[BACK]Return to imach.c CVS log [TXT] [DIR] Up to [Local Repository] / imach / src

Diff for /imach/src/imach.c between versions 1.17 and 1.22

version 1.17, 2002/02/20 17:15:02 version 1.22, 2002/02/22 17:54:20
Line 1 Line 1
      /* $Id$
 /*********************** Imach **************************************             Interpolate Markov Chain
   This program computes Healthy Life Expectancies from cross-longitudinal  
   data. Cross-longitudinal consist in a first survey ("cross") where    Short summary of the programme:
   individuals from different ages are interviewed on their health status   
   or degree of  disability. At least a second wave of interviews    This program computes Healthy Life Expectancies from
   ("longitudinal") should  measure each new individual health status.    cross-longitudinal data. Cross-longitudinal data consist in: -1- a
   Health expectancies are computed from the transistions observed between    first survey ("cross") where individuals from different ages are
   waves and are computed for each degree of severity of disability (number    interviewed on their health status or degree of disability (in the
   of life states). More degrees you consider, more time is necessary to    case of a health survey which is our main interest) -2- at least a
   reach the Maximum Likelihood of the parameters involved in the model.    second wave of interviews ("longitudinal") which measure each change
   The simplest model is the multinomial logistic model where pij is    (if any) in individual health status.  Health expectancies are
   the probabibility to be observed in state j at the second wave conditional    computed from the time spent in each health state according to a
   to be observed in state i at the first wave. Therefore the model is:    model. More health states you consider, more time is necessary to reach the
   log(pij/pii)= aij + bij*age+ cij*sex + etc , where 'age' is age and 'sex'    Maximum Likelihood of the parameters involved in the model.  The
   is a covariate. If you want to have a more complex model than "constant and    simplest model is the multinomial logistic model where pij is the
   age", you should modify the program where the markup    probabibility to be observed in state j at the second wave
     *Covariates have to be included here again* invites you to do it.    conditional to be observed in state i at the first wave. Therefore
   More covariates you add, less is the speed of the convergence.    the model is: log(pij/pii)= aij + bij*age+ cij*sex + etc , where
     'age' is age and 'sex' is a covariate. If you want to have a more
   The advantage that this computer programme claims, comes from that if the    complex model than "constant and age", you should modify the program
   delay between waves is not identical for each individual, or if some    where the markup *Covariates have to be included here again* invites
   individual missed an interview, the information is not rounded or lost, but    you to do it.  More covariates you add, slower the
   taken into account using an interpolation or extrapolation.    convergence.
   hPijx is the probability to be  
   observed in state i at age x+h conditional to the observed state i at age    The advantage of this computer programme, compared to a simple
   x. The delay 'h' can be split into an exact number (nh*stepm) of    multinomial logistic model, is clear when the delay between waves is not
   unobserved intermediate  states. This elementary transition (by month or    identical for each individual. Also, if a individual missed an
   quarter trimester, semester or year) is model as a multinomial logistic.    intermediate interview, the information is lost, but taken into
   The hPx matrix is simply the matrix product of nh*stepm elementary matrices    account using an interpolation or extrapolation.  
   and the contribution of each individual to the likelihood is simply hPijx.  
     hPijx is the probability to be observed in state i at age x+h
     conditional to the observed state i at age x. The delay 'h' can be
     split into an exact number (nh*stepm) of unobserved intermediate
     states. This elementary transition (by month or quarter trimester,
     semester or year) is model as a multinomial logistic.  The hPx
     matrix is simply the matrix product of nh*stepm elementary matrices
     and the contribution of each individual to the likelihood is simply
     hPijx.
   
   Also this programme outputs the covariance matrix of the parameters but also    Also this programme outputs the covariance matrix of the parameters but also
   of the life expectancies. It also computes the prevalence limits.    of the life expectancies. It also computes the prevalence limits.
Line 48 Line 56
 #include <unistd.h>  #include <unistd.h>
   
 #define MAXLINE 256  #define MAXLINE 256
   #define GNUPLOTPROGRAM "..\\gp37mgw\\wgnuplot"
 #define FILENAMELENGTH 80  #define FILENAMELENGTH 80
 /*#define DEBUG*/  /*#define DEBUG*/
 #define windows  #define windows
Line 67 Line 76
 #define AGEBASE 40  #define AGEBASE 40
   
   
   int erreur; /* Error number */
 int nvar;  int nvar;
 int cptcovn, cptcovage=0, cptcoveff=0,cptcov;  int cptcovn, cptcovage=0, cptcoveff=0,cptcov;
 int npar=NPARMAX;  int npar=NPARMAX;
Line 129  int m,nb; Line 139  int m,nb;
 int *num, firstpass=0, lastpass=4,*cod, *ncodemax, *Tage;  int *num, firstpass=0, lastpass=4,*cod, *ncodemax, *Tage;
 double **agev,*moisnais, *annais, *moisdc, *andc,**mint, **anint;  double **agev,*moisnais, *annais, *moisdc, *andc,**mint, **anint;
 double **pmmij, ***probs, ***mobaverage;  double **pmmij, ***probs, ***mobaverage;
   double dateintmean=0;
   
 double *weight;  double *weight;
 int **s; /* Status */  int **s; /* Status */
Line 139  double ftol=FTOL; /* Tolerance for compu Line 150  double ftol=FTOL; /* Tolerance for compu
 double ftolhess; /* Tolerance for computing hessian */  double ftolhess; /* Tolerance for computing hessian */
   
 /**************** split *************************/  /**************** split *************************/
 static  int split( char *path, char *dirc, char *name )  static  int split( char *path, char *dirc, char *name, char *ext, char *finame )
 {  {
    char *s;                             /* pointer */     char *s;                             /* pointer */
    int  l1, l2;                         /* length counters */     int  l1, l2;                         /* length counters */
   
    l1 = strlen( path );                 /* length of path */     l1 = strlen( path );                 /* length of path */
    if ( l1 == 0 ) return( GLOCK_ERROR_NOPATH );     if ( l1 == 0 ) return( GLOCK_ERROR_NOPATH );
   #ifdef windows
    s = strrchr( path, '\\' );           /* find last / */     s = strrchr( path, '\\' );           /* find last / */
   #else
      s = strrchr( path, '/' );            /* find last / */
   #endif
    if ( s == NULL ) {                   /* no directory, so use current */     if ( s == NULL ) {                   /* no directory, so use current */
 #if     defined(__bsd__)                /* get current working directory */  #if     defined(__bsd__)                /* get current working directory */
       extern char       *getwd( );        extern char       *getwd( );
Line 169  static int split( char *path, char *dirc Line 184  static int split( char *path, char *dirc
       dirc[l1-l2] = 0;                  /* add zero */        dirc[l1-l2] = 0;                  /* add zero */
    }     }
    l1 = strlen( dirc );                 /* length of directory */     l1 = strlen( dirc );                 /* length of directory */
   #ifdef windows
    if ( dirc[l1-1] != '\\' ) { dirc[l1] = '\\'; dirc[l1+1] = 0; }     if ( dirc[l1-1] != '\\' ) { dirc[l1] = '\\'; dirc[l1+1] = 0; }
   #else
      if ( dirc[l1-1] != '/' ) { dirc[l1] = '/'; dirc[l1+1] = 0; }
   #endif
      s = strrchr( name, '.' );            /* find last / */
      s++;
      strcpy(ext,s);                       /* save extension */
      l1= strlen( name);
      l2= strlen( s)+1;
      strncpy( finame, name, l1-l2);
      finame[l1-l2]= 0;
    return( 0 );                         /* we're done */     return( 0 );                         /* we're done */
 }  }
   
Line 717  double **pmij(double **ps, double *cov, Line 743  double **pmij(double **ps, double *cov,
         s2 += x[(i-1)*nlstate*ncovmodel+(j-2)*ncovmodel+nc+(i-1)*(ndeath-1)*ncovmodel]*cov[nc];          s2 += x[(i-1)*nlstate*ncovmodel+(j-2)*ncovmodel+nc+(i-1)*(ndeath-1)*ncovmodel]*cov[nc];
         /*printf("Int j>i s1=%.17e, s2=%.17e %lx %lx\n",s1,s2,s1,s2);*/          /*printf("Int j>i s1=%.17e, s2=%.17e %lx %lx\n",s1,s2,s1,s2);*/
       }        }
       ps[i][j]=(s2);        ps[i][j]=s2;
     }      }
   }    }
     /*ps[3][2]=1;*/      /*ps[3][2]=1;*/
Line 900  void mlikeli(FILE *ficres,double p[], in Line 926  void mlikeli(FILE *ficres,double p[], in
   powell(p,xi,npar,ftol,&iter,&fret,func);    powell(p,xi,npar,ftol,&iter,&fret,func);
   
    printf("\n#Number of iterations = %d, -2 Log likelihood = %.12f\n",iter,func(p));     printf("\n#Number of iterations = %d, -2 Log likelihood = %.12f\n",iter,func(p));
   fprintf(ficres,"#Number of iterations = %d, -2 Log likelihood = %.12f ",iter,func(p));    fprintf(ficres,"#Number of iterations = %d, -2 Log likelihood = %.12f \n",iter,func(p));
   
 }  }
   
Line 1150  void lubksb(double **a, int n, int *indx Line 1176  void lubksb(double **a, int n, int *indx
 }  }
   
 /************ Frequencies ********************/  /************ Frequencies ********************/
 void  freqsummary(char fileres[], int agemin, int agemax, int **s, double **agev, int nlstate, int imx, int *Tvar, int **nbcode, int *ncodemax, int fprev1,int lprev1,double **mint,double **anint)  void  freqsummary(char fileres[], int agemin, int agemax, int **s, double **agev, int nlstate, int imx, int *Tvar, int **nbcode, int *ncodemax,double **mint,double **anint, double dateprev1,double dateprev2)
 {  /* Some frequencies */  {  /* Some frequencies */
     
   int i, m, jk, k1, k2,i1, j1, bool, z1,z2,j;    int i, m, jk, k1,i1, j1, bool, z1,z2,j;
   double ***freq; /* Frequencies */    double ***freq; /* Frequencies */
   double *pp;    double *pp;
   double pos;    double pos, k2, dateintsum=0,k2cpt=0;
   FILE *ficresp;    FILE *ficresp;
   char fileresp[FILENAMELENGTH];    char fileresp[FILENAMELENGTH];
   
   pp=vector(1,nlstate);    pp=vector(1,nlstate);
   probs= ma3x(1,130 ,1,8, 1,8);    probs= ma3x(1,AGESUP,1,NCOVMAX, 1,NCOVMAX);
   strcpy(fileresp,"p");    strcpy(fileresp,"p");
   strcat(fileresp,fileres);    strcat(fileresp,fileres);
   if((ficresp=fopen(fileresp,"w"))==NULL) {    if((ficresp=fopen(fileresp,"w"))==NULL) {
Line 1183  void  freqsummary(char fileres[], int ag Line 1209  void  freqsummary(char fileres[], int ag
          for (jk=-1; jk<=nlstate+ndeath; jk++)             for (jk=-1; jk<=nlstate+ndeath; jk++)  
            for(m=agemin; m <= agemax+3; m++)             for(m=agemin; m <= agemax+3; m++)
              freq[i][jk][m]=0;               freq[i][jk][m]=0;
          
           dateintsum=0;
           k2cpt=0;
        for (i=1; i<=imx; i++) {         for (i=1; i<=imx; i++) {
          bool=1;           bool=1;
          if  (cptcovn>0) {           if  (cptcovn>0) {
Line 1191  void  freqsummary(char fileres[], int ag Line 1219  void  freqsummary(char fileres[], int ag
              if (covar[Tvaraff[z1]][i]!= nbcode[Tvaraff[z1]][codtab[j1][z1]])               if (covar[Tvaraff[z1]][i]!= nbcode[Tvaraff[z1]][codtab[j1][z1]])
                bool=0;                 bool=0;
          }           }
           if (bool==1) {           if (bool==1) {
             for(m=fprev1; m<=lprev1; m++){             for(m=firstpass; m<=lastpass; m++){
              k2=anint[m][i]+(mint[m][i]/12.);               k2=anint[m][i]+(mint[m][i]/12.);
              if ((k2>=1984) && (k2<=1988.5)) {               if ((k2>=dateprev1) && (k2<=dateprev2)) {
              if(agev[m][i]==0) agev[m][i]=agemax+1;                 if(agev[m][i]==0) agev[m][i]=agemax+1;
              if(agev[m][i]==1) agev[m][i]=agemax+2;                 if(agev[m][i]==1) agev[m][i]=agemax+2;
              freq[s[m][i]][s[m+1][i]][(int)agev[m][i]] += weight[i];                 freq[s[m][i]][s[m+1][i]][(int)agev[m][i]] += weight[i];
              freq[s[m][i]][s[m+1][i]][(int) agemax+3] += weight[i];                 freq[s[m][i]][s[m+1][i]][(int) agemax+3] += weight[i];
                  if ((agev[m][i]>1) && (agev[m][i]< (agemax+3))) {
                    dateintsum=dateintsum+k2;
                    k2cpt++;
                  }
   
              }               }
             }             }
           }           }
        }         }
         if  (cptcovn>0) {          if  (cptcovn>0) {
          fprintf(ficresp, "\n#********** Variable ");           fprintf(ficresp, "\n#********** Variable ");
Line 1261  void  freqsummary(char fileres[], int ag Line 1294  void  freqsummary(char fileres[], int ag
     }      }
     }      }
  }   }
     dateintmean=dateintsum/k2cpt;
     
   fclose(ficresp);    fclose(ficresp);
   free_ma3x(freq,-1,nlstate+ndeath,-1,nlstate+ndeath,(int) agemin,(int) agemax+3);    free_ma3x(freq,-1,nlstate+ndeath,-1,nlstate+ndeath,(int) agemin,(int) agemax+3);
   free_vector(pp,1,nlstate);    free_vector(pp,1,nlstate);
   
 }  /* End of Freq */    /* End of Freq */
   }
   
 /************ Prevalence ********************/  /************ Prevalence ********************/
 void prevalence(int agemin, int agemax, int **s, double **agev, int nlstate, int imx, int *Tvar, int **nbcode, int *ncodemax, int fprev1,int lprev1)  void prevalence(int agemin, int agemax, int **s, double **agev, int nlstate, int imx, int *Tvar, int **nbcode, int *ncodemax,double **mint,double **anint, double dateprev1,double dateprev2, double calagedate)
 {  /* Some frequencies */  {  /* Some frequencies */
     
   int i, m, jk, k1, i1, j1, bool, z1,z2,j;    int i, m, jk, k1, i1, j1, bool, z1,z2,j;
   double ***freq; /* Frequencies */    double ***freq; /* Frequencies */
   double *pp;    double *pp;
   double pos;    double pos, k2;
   
   pp=vector(1,nlstate);    pp=vector(1,nlstate);
   probs= ma3x(1,130 ,1,8, 1,8);    probs= ma3x(1,AGESUP,1,NCOVMAX, 1,NCOVMAX);
     
   freq=ma3x(-1,nlstate+ndeath,-1,nlstate+ndeath,agemin,agemax+3);    freq=ma3x(-1,nlstate+ndeath,-1,nlstate+ndeath,agemin,agemax+3);
   j1=0;    j1=0;
Line 1293  void prevalence(int agemin, int agemax, Line 1328  void prevalence(int agemin, int agemax,
       for (i=-1; i<=nlstate+ndeath; i++)          for (i=-1; i<=nlstate+ndeath; i++)  
         for (jk=-1; jk<=nlstate+ndeath; jk++)            for (jk=-1; jk<=nlstate+ndeath; jk++)  
           for(m=agemin; m <= agemax+3; m++)            for(m=agemin; m <= agemax+3; m++)
           freq[i][jk][m]=0;              freq[i][jk][m]=0;
             
       for (i=1; i<=imx; i++) {        for (i=1; i<=imx; i++) {
         bool=1;          bool=1;
Line 1301  void prevalence(int agemin, int agemax, Line 1336  void prevalence(int agemin, int agemax,
           for (z1=1; z1<=cptcoveff; z1++)            for (z1=1; z1<=cptcoveff; z1++)
             if (covar[Tvaraff[z1]][i]!= nbcode[Tvaraff[z1]][codtab[j1][z1]])              if (covar[Tvaraff[z1]][i]!= nbcode[Tvaraff[z1]][codtab[j1][z1]])
               bool=0;                bool=0;
               }          }
         if (bool==1) {          if (bool==1) {
           for(m=fprev1; m<=lprev1; m++){            for(m=firstpass; m<=lastpass; m++){
             if(agev[m][i]==0) agev[m][i]=agemax+1;              k2=anint[m][i]+(mint[m][i]/12.);
             if(agev[m][i]==1) agev[m][i]=agemax+2;              if ((k2>=dateprev1) && (k2<=dateprev2)) {
             freq[s[m][i]][s[m+1][i]][(int)agev[m][i]] += weight[i];                if(agev[m][i]==0) agev[m][i]=agemax+1;
             freq[s[m][i]][s[m+1][i]][(int) agemax+3] += weight[i];                if(agev[m][i]==1) agev[m][i]=agemax+2;
                 freq[s[m][i]][s[m+1][i]][(int)(agev[m][i]+1-((int)calagedate %12)/12.)] += weight[i];
                 freq[s[m][i]][s[m+1][i]][(int)(agemax+3+1)] += weight[i];  
               }
           }            }
         }          }
       }        }
        for(i=(int)agemin; i <= (int)agemax+3; i++){       
         for(jk=1; jk <=nlstate ; jk++){          for(i=(int)agemin; i <= (int)agemax+3; i++){
           for(m=-1, pp[jk]=0; m <=nlstate+ndeath ; m++)            for(jk=1; jk <=nlstate ; jk++){
             pp[jk] += freq[jk][m][i];              for(m=-1, pp[jk]=0; m <=nlstate+ndeath ; m++)
         }                pp[jk] += freq[jk][m][i];
         for(jk=1; jk <=nlstate ; jk++){            }
           for(m=-1, pos=0; m <=0 ; m++)            for(jk=1; jk <=nlstate ; jk++){
               for(m=-1, pos=0; m <=0 ; m++)
             pos += freq[jk][m][i];              pos += freq[jk][m][i];
         }          }
                 
Line 1336  void prevalence(int agemin, int agemax, Line 1375  void prevalence(int agemin, int agemax,
            }             }
          }           }
                     
          }          }
     }      }
   }    }
     
Line 1345  void prevalence(int agemin, int agemax, Line 1384  void prevalence(int agemin, int agemax,
   free_vector(pp,1,nlstate);    free_vector(pp,1,nlstate);
     
 }  /* End of Freq */  }  /* End of Freq */
   
 /************* Waves Concatenation ***************/  /************* Waves Concatenation ***************/
   
 void  concatwav(int wav[], int **dh, int **mw, int **s, double *agedc, double **agev, int  firstpass, int lastpass, int imx, int nlstate, int stepm)  void  concatwav(int wav[], int **dh, int **mw, int **s, double *agedc, double **agev, int  firstpass, int lastpass, int imx, int nlstate, int stepm)
Line 1843  fclose(ficresprob); Line 1883  fclose(ficresprob);
 /**************** Main Program *****************/  /**************** Main Program *****************/
 /***********************************************/  /***********************************************/
   
 /*int main(int argc, char *argv[])*/  int main(int argc, char *argv[])
 int main()  
 {  {
   
   int i,j, k, n=MAXN,iter,m,size,cptcode, cptcod;    int i,j, k, n=MAXN,iter,m,size,cptcode, cptcod;
Line 1860  int main() Line 1899  int main()
   char line[MAXLINE], linepar[MAXLINE];    char line[MAXLINE], linepar[MAXLINE];
   char title[MAXLINE];    char title[MAXLINE];
   char optionfile[FILENAMELENGTH], datafile[FILENAMELENGTH],  filerespl[FILENAMELENGTH], optionfilehtm[FILENAMELENGTH];    char optionfile[FILENAMELENGTH], datafile[FILENAMELENGTH],  filerespl[FILENAMELENGTH], optionfilehtm[FILENAMELENGTH];
   char fileres[FILENAMELENGTH], filerespij[FILENAMELENGTH], filereso[FILENAMELENGTH], fileresf[FILENAMELENGTH];    char optionfilext[10], optionfilefiname[FILENAMELENGTH], optionfilegnuplot[FILENAMELENGTH], plotcmd[FILENAMELENGTH];
    
     char fileres[FILENAMELENGTH], filerespij[FILENAMELENGTH], filereso[FILENAMELENGTH], fileresf[FILENAMELENGTH];;
   
   char filerest[FILENAMELENGTH];    char filerest[FILENAMELENGTH];
   char fileregp[FILENAMELENGTH];    char fileregp[FILENAMELENGTH];
   char popfile[FILENAMELENGTH];    char popfile[FILENAMELENGTH];
Line 1871  int main() Line 1913  int main()
   int ju,jl, mi;    int ju,jl, mi;
   int i1,j1, k1,k2,k3,jk,aa,bb, stepsize, ij;    int i1,j1, k1,k2,k3,jk,aa,bb, stepsize, ij;
   int jnais,jdc,jint4,jint1,jint2,jint3,**outcome,**adl,*tab;    int jnais,jdc,jint4,jint1,jint2,jint3,**outcome,**adl,*tab;
   int mobilav=0, fprev, lprev ,fprevfore=1, lprevfore=1,nforecast,popforecast=0;    int mobilav=0,popforecast=0;
   int hstepm, nhstepm;    int hstepm, nhstepm;
   int *popage;    int *popage;/*boolprev=0 if date and zero if wave*/
     double jprev1, mprev1,anprev1,jprev2, mprev2,anprev2;
   
   double bage, fage, age, agelim, agebase;    double bage, fage, age, agelim, agebase;
   double ftolpl=FTOL;    double ftolpl=FTOL;
Line 1889  int main() Line 1932  int main()
   double *epj, vepp;    double *epj, vepp;
   double kk1, kk2;    double kk1, kk2;
   double *popeffectif,*popcount;    double *popeffectif,*popcount;
     double dateprev1, dateprev2,jproj1,mproj1,anproj1,jproj2,mproj2,anproj2,jprojmean,mprojmean,anprojmean, calagedate;
     double yp,yp1,yp2;
   
   char version[80]="Imach version 64b, May 2001, INED-EUROREVES ";    char version[80]="Imach version 0.7, February 2002, INED-EUROREVES ";
   char *alph[]={"a","a","b","c","d","e"}, str[4];    char *alph[]={"a","a","b","c","d","e"}, str[4];
   
   
Line 1898  int main() Line 1943  int main()
 #include <sys/time.h>  #include <sys/time.h>
 #include <time.h>  #include <time.h>
   char stra[80], strb[80], strc[80], strd[80],stre[80],modelsav[80];    char stra[80], strb[80], strc[80], strd[80],stre[80],modelsav[80];
    
   /* long total_usecs;    /* long total_usecs;
   struct timeval start_time, end_time;    struct timeval start_time, end_time;
     
   gettimeofday(&start_time, (struct timezone*)0); */ /* at first time */    gettimeofday(&start_time, (struct timezone*)0); */ /* at first time */
   
   
   printf("\nIMACH, Version 0.7");    printf("\n%s",version);
   printf("\nEnter the parameter file name: ");    if(argc <=1){
       printf("\nEnter the parameter file name: ");
 #ifdef windows      scanf("%s",pathtot);
   scanf("%s",pathtot);    }
   getcwd(pathcd, size);    else{
       strcpy(pathtot,argv[1]);
     }
     /*if(getcwd(pathcd, 80)!= NULL)printf ("Error pathcd\n");*/
   /*cygwin_split_path(pathtot,path,optionfile);    /*cygwin_split_path(pathtot,path,optionfile);
     printf("pathtot=%s, path=%s, optionfile=%s\n",pathtot,path,optionfile);*/      printf("pathtot=%s, path=%s, optionfile=%s\n",pathtot,path,optionfile);*/
   /* cutv(path,optionfile,pathtot,'\\');*/    /* cutv(path,optionfile,pathtot,'\\');*/
   
 split(pathtot, path,optionfile);    split(pathtot,path,optionfile,optionfilext,optionfilefiname);
      printf("pathtot=%s, path=%s, optionfile=%s optionfilext=%s optionfilefiname=%s\n",pathtot,path,optionfile,optionfilext,optionfilefiname);
   chdir(path);    chdir(path);
   replace(pathc,path);    replace(pathc,path);
 #endif  
 #ifdef unix  
   scanf("%s",optionfile);  
 #endif  
   
 /*-------- arguments in the command line --------*/  /*-------- arguments in the command line --------*/
   
   strcpy(fileres,"r");    strcpy(fileres,"r");
   strcat(fileres, optionfile);    strcat(fileres, optionfilefiname);
     strcat(fileres,".txt");    /* Other files have txt extension */
   
   /*---------arguments file --------*/    /*---------arguments file --------*/
   
Line 1960  while((c=getc(ficpar))=='#' && c!= EOF){ Line 2007  while((c=getc(ficpar))=='#' && c!= EOF){
   }    }
   ungetc(c,ficpar);    ungetc(c,ficpar);
     
   fscanf(ficpar,"fprevalence=%d lprevalence=%d pop_based=%d\n",&fprev,&lprev,&popbased);     
   fprintf(ficparo,"fprevalence=%d lprevalence=%d pop_based=%d\n",fprev,lprev,popbased);  
    
  while((c=getc(ficpar))=='#' && c!= EOF){  
     ungetc(c,ficpar);  
     fgets(line, MAXLINE, ficpar);  
     puts(line);  
     fputs(line,ficparo);  
   }  
   ungetc(c,ficpar);  
    
   fscanf(ficpar,"fprevalence=%d lprevalence=%d nforecast=%d mob_average=%d\n",&fprevfore,&lprevfore,&nforecast,&mobilav);  
   fprintf(ficparo,"fprevalence=%d lprevalence=%d nforecast=%d mob_average=%d\n",fprevfore,lprevfore,nforecast,mobilav);  
        
    
 while((c=getc(ficpar))=='#' && c!= EOF){  
     ungetc(c,ficpar);  
     fgets(line, MAXLINE, ficpar);  
     puts(line);  
     fputs(line,ficparo);  
   }  
   ungetc(c,ficpar);  
    
   fscanf(ficpar,"popforecast=%d popfile=%s\n",&popforecast,popfile);  
    
   covar=matrix(0,NCOVMAX,1,n);    covar=matrix(0,NCOVMAX,1,n);
   cptcovn=0;    cptcovn=0;
   if (strlen(model)>1) cptcovn=nbocc(model,'+')+1;    if (strlen(model)>1) cptcovn=nbocc(model,'+')+1;
Line 2147  while((c=getc(ficpar))=='#' && c!= EOF){ Line 2170  while((c=getc(ficpar))=='#' && c!= EOF){
     if ((s[2][i]==3) && (s[3][i]==2)) s[3][i]=3;      if ((s[2][i]==3) && (s[3][i]==2)) s[3][i]=3;
     if ((s[3][i]==3) && (s[4][i]==2)) s[4][i]=3;      if ((s[3][i]==3) && (s[4][i]==2)) s[4][i]=3;
     }      }
     for (i=1; i<=imx; i++) printf("%d %.lf %.lf %.lf %.lf/%.lf %.lf/%.lf %.lf/%.lf %d %.lf/%.lf %d %.lf/%.lf %d %.lf/%.lf %d\n",num[i],(covar[1][i]), (covar[2][i]), (weight[i]), (moisnais[i]), (annais[i]), (moisdc[i]), (andc[i]), (mint[1][i]), (anint[1][i]), (s[1][i]),  (mint[2][i]), (anint[2][i]), (s[2][i]),  (mint[3][i]), (anint[3][i]), (s[3][i]),  (mint[4][i]), (anint[4][i]), (s[4][i]));*/  
       for (i=1; i<=imx; i++)
       if (covar[1][i]==0) printf("%d %.lf %.lf %.lf %.lf/%.lf %.lf/%.lf %.lf/%.lf %d %.lf/%.lf %d %.lf/%.lf %d %.lf/%.lf %d\n",num[i],(covar[1][i]), (covar[2][i]), (weight[i]), (moisnais[i]), (annais[i]), (moisdc[i]), (andc[i]), (mint[1][i]), (anint[1][i]), (s[1][i]),  (mint[2][i]), (anint[2][i]), (s[2][i]),  (mint[3][i]), (anint[3][i]), (s[3][i]),  (mint[4][i]), (anint[4][i]), (s[4][i]));*/
   
   /* Calculation of the number of parameter from char model*/    /* Calculation of the number of parameter from char model*/
   Tvar=ivector(1,15);    Tvar=ivector(1,15);
Line 2326  printf("Total number of individuals= %d, Line 2351  printf("Total number of individuals= %d,
        }         }
      }       }
    }     }
   
   
      /*for(i=1; i <=m ;i++){
        for(k=1; k <=cptcovn; k++){
          printf("i=%d k=%d %d %d",i,k,codtab[i][k], cptcoveff);
        }
        printf("\n");
      }
      scanf("%d",i);*/
         
    /* Calculates basic frequencies. Computes observed prevalence at single age     /* Calculates basic frequencies. Computes observed prevalence at single age
        and prints on file fileres'p'. */         and prints on file fileres'p'. */
   freqsummary(fileres, agemin, agemax, s, agev, nlstate, imx,Tvar,nbcode, ncodemax, fprev, lprev,mint,anint);  
       
   free_matrix(mint,1,maxwav,1,n);     
   free_matrix(anint,1,maxwav,1,n);      pmmij= matrix(1,nlstate+ndeath,1,nlstate+ndeath); /* creation */
    
   pmmij= matrix(1,nlstate+ndeath,1,nlstate+ndeath); /* creation */  
     oldms= matrix(1,nlstate+ndeath,1,nlstate+ndeath); /* creation */      oldms= matrix(1,nlstate+ndeath,1,nlstate+ndeath); /* creation */
     newms= matrix(1,nlstate+ndeath,1,nlstate+ndeath); /* creation */      newms= matrix(1,nlstate+ndeath,1,nlstate+ndeath); /* creation */
     savms= matrix(1,nlstate+ndeath,1,nlstate+ndeath); /* creation */      savms= matrix(1,nlstate+ndeath,1,nlstate+ndeath); /* creation */
Line 2350  printf("Total number of individuals= %d, Line 2382  printf("Total number of individuals= %d,
         
     /*--------- results files --------------*/      /*--------- results files --------------*/
     fprintf(ficres,"title=%s datafile=%s lastobs=%d firstpass=%d lastpass=%d\nftol=%e stepm=%d ncov=%d nlstate=%d ndeath=%d maxwav=%d mle=%d weight=%d\nmodel=%s\n", title, datafile, lastobs, firstpass,lastpass,ftol, stepm, ncov, nlstate, ndeath, maxwav, mle,weightopt,model);      fprintf(ficres,"title=%s datafile=%s lastobs=%d firstpass=%d lastpass=%d\nftol=%e stepm=%d ncov=%d nlstate=%d ndeath=%d maxwav=%d mle=%d weight=%d\nmodel=%s\n", title, datafile, lastobs, firstpass,lastpass,ftol, stepm, ncov, nlstate, ndeath, maxwav, mle,weightopt,model);
    fprintf(ficres,"fprevalence=%d lprevalence=%d pop_based=%d\n",fprev,lprev,popbased);   
    fprintf(ficres,"fprevalence=%d lprevalence=%d nforecast=%d mob_average=%d\n",fprevfore,lprevfore,nforecast,mobilav);  
   
    jk=1;     jk=1;
    fprintf(ficres,"# Parameters\n");     fprintf(ficres,"# Parameters\n");
Line 2393  printf("Total number of individuals= %d, Line 2424  printf("Total number of individuals= %d,
           fprintf(ficres,"\n");            fprintf(ficres,"\n");
         }          }
       }        }
       }       }
         
     k=1;      k=1;
     fprintf(ficres,"# Covariance\n");      fprintf(ficres,"# Covariance\n");
Line 2428  printf("Total number of individuals= %d, Line 2459  printf("Total number of individuals= %d,
       bage = agemin;        bage = agemin;
       fage = agemax;        fage = agemax;
     }      }
      
     fprintf(ficres,"# agemin agemax for life expectancy, bage fage (if mle==0 ie no data nor Max likelihood).\n");      fprintf(ficres,"# agemin agemax for life expectancy, bage fage (if mle==0 ie no data nor Max likelihood).\n");
     fprintf(ficres,"agemin=%.0f agemax=%.0f bage=%.0f fage=%.0f\n",agemin,agemax,bage,fage);      fprintf(ficres,"agemin=%.0f agemax=%.0f bage=%.0f fage=%.0f\n",agemin,agemax,bage,fage);
       fprintf(ficparo,"agemin=%.0f agemax=%.0f bage=%.0f fage=%.0f\n",agemin,agemax,bage,fage);
    
       while((c=getc(ficpar))=='#' && c!= EOF){
       ungetc(c,ficpar);
       fgets(line, MAXLINE, ficpar);
       puts(line);
       fputs(line,ficparo);
     }
     ungetc(c,ficpar);
    
     fscanf(ficpar,"begin-prev-date=%lf/%lf/%lf end-prev-date=%lf/%lf/%lf mob_average=%d\n",&jprev1, &mprev1,&anprev1,&jprev2, &mprev2,&anprev2,&mobilav);
     fprintf(ficparo,"begin-prev-date=%.lf/%.lf/%.lf end-prev-date=%.lf/%.lf/%.lf mob_average=%d\n",jprev1, mprev1,anprev1,jprev2, mprev2,anprev2,mobilav);
    fprintf(ficres,"begin-prev-date=%.lf/%.lf/%.lf end-prev-date=%.lf/%.lf/%.lf mob_average=%d\n",jprev1, mprev1,anprev1,jprev2, mprev2,anprev2,mobilav);
        
     while((c=getc(ficpar))=='#' && c!= EOF){
       ungetc(c,ficpar);
       fgets(line, MAXLINE, ficpar);
       puts(line);
       fputs(line,ficparo);
     }
     ungetc(c,ficpar);
    
   
         dateprev1=anprev1+mprev1/12.+jprev1/365.;
 /*------------ gnuplot -------------*/     dateprev2=anprev2+mprev2/12.+jprev2/365.;
 chdir(pathcd);  
   if((ficgp=fopen("graph.plt","w"))==NULL) {    fscanf(ficpar,"pop_based=%d\n",&popbased);
     printf("Problem with file graph.gp");goto end;     fprintf(ficparo,"pop_based=%d\n",popbased);  
      fprintf(ficres,"pop_based=%d\n",popbased);  
   
     while((c=getc(ficpar))=='#' && c!= EOF){
       ungetc(c,ficpar);
       fgets(line, MAXLINE, ficpar);
       puts(line);
       fputs(line,ficparo);
   }    }
     ungetc(c,ficpar);
     fscanf(ficpar,"popforecast=%d popfile=%s starting-proj-date=%lf/%lf/%lf final-proj-date=%lf/%lf/%lf\n",&popforecast,popfile,&jproj1,&mproj1,&anproj1,&jproj2,&mproj2,&anproj2);
   fprintf(ficparo,"popforecast=%d popfile=%s starting-proj-date=%.lf/%.lf/%.lf final-proj-date=%.lf/%.lf/%.lf\n",popforecast,popfile,jproj1,mproj1,anproj1,jproj2,mproj2,anproj2);
   fprintf(ficres,"popforecast=%d popfile=%s starting-proj-date=%.lf/%.lf/%.lf final-proj-date=%.lf/%.lf/%.lf\n",popforecast,popfile,jproj1,mproj1,anproj1,jproj2,mproj2,anproj2);
   
    freqsummary(fileres, agemin, agemax, s, agev, nlstate, imx,Tvar,nbcode, ncodemax,mint,anint,dateprev1,dateprev2);
   
      
       /*------------ gnuplot -------------*/
       /*chdir(pathcd);*/
       strcpy(optionfilegnuplot,optionfilefiname);
       strcat(optionfilegnuplot,".plt");
       if((ficgp=fopen(optionfilegnuplot,"w"))==NULL) {
         printf("Problem with file %s",optionfilegnuplot);goto end;
       }
 #ifdef windows  #ifdef windows
   fprintf(ficgp,"cd \"%s\" \n",pathc);      fprintf(ficgp,"cd \"%s\" \n",pathc);
 #endif  #endif
 m=pow(2,cptcoveff);  m=pow(2,cptcoveff);
     
Line 2596  ij=1; Line 2671  ij=1;
   }    }
         
   fclose(ficgp);    fclose(ficgp);
     /* end gnuplot */
         
 chdir(path);  chdir(path);
         
Line 2649  Interval (in months) between two waves: Line 2725  Interval (in months) between two waves:
         - Variances of life expectancies by age and initial health status: <a href=\"v%s\">v%s</a><br>          - Variances of life expectancies by age and initial health status: <a href=\"v%s\">v%s</a><br>
         - Health expectancies with their variances: <a href=\"t%s\">t%s</a> <br>          - Health expectancies with their variances: <a href=\"t%s\">t%s</a> <br>
         - Standard deviation of stationary prevalences: <a href=\"vpl%s\">vpl%s</a> <br>          - Standard deviation of stationary prevalences: <a href=\"vpl%s\">vpl%s</a> <br>
         - Prevalences forecasting: <a href=\"f%s\">f%s</a> <br>          - Prevalences and population forecasting: <a href=\"f%s\">f%s</a> <br>
 <br>",title,datafile,firstpass,lastpass,stepm, weightopt,model,imx,jmin,jmax,jmean,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres);  <br>",title,datafile,firstpass,lastpass,stepm, weightopt,model,imx,jmin,jmax,jmean,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres,fileres);
   
  fprintf(fichtm," <li>Graphs</li><p>");   fprintf(fichtm," <li>Graphs</li><p>");
Line 2788  fclose(fichtm); Line 2864  fclose(fichtm);
   
   fclose(ficrespij);    fclose(ficrespij);
   
     if(stepm == 1) {
   /*---------- Forecasting ------------------*/    /*---------- Forecasting ------------------*/
     calagedate=(anproj1+mproj1/12.+jproj1/365.-dateintmean)*YEARM;
   
     /*printf("calage= %f", calagedate);*/
    
     prevalence(agemin, agemax, s, agev, nlstate, imx,Tvar,nbcode, ncodemax,mint,anint,dateprev1,dateprev2, calagedate);
   
   
   strcpy(fileresf,"f");    strcpy(fileresf,"f");
   strcat(fileresf,fileres);    strcat(fileresf,fileres);
Line 2797  fclose(fichtm); Line 2880  fclose(fichtm);
   }    }
   printf("Computing forecasting: result on file '%s' \n", fileresf);    printf("Computing forecasting: result on file '%s' \n", fileresf);
   
   prevalence(agemin, agemax, s, agev, nlstate, imx,Tvar,nbcode, ncodemax, fprevfore, lprevfore);    free_matrix(mint,1,maxwav,1,n);
     free_matrix(anint,1,maxwav,1,n);
  free_matrix(agev,1,maxwav,1,imx);    free_matrix(agev,1,maxwav,1,imx);
   /* Mobile average */    /* Mobile average */
   
   if (cptcoveff==0) ncodemax[cptcoveff]=1;    if (cptcoveff==0) ncodemax[cptcoveff]=1;
Line 2827  fclose(fichtm); Line 2910  fclose(fichtm);
   if (stepm<=12) stepsize=1;    if (stepm<=12) stepsize=1;
   
   agelim=AGESUP;    agelim=AGESUP;
   hstepm=stepsize*YEARM; /* Every year of age */    /*hstepm=stepsize*YEARM; *//* Every year of age */
     hstepm=1;
   hstepm=hstepm/stepm; /* Typically 2 years, = 2 years/6 months = 4 */    hstepm=hstepm/stepm; /* Typically 2 years, = 2 years/6 months = 4 */
      yp1=modf(dateintmean,&yp);
     anprojmean=yp;
     yp2=modf((yp1*12),&yp);
     mprojmean=yp;
     yp1=modf((yp2*30.5),&yp);
     jprojmean=yp;
     if(jprojmean==0) jprojmean=1;
     if(mprojmean==0) jprojmean=1;
   
     fprintf(ficresf,"# Estimated date of observed prevalence: %.lf/%.lf/%.lf ",jprojmean,mprojmean,anprojmean);
   
   if (popforecast==1) {    if (popforecast==1) {
     if((ficpop=fopen(popfile,"r"))==NULL)    {      if((ficpop=fopen(popfile,"r"))==NULL)    {
       printf("Problem with population file : %s\n",popfile);goto end;        printf("Problem with population file : %s\n",popfile);goto end;
Line 2844  fclose(fichtm); Line 2938  fclose(fichtm);
         i=i+1;          i=i+1;
       }        }
     imx=i;      imx=i;
       
   for (i=1; i<imx;i++) popeffectif[popage[i]]=popcount[i];      for (i=1; i<imx;i++) popeffectif[popage[i]]=popcount[i];
   }    }
   
   for(cptcov=1;cptcov<=i1;cptcov++){    for(cptcov=1;cptcov<=i1;cptcov++){
     for(cptcod=1;cptcod<=ncodemax[cptcoveff];cptcod++){      for(cptcod=1;cptcod<=ncodemax[cptcoveff];cptcod++){
       k=k+1;        k=k+1;
       fprintf(ficresf,"\n#****** ");        fprintf(ficresf,"\n#******");
       for(j=1;j<=cptcoveff;j++) {        for(j=1;j<=cptcoveff;j++) {
         fprintf(ficresf,"V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtab[k][j]]);          fprintf(ficresf," V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtab[k][j]]);
       }        }
       fprintf(ficresf,"******\n");        fprintf(ficresf,"******\n");
       fprintf(ficresf,"# StartingAge FinalAge Horizon(in years)");        fprintf(ficresf,"# StartingAge FinalAge");
       for(j=1; j<=nlstate+ndeath;j++) fprintf(ficresf," P.%d",j);        for(j=1; j<=nlstate+ndeath;j++) fprintf(ficresf," P.%d",j);
       if (popforecast==1)  fprintf(ficresf," [Population]");        if (popforecast==1)  fprintf(ficresf," [Population]");
      
       for (agedeb=fage; agedeb>=bage; agedeb--){        for (cpt=0; cpt<4;cpt++) {
         fprintf(ficresf,"\n%.f %.f 0",agedeb, agedeb);  
        if (mobilav==1) {  
         for(j=1; j<=nlstate;j++)  
           fprintf(ficresf," %.3f",mobaverage[(int)agedeb][j][cptcod]);  
         }  
         else {  
           for(j=1; j<=nlstate;j++)  
           fprintf(ficresf," %.3f",probs[(int)agedeb][j][cptcod]);  
         }    
   
        for(j=1; j<=ndeath;j++) fprintf(ficresf," 0.00000");  
        if (popforecast==1) fprintf(ficresf," [%.f] ",popeffectif[(int)agedeb]);  
       }  
        
       for (cpt=1; cpt<=nforecast;cpt++) {  
         fprintf(ficresf,"\n");          fprintf(ficresf,"\n");
       for (agedeb=fage; agedeb>=bage; agedeb--){ /* If stepm=6 months */          fprintf(ficresf,"\n# Forecasting at date %.lf/%.lf/%.lf ",jproj1,mproj1,anproj1+cpt);  
   
           for (agedeb=(fage-((int)calagedate %12/12.)); agedeb>=(bage-((int)calagedate %12)/12.); agedeb--){ /* If stepm=6 months */
         nhstepm=(int) rint((agelim-agedeb)*YEARM/stepm);          nhstepm=(int) rint((agelim-agedeb)*YEARM/stepm);
         nhstepm = nhstepm/hstepm;          nhstepm = nhstepm/hstepm;
         /*printf("agedeb=%.lf stepm=%d hstepm=%d nhstepm=%d \n",agedeb,stepm,hstepm,nhstepm);*/          /*printf("agedeb=%.lf stepm=%d hstepm=%d nhstepm=%d \n",agedeb,stepm,hstepm,nhstepm);*/
Line 2885  fclose(fichtm); Line 2966  fclose(fichtm);
         p3mat=ma3x(1,nlstate+ndeath,1, nlstate+ndeath, 0,nhstepm);          p3mat=ma3x(1,nlstate+ndeath,1, nlstate+ndeath, 0,nhstepm);
         oldm=oldms;savm=savms;          oldm=oldms;savm=savms;
         hpxij(p3mat,nhstepm,agedeb,hstepm,p,nlstate,stepm,oldm,savm, k);            hpxij(p3mat,nhstepm,agedeb,hstepm,p,nlstate,stepm,oldm,savm, k);  
                  
         for (h=0; h<=nhstepm; h++){  
                 
          if (h*hstepm/YEARM*stepm==cpt)          for (h=0; h<=nhstepm; h++){
             fprintf(ficresf,"\n%.f %.f %.f",agedeb, agedeb+ h*hstepm/YEARM*stepm, h*hstepm/YEARM*stepm);            if (h==(int) (calagedate+YEARM*cpt)) {
               fprintf(ficresf,"\n %.f ",agedeb+h*hstepm/YEARM*stepm);
             }
             for(j=1; j<=nlstate+ndeath;j++) {
               kk1=0.;kk2=0;
               for(i=1; i<=nlstate;i++) {        
                 if (mobilav==1)
                   kk1=kk1+p3mat[i][j][h]*mobaverage[(int)agedeb+1][i][cptcod];
                 else {
                   kk1=kk1+p3mat[i][j][h]*probs[(int)(agedeb+1)][i][cptcod];
                   /* fprintf(ficresf," p3=%.3f p=%.3f ", p3mat[i][j][h], probs[(int)(agedeb)+1][i][cptcod]);*/
                 }
   
                 if (popforecast==1) kk2=kk1*popeffectif[(int)agedeb];
               }
                     
                        if (h==(int)(calagedate+12*cpt)){
          for(j=1; j<=nlstate+ndeath;j++) {                fprintf(ficresf," %.3f", kk1);
            kk1=0.;kk2=0;               
            for(i=1; i<=nlstate;i++) {                        if (popforecast==1) fprintf(ficresf," [%.f]", kk2);
              if (mobilav==1)  
                 kk1=kk1+p3mat[i][j][h]*mobaverage[(int)agedeb][i][cptcod];  
              else kk1=kk1+p3mat[i][j][h]*probs[(int)agedeb][i][cptcod];  
              if (popforecast==1) kk2=kk1*popeffectif[(int)agedeb];  
             }              }
            if (h*hstepm/YEARM*stepm==cpt) {  
              fprintf(ficresf," %.3f", kk1);  
                if (popforecast==1) fprintf(ficresf," [%.f]", kk2);  
            }  
           }            }
         }          }
         free_ma3x(p3mat,1,nlstate+ndeath,1, nlstate+ndeath, 0,nhstepm);          free_ma3x(p3mat,1,nlstate+ndeath,1, nlstate+ndeath, 0,nhstepm);
          
       }        }
       }        }
     }      }
Line 2921  fclose(fichtm); Line 3005  fclose(fichtm);
   free_imatrix(s,1,maxwav+1,1,n);    free_imatrix(s,1,maxwav+1,1,n);
   free_vector(weight,1,n);    free_vector(weight,1,n);
   fclose(ficresf);    fclose(ficresf);
     }/* End forecasting */
     else{
       erreur=108;
       printf("Error %d!! You can only forecast the prevalences if the optimization\n  has been performed with stepm = 1 (month) instead of %d\n", erreur, stepm);
     }
   
   /*---------- Health expectancies and variances ------------*/    /*---------- Health expectancies and variances ------------*/
   
   strcpy(filerest,"t");    strcpy(filerest,"t");
Line 3058  strcpy(fileresvpl,"vpl"); Line 3148  strcpy(fileresvpl,"vpl");
     
   free_ma3x(param,1,nlstate,1, nlstate+ndeath-1,1,ncovmodel);    free_ma3x(param,1,nlstate,1, nlstate+ndeath-1,1,ncovmodel);
   
   printf("End of Imach\n");    if(erreur >0)
       printf("End of Imach with error %d\n",erreur);
     else   printf("End of Imach\n");
   /*  gettimeofday(&end_time, (struct timezone*)0);*/  /* after time */    /*  gettimeofday(&end_time, (struct timezone*)0);*/  /* after time */
     
   /* printf("Total time was %d Sec. %d uSec.\n", end_time.tv_sec -start_time.tv_sec, end_time.tv_usec -start_time.tv_usec);*/    /* printf("Total time was %d Sec. %d uSec.\n", end_time.tv_sec -start_time.tv_sec, end_time.tv_usec -start_time.tv_usec);*/
Line 3068  strcpy(fileresvpl,"vpl"); Line 3160  strcpy(fileresvpl,"vpl");
   
  end:   end:
 #ifdef windows  #ifdef windows
  chdir(pathcd);    /* chdir(pathcd);*/
 #endif  #endif
     /*system("wgnuplot graph.plt");*/
  system("..\\gp37mgw\\wgnuplot graph.plt");   /*system("../gp37mgw/wgnuplot graph.plt");*/
    /*system("cd ../gp37mgw");*/
    /* system("..\\gp37mgw\\wgnuplot graph.plt");*/
    strcpy(plotcmd,GNUPLOTPROGRAM);
    strcat(plotcmd," ");
    strcat(plotcmd,optionfilegnuplot);
    system(plotcmd);
   
 #ifdef windows  #ifdef windows
   while (z[0] != 'q') {    while (z[0] != 'q') {
     chdir(pathcd);      chdir(path);
     printf("\nType e to edit output files, c to start again, and q for exiting: ");      printf("\nType e to edit output files, c to start again, and q for exiting: ");
     scanf("%s",z);      scanf("%s",z);
     if (z[0] == 'c') system("./imach");      if (z[0] == 'c') system("./imach");
Removed from v.1.17  
changed lines
  Added in v.1.22

FreeBSD-CVSweb <freebsd-cvsweb@FreeBSD.org>