos; |
cov[ioffset+ipos]=cotvarv; |
cov[ioffset+ipos]=cotvarv; |
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/* printf("DEBUG Product cov[ioffset+ipos=%d] \n",ioffset+ipos); */ |
/* For products */ |
/* For products */ |
} |
} |
/* for(itv=1; itv <= ntveff; itv++){ /\* Varying dummy covariates single *\/ */ |
/* for(itv=1; itv <= ntveff; itv++){ /\* Varying dummy covariates single *\/ */ |
Line 4930 void mlikeli(FILE *ficres,double p[], in
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Line 4942 void mlikeli(FILE *ficres,double p[], in
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double fret; |
double fret; |
double fretone; /* Only one call to likelihood */ |
double fretone; /* Only one call to likelihood */ |
/* char filerespow[FILENAMELENGTH];*/ |
/* char filerespow[FILENAMELENGTH];*/ |
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double * p1; /* Shifted parameters from 0 instead of 1 */ |
#ifdef NLOPT |
#ifdef NLOPT |
int creturn; |
int creturn; |
nlopt_opt opt; |
nlopt_opt opt; |
/* double lb[9] = { -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL }; /\* lower bounds *\/ */ |
/* double lb[9] = { -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL, -HUGE_VAL }; /\* lower bounds *\/ */ |
double *lb; |
double *lb; |
double minf; /* the minimum objective value, upon return */ |
double minf; /* the minimum objective value, upon return */ |
double * p1; /* Shifted parameters from 0 instead of 1 */ |
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myfunc_data dinst, *d = &dinst; |
myfunc_data dinst, *d = &dinst; |
#endif |
#endif |
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Line 5272 double hessij( double x[], double **hess
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Line 5285 double hessij( double x[], double **hess
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kmax=kmax+10; |
kmax=kmax+10; |
} |
} |
if(kmax >=10 || firstime ==1){ |
if(kmax >=10 || firstime ==1){ |
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/* What are the thetai and thetaj? thetai/ncovmodel thetai=(thetai-thetai%ncovmodel)/ncovmodel +thetai%ncovmodel=(line,pos) */ |
printf("Warning: directions %d-%d, you are not estimating the Hessian at the exact maximum likelihood; you could increase ftol=%.2e\n",thetai,thetaj, ftol); |
printf("Warning: directions %d-%d, you are not estimating the Hessian at the exact maximum likelihood; you could increase ftol=%.2e\n",thetai,thetaj, ftol); |
fprintf(ficlog,"Warning: directions %d-%d, you are not estimating the Hessian at the exact maximum likelihood; you could increase ftol=%.2e\n",thetai,thetaj, ftol); |
fprintf(ficlog,"Warning: directions %d-%d, you are not estimating the Hessian at the exact maximum likelihood; you could increase ftol=%.2e\n",thetai,thetaj, ftol); |
printf("%d %d k=%d, k1=%.12e k2=%.12e k3=%.12e k4=%.12e delti*k=%.12e deltj*k=%.12e, xi-de*k=%.12e xj-de*k=%.12e res=%.12e k1234=%.12e,k1-2=%.12e,k3-4=%.12e\n",thetai,thetaj,k,k1,k2,k3,k4,delti[thetai]/k,delti[thetaj]/k,x[thetai]-delti[thetai]/k,x[thetaj]-delti[thetaj]/k, res,k1-k2-k3+k4,k1-k2,k3-k4); |
printf("%d %d k=%d, k1=%.12e k2=%.12e k3=%.12e k4=%.12e delti*k=%.12e deltj*k=%.12e, xi-de*k=%.12e xj-de*k=%.12e res=%.12e k1234=%.12e,k1-2=%.12e,k3-4=%.12e\n",thetai,thetaj,k,k1,k2,k3,k4,delti[thetai]/k,delti[thetaj]/k,x[thetai]-delti[thetai]/k,x[thetaj]-delti[thetaj]/k, res,k1-k2-k3+k4,k1-k2,k3-k4); |
Line 8357 true period expectancies (those weighted
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Line 8371 true period expectancies (those weighted
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/******************* Gnuplot file **************/ |
/******************* Gnuplot file **************/ |
void printinggnuplot(char fileresu[], char optionfilefiname[], double ageminpar, double agemaxpar, double bage, double fage , int prevfcast, int prevbcast, char pathc[], double p[], int offyear, int offbyear){ |
void printinggnuplot(char fileresu[], char optionfilefiname[], double ageminpar, double agemaxpar, double bage, double fage , int prevfcast, int prevbcast, char pathc[], double p[], int offyear, int offbyear){ |
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char dirfileres[132],optfileres[132]; |
char dirfileres[256],optfileres[256]; |
char gplotcondition[132], gplotlabel[132]; |
char gplotcondition[256], gplotlabel[256]; |
int cpt=0,k1=0,i=0,k=0,j=0,jk=0,k2=0,k3=0,k4=0,kf=0,kvar=0,kk=0,ipos=0,iposold=0,ij=0, ijp=0, l=0; |
int cpt=0,k1=0,i=0,k=0,j=0,jk=0,k2=0,k3=0,k4=0,kf=0,kvar=0,kk=0,ipos=0,iposold=0,ij=0, ijp=0, l=0; |
int lv=0, vlv=0, kl=0; |
int lv=0, vlv=0, kl=0; |
int ng=0; |
int ng=0; |
Line 11122 int decoderesult( char resultline[], int
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Line 11136 int decoderesult( char resultline[], int
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if (strlen(resultsav) >1){ |
if (strlen(resultsav) >1){ |
j=nbocc(resultsav,'='); /**< j=Number of covariate values'=' in this resultline */ |
j=nbocc(resultsav,'='); /**< j=Number of covariate values'=' in this resultline */ |
} |
} |
if(j == 0){ /* Resultline but no = */ |
if(j == 0 && cptcovs== 0){ /* Resultline but no = and no covariate in the model */ |
TKresult[nres]=0; /* Combination for the nresult and the model */ |
TKresult[nres]=0; /* Combination for the nresult and the model */ |
return (0); |
return (0); |
} |
} |
if( j != cptcovs ){ /* Be careful if a variable is in a product but not single */ |
if( j != cptcovs ){ /* Be careful if a variable is in a product but not single */ |
printf("ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, %s.\n",j, cptcovs, model); |
fprintf(ficlog,"ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, 1+age+%s.\n",j, cptcovs, model);fflush(ficlog); |
fprintf(ficlog,"ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, %s.\n",j, cptcovs, model); |
printf("ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, 1+age+%s.\n",j, cptcovs, model);fflush(stdout); |
/* return 1;*/ |
if(j==0) |
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return 1; |
} |
} |
for(k=1; k<=j;k++){ /* Loop on any covariate of the RESULT LINE */ |
for(k=1; k<=j;k++){ /* Loop on any covariate of the RESULT LINE */ |
if(nbocc(resultsav,'=') >1){ |
if(nbocc(resultsav,'=') >1){ |