version 1.258, 2017/04/03 10:17:47
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version 1.259, 2017/04/04 13:01:16
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/* $Id$ |
/* $Id$ |
$State$ |
$State$ |
$Log$ |
$Log$ |
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Revision 1.259 2017/04/04 13:01:16 brouard |
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Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3 |
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Revision 1.258 2017/04/03 10:17:47 brouard |
Revision 1.258 2017/04/03 10:17:47 brouard |
Summary: Version 0.99r12 |
Summary: Version 0.99r12 |
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Line 6455 void printinghtml(char fileresu[], char
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Line 6458 void printinghtml(char fileresu[], char
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} |
} |
} |
} |
/* aij, bij */ |
/* aij, bij */ |
fprintf(fichtm,"<br>- Logit model (yours is: 1+age+%s), for example: logit(pij)=log(pij/pii)= aij+ bij age + V1 age + etc. as a function of age: <a href=\"%s_%d-1-%d.svg\">%s_%d-1-%d.svg</a><br> \ |
fprintf(fichtm,"<br>- Logit model (yours is: logit(pij)=log(pij/pii)= aij+ bij age+%s) as a function of age: <a href=\"%s_%d-1-%d.svg\">%s_%d-1-%d.svg</a><br> \ |
<img src=\"%s_%d-1-%d.svg\">",model,subdirf2(optionfilefiname,"PE_"),k1,nres,subdirf2(optionfilefiname,"PE_"),k1,nres,subdirf2(optionfilefiname,"PE_"),k1,nres); |
<img src=\"%s_%d-1-%d.svg\">",model,subdirf2(optionfilefiname,"PE_"),k1,nres,subdirf2(optionfilefiname,"PE_"),k1,nres,subdirf2(optionfilefiname,"PE_"),k1,nres); |
/* Pij */ |
/* Pij */ |
fprintf(fichtm,"<br>\n- P<sub>ij</sub> or conditional probabilities to be observed in state j being in state i, %d (stepm) months before: <a href=\"%s_%d-2-%d.svg\">%s_%d-2-%d.svg</a><br> \ |
fprintf(fichtm,"<br>\n- P<sub>ij</sub> or conditional probabilities to be observed in state j being in state i, %d (stepm) months before: <a href=\"%s_%d-2-%d.svg\">%s_%d-2-%d.svg</a><br> \ |
Line 9105 int calandcheckages(int imx, int maxwav,
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Line 9108 int calandcheckages(int imx, int maxwav,
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s[m][i]=-1; |
s[m][i]=-1; |
} |
} |
if((int)moisdc[i]==99 && (int)andc[i]==9999 && s[m][i]>nlstate){ |
if((int)moisdc[i]==99 && (int)andc[i]==9999 && s[m][i]>nlstate){ |
*nberr = *nberr + 1; |
*nbwarn = *nbwarn + 1; |
if(firstone == 0){ |
if(firstone == 0){ |
firstone=1; |
firstone=1; |
printf("Error! Date of death (month %2d and year %4d) of individual %ld on line %d was unknown, you must set an arbitrary year of death or he/she is skipped and results can be biased (%d) because status is a death state %d at wave %d. Wave dropped.\nOther similar cases in log file\n",(int)moisdc[i],(int)andc[i],num[i],i, *nberr,s[m][i],m); |
printf("Warning (#%d)! Date of death (month %2d and year %4d) of individual %ld on line %d was unknown but status is a death state %d at wave %d. If you don't know the vital status, please enter -2. If he/she is still alive but don't know the state, please code with '-1 or '.'. Here, we believe in a death.\nOther similar cases in log file\n", *nbwarn,(int)moisdc[i],(int)andc[i],num[i],i,s[m][i],m); |
} |
} |
fprintf(ficlog,"Error! Date of death (month %2d and year %4d) of individual %ld on line %d was unknown, you must set an arbitrary year of death or he/she is skipped and results can be biased (%d) because status is a death state %d at wave %d. Wave dropped.\n",(int)moisdc[i],(int)andc[i],num[i],i, *nberr,s[m][i],m); |
fprintf(ficlog,"Warning (#%d)! Date of death (month %2d and year %4d) of individual %ld on line %d was unknown but status is a death state %d at wave %d. If you don't know the vital status, please enter -2. If he/she is still alive but don't know the state, please code with '-1 or '.'. Here, we believe in a death.\nOther similar cases in log file\n", *nbwarn,(int)moisdc[i],(int)andc[i],num[i],i,s[m][i],m); |
s[m][i]=-1; |
/* s[m][i]=-1; */ /* Keeping the death status */ |
} |
} |
if((int)moisdc[i]==99 && (int)andc[i]!=9999 && s[m][i]>nlstate){ |
if((int)moisdc[i]==99 && (int)andc[i]!=9999 && s[m][i]>nlstate){ |
(*nberr)++; |
(*nberr)++; |
printf("Error! Month of death of individual %ld on line %d was unknown %2d, you should set it otherwise the information on the death is skipped and results are biased.\n",num[i],i,(int)moisdc[i]); |
printf("Error (#%d)! Month of death of individual %ld on line %d was unknown (%2d) (year of death is %4d) and status is a death state %d at wave %d. Please impute an arbitrary (or not) month and rerun. Currently this transition to death will be skipped (status is set to -2).\nOther similar cases in log file\n", *nberr, num[i],i,(int)moisdc[i],(int)andc[i],s[m][i],m); |
fprintf(ficlog,"Error! Month of death of individual %ld on line %d was unknown %f, you should set it otherwise the information on the death is skipped and results are biased.\n",num[i],i,moisdc[i]); |
fprintf(ficlog,"Error (#%d)! Month of death of individual %ld on line %d was unknown (%2d) (year of death is %4d) and status is a death state %d at wave %d. Please impute an arbitrary (or not) month and rerun. Currently this transition to death will be skipped (status is set to -2).\nOther similar cases in log file\n", *nberr, num[i],i,(int)moisdc[i],(int)andc[i],s[m][i],m); |
s[m][i]=-1; /* We prefer to skip it (and to skip it in version 0.8a1 too */ |
s[m][i]=-2; /* We prefer to skip it (and to skip it in version 0.8a1 too */ |
} |
} |
} |
} |
} |
} |
Line 11268 Please run with mle=-1 to get a correct
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Line 11271 Please run with mle=-1 to get a correct
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fprintf(ficlog,"result: %s\n",resultline); |
fprintf(ficlog,"result: %s\n",resultline); |
break; |
break; |
case 14: |
case 14: |
if(ncovmodel >2){ |
if(ncovmodel >2 && nresult==0 ){ |
printf("ERROR: no result line! It should be at minimum 'result: V2=0 V1=1 or result:.' %s\n",line); |
printf("ERROR: no result lines! It should be at minimum 'result: V2=0 V1=1 or result:.' %s\n",line); |
goto end; |
goto end; |
} |
} |
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break; |
default: |
default: |
nresult=1; |
nresult=1; |
decoderesult(".",nresult ); /* No covariate */ |
decoderesult(".",nresult ); /* No covariate */ |