version 1.350, 2023/04/24 11:38:06
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version 1.353, 2023/05/08 18:48:22
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/* $Id$ |
/* $Id$ |
$State$ |
$State$ |
$Log$ |
$Log$ |
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Revision 1.353 2023/05/08 18:48:22 brouard |
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*** empty log message *** |
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Revision 1.352 2023/04/29 10:46:21 brouard |
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*** empty log message *** |
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Revision 1.351 2023/04/29 10:43:47 brouard |
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Summary: 099r45 |
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Revision 1.350 2023/04/24 11:38:06 brouard |
Revision 1.350 2023/04/24 11:38:06 brouard |
*** empty log message *** |
*** empty log message *** |
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Line 1365 double gnuplotversion=GNUPLOTVERSION;
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Line 1374 double gnuplotversion=GNUPLOTVERSION;
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/* $State$ */ |
/* $State$ */ |
#include "version.h" |
#include "version.h" |
char version[]=__IMACH_VERSION__; |
char version[]=__IMACH_VERSION__; |
char copyright[]="January 2023,INED-EUROREVES-Institut de longevite-Japan Society for the Promotion of Science (Grant-in-Aid for Scientific Research 25293121), Intel Software 2015-2020, Nihon University 2021-202, INED 2000-2022"; |
char copyright[]="April 2023,INED-EUROREVES-Institut de longevite-Japan Society for the Promotion of Science (Grant-in-Aid for Scientific Research 25293121), Intel Software 2015-2020, Nihon University 2021-202, INED 2000-2022"; |
char fullversion[]="$Revision$ $Date$"; |
char fullversion[]="$Revision$ $Date$"; |
char strstart[80]; |
char strstart[80]; |
char optionfilext[10], optionfilefiname[FILENAMELENGTH]; |
char optionfilext[10], optionfilefiname[FILENAMELENGTH]; |
Line 1804 char *trimbb(char *out, char *in)
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Line 1813 char *trimbb(char *out, char *in)
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return s; |
return s; |
} |
} |
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char *trimbtab(char *out, char *in) |
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{ /* Trim blanks or tabs in line but keeps first blanks if line starts with blanks */ |
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char *s; |
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s=out; |
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while (*in != '\0'){ |
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while( (*in == ' ' || *in == '\t')){ /* && *(in+1) != '\0'){*/ |
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in++; |
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} |
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*out++ = *in++; |
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} |
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*out='\0'; |
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return s; |
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} |
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/* char *substrchaine(char *out, char *in, char *chain) */ |
/* char *substrchaine(char *out, char *in, char *chain) */ |
/* { */ |
/* { */ |
/* /\* Substract chain 'chain' from 'in', return and output 'out' *\/ */ |
/* /\* Substract chain 'chain' from 'in', return and output 'out' *\/ */ |
Line 9095 set ter svg size 640, 480\nunset log y\n
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Line 9118 set ter svg size 640, 480\nunset log y\n
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fprintf(ficgp," u %d:(",ioffset); |
fprintf(ficgp," u %d:(",ioffset); |
kl=0; |
kl=0; |
strcpy(gplotcondition,"("); |
strcpy(gplotcondition,"("); |
for (k=1; k<=cptcoveff; k++){ /* For each covariate writing the chain of conditions */ |
/* for (k=1; k<=cptcoveff; k++){ /\* For each covariate writing the chain of conditions *\/ */ |
/* lv= decodtabm(k1,k,cptcoveff); /\* Should be the covariate value corresponding to combination k1 and covariate k *\/ */ |
/* lv= decodtabm(k1,k,cptcoveff); /\* Should be the covariate value corresponding to combination k1 and covariate k *\/ */ |
lv=codtabm(k1,TnsdVar[Tvaraff[k]]); |
for (k=1; k<=cptcovs; k++){ /* For each covariate k get corresponding value lv for combination k1 */ |
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/* lv=codtabm(k1,TnsdVar[Tvaraff[k]]); */ |
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lv=Tvresult[nres][k]; |
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vlv=TinvDoQresult[nres][Tvresult[nres][k]]; |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,1,4) = 1 because h=1 k= (1) 1 1 1 */ |
/* decodtabm(1,2,4) = 1 because h=1 k= 1 (1) 1 1 */ |
/* decodtabm(1,2,4) = 1 because h=1 k= 1 (1) 1 1 */ |
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
/* decodtabm(13,3,4)= 2 because h=13 k= 1 1 (2) 2 */ |
/* vlv= nbcode[Tvaraff[k]][lv]; /\* Value of the modality of Tvaraff[k] *\/ */ |
/* vlv= nbcode[Tvaraff[k]][lv]; /\* Value of the modality of Tvaraff[k] *\/ */ |
vlv= nbcode[Tvaraff[k]][codtabm(k1,TnsdVar[Tvaraff[k]])]; |
/* vlv= nbcode[Tvaraff[k]][codtabm(k1,TnsdVar[Tvaraff[k]])]; */ |
kl++; |
kl++; |
sprintf(gplotcondition+strlen(gplotcondition),"$%d==%d && $%d==%d " ,kl,Tvaraff[k], kl+1, nbcode[Tvaraff[k]][lv]); |
/* sprintf(gplotcondition+strlen(gplotcondition),"$%d==%d && $%d==%d " ,kl,Tvaraff[k], kl+1, nbcode[Tvaraff[k]][lv]); */ |
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sprintf(gplotcondition+strlen(gplotcondition),"$%d==%d && $%d==%d " ,kl,lv, kl+1, vlv ); |
kl++; |
kl++; |
if(k <cptcoveff && cptcoveff>1) |
if(k <cptcovs && cptcovs>1) |
sprintf(gplotcondition+strlen(gplotcondition)," && "); |
sprintf(gplotcondition+strlen(gplotcondition)," && "); |
} |
} |
strcpy(gplotcondition+strlen(gplotcondition),")"); |
strcpy(gplotcondition+strlen(gplotcondition),")"); |
Line 9190 set ter svg size 640, 480\nunset log y\n
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Line 9217 set ter svg size 640, 480\nunset log y\n
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}else{ |
}else{ |
fprintf(ficgp,",\\\n '' "); |
fprintf(ficgp,",\\\n '' "); |
} |
} |
if(cptcoveff ==0){ /* No covariate */ |
/* if(cptcoveff ==0){ /\* No covariate *\/ */ |
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if(cptcovs ==0){ /* No covariate */ |
ioffset=2; /* Age is in 2 */ |
ioffset=2; /* Age is in 2 */ |
/*# yearproj age p11 p21 p31 p.1 p12 p22 p32 p.2 p13 p23 p33 p.3 p14 p24 p34 p.4*/ |
/*# yearproj age p11 p21 p31 p.1 p12 p22 p32 p.2 p13 p23 p33 p.3 p14 p24 p34 p.4*/ |
/*# 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 */ |
/*# 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 */ |
Line 9302 set ter svg size 640, 480\nunset log y\n
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Line 9330 set ter svg size 640, 480\nunset log y\n
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fprintf(ficgp,"#Number of graphics: first is logit, 2nd is probabilities, third is incidences per year\n"); |
fprintf(ficgp,"#Number of graphics: first is logit, 2nd is probabilities, third is incidences per year\n"); |
fprintf(ficgp,"#model=1+age+%s \n",model); |
fprintf(ficgp,"#model=1+age+%s \n",model); |
fprintf(ficgp,"# Type of graphic ng=%d\n",ng); |
fprintf(ficgp,"# Type of graphic ng=%d\n",ng); |
fprintf(ficgp,"# k1=1 to 2^%d=%d\n",cptcoveff,m);/* to be checked */ |
/* fprintf(ficgp,"# k1=1 to 2^%d=%d\n",cptcoveff,m);/\* to be checked *\/ */ |
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fprintf(ficgp,"# k1=1 to 2^%d=%d\n",cptcovs,m);/* to be checked */ |
/* for(k1=1; k1 <=m; k1++) /\* For each combination of covariate *\/ */ |
/* for(k1=1; k1 <=m; k1++) /\* For each combination of covariate *\/ */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
/* k1=nres; */ |
/* k1=nres; */ |
Line 9920 void prevforecast(char fileres[], double
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Line 9949 void prevforecast(char fileres[], double
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/* date2dmy(dateintmean,&jintmean,&mintmean,&aintmean); */ |
/* date2dmy(dateintmean,&jintmean,&mintmean,&aintmean); */ |
/* date2dmy(dateprojd,&jprojd, &mprojd, &anprojd); */ |
/* date2dmy(dateprojd,&jprojd, &mprojd, &anprojd); */ |
/* date2dmy(dateprojf,&jprojf, &mprojf, &anprojf); */ |
/* date2dmy(dateprojf,&jprojf, &mprojf, &anprojf); */ |
i1=pow(2,cptcoveff); |
/* i1=pow(2,cptcoveff); */ |
if (cptcovn < 1){i1=1;} |
/* if (cptcovn < 1){i1=1;} */ |
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fprintf(ficresf,"# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
fprintf(ficresf,"# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
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fprintf(ficresf,"#****** Routine prevforecast **\n"); |
fprintf(ficresf,"#****** Routine prevforecast **\n"); |
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/* if (h==(int)(YEARM*yearp)){ */ |
/* if (h==(int)(YEARM*yearp)){ */ |
for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
for(k=1; k<=i1;k++){ /* We want to find the combination k corresponding to the values of the dummies given in this resut line (to be cleaned one day) */ |
k=TKresult[nres]; |
if(i1 != 1 && TKresult[nres]!= k) |
if(TKresult[nres]==0) k=1; /* To be checked for noresult */ |
continue; |
/* for(k=1; k<=i1;k++){ /\* We want to find the combination k corresponding to the values of the dummies given in this resut line (to be cleaned one day) *\/ */ |
if(invalidvarcomb[k]){ |
/* if(i1 != 1 && TKresult[nres]!= k) */ |
printf("\nCombination (%d) projection ignored because no cases \n",k); |
/* continue; */ |
continue; |
/* if(invalidvarcomb[k]){ */ |
} |
/* printf("\nCombination (%d) projection ignored because no cases \n",k); */ |
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/* continue; */ |
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/* } */ |
fprintf(ficresf,"\n#****** hpijx=probability over h years, hp.jx is weighted by observed prev \n#"); |
fprintf(ficresf,"\n#****** hpijx=probability over h years, hp.jx is weighted by observed prev \n#"); |
for(j=1;j<=cptcoveff;j++) { |
for(j=1;j<=cptcovs;j++){ |
/* fprintf(ficresf," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,Tvaraff[j])]); */ |
/* for(j=1;j<=cptcoveff;j++) { */ |
fprintf(ficresf," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); |
/* /\* fprintf(ficresf," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,Tvaraff[j])]); *\/ */ |
} |
/* fprintf(ficresf," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
/* } */ |
fprintf(ficresf," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
/* for (k4=1; k4<= nsq; k4++){ /\* For each selected (single) quantitative value *\/ */ |
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/* fprintf(ficresf," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); */ |
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/* } */ |
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fprintf(ficresf," V%d=%lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
} |
} |
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fprintf(ficresf," yearproj age"); |
fprintf(ficresf," yearproj age"); |
for(j=1; j<=nlstate+ndeath;j++){ |
for(j=1; j<=nlstate+ndeath;j++){ |
for(i=1; i<=nlstate;i++) |
for(i=1; i<=nlstate;i++) |
Line 9968 void prevforecast(char fileres[], double
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Line 10003 void prevforecast(char fileres[], double
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} |
} |
} |
} |
fprintf(ficresf,"\n"); |
fprintf(ficresf,"\n"); |
for(j=1;j<=cptcoveff;j++) |
/* for(j=1;j<=cptcoveff;j++) */ |
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for(j=1;j<=cptcovs;j++) |
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fprintf(ficresf,"%d %lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
/* fprintf(ficresf,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,Tvaraff[j])]); /\* Tvaraff not correct *\/ */ |
/* fprintf(ficresf,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,Tvaraff[j])]); /\* Tvaraff not correct *\/ */ |
fprintf(ficresf,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); /* TnsdVar[Tvaraff] correct */ |
/* fprintf(ficresf,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); /\* TnsdVar[Tvaraff] correct *\/ */ |
fprintf(ficresf,"%.f %.f ",anprojd+yearp,agec+h*hstepm/YEARM*stepm); |
fprintf(ficresf,"%.f %.f ",anprojd+yearp,agec+h*hstepm/YEARM*stepm); |
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for(j=1; j<=nlstate+ndeath;j++) { |
for(j=1; j<=nlstate+ndeath;j++) { |
Line 10062 void prevforecast(char fileres[], double
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Line 10099 void prevforecast(char fileres[], double
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/* if(jintmean==0) jintmean=1; */ |
/* if(jintmean==0) jintmean=1; */ |
/* if(mintmean==0) jintmean=1; */ |
/* if(mintmean==0) jintmean=1; */ |
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i1=pow(2,cptcoveff); |
/* i1=pow(2,cptcoveff); */ |
if (cptcovn < 1){i1=1;} |
/* if (cptcovn < 1){i1=1;} */ |
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fprintf(ficresfb,"# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
fprintf(ficresfb,"# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
printf("# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
printf("# Mean day of interviews %.lf/%.lf/%.lf (%.2f) between %.2f and %.2f \n",jintmean,mintmean,aintmean,dateintmean,dateprev1,dateprev2); |
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fprintf(ficresfb,"#****** Routine prevbackforecast **\n"); |
fprintf(ficresfb,"#****** Routine prevbackforecast **\n"); |
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for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
for(k=1; k<=i1;k++){ |
k=TKresult[nres]; |
if(i1 != 1 && TKresult[nres]!= k) |
if(TKresult[nres]==0) k=1; /* To be checked for noresult */ |
continue; |
/* for(k=1; k<=i1;k++){ */ |
if(invalidvarcomb[k]){ |
/* if(i1 != 1 && TKresult[nres]!= k) */ |
printf("\nCombination (%d) projection ignored because no cases \n",k); |
/* continue; */ |
continue; |
/* if(invalidvarcomb[k]){ */ |
} |
/* printf("\nCombination (%d) projection ignored because no cases \n",k); */ |
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/* continue; */ |
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/* } */ |
fprintf(ficresfb,"\n#****** hbijx=probability over h years, hb.jx is weighted by observed prev \n#"); |
fprintf(ficresfb,"\n#****** hbijx=probability over h years, hb.jx is weighted by observed prev \n#"); |
for(j=1;j<=cptcoveff;j++) { |
for(j=1;j<=cptcovs;j++){ |
fprintf(ficresfb," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); |
/* for(j=1;j<=cptcoveff;j++) { */ |
} |
/* fprintf(ficresfb," V%d (=) %d",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); */ |
for (k4=1; k4<= nsq; k4++){ /* For each selected (single) quantitative value */ |
/* } */ |
fprintf(ficresf," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); |
fprintf(ficresfb," V%d=%lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
} |
} |
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/* fprintf(ficrespij,"******\n"); */ |
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/* for (k4=1; k4<= nsq; k4++){ /\* For each selected (single) quantitative value *\/ */ |
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/* fprintf(ficresfb," V%d=%f ",Tvqresult[nres][k4],Tqresult[nres][k4]); */ |
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/* } */ |
fprintf(ficresfb," yearbproj age"); |
fprintf(ficresfb," yearbproj age"); |
for(j=1; j<=nlstate+ndeath;j++){ |
for(j=1; j<=nlstate+ndeath;j++){ |
for(i=1; i<=nlstate;i++) |
for(i=1; i<=nlstate;i++) |
Line 10115 void prevforecast(char fileres[], double
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Line 10158 void prevforecast(char fileres[], double
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} |
} |
} |
} |
fprintf(ficresfb,"\n"); |
fprintf(ficresfb,"\n"); |
for(j=1;j<=cptcoveff;j++) |
/* for(j=1;j<=cptcoveff;j++) */ |
fprintf(ficresfb,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); |
for(j=1;j<=cptcovs;j++) |
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fprintf(ficresfb,"%d %lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
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/* fprintf(ficresfb,"%d %d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); */ |
fprintf(ficresfb,"%.f %.f ",anbackd+yearp,agec-h*hstepm/YEARM*stepm); |
fprintf(ficresfb,"%.f %.f ",anbackd+yearp,agec-h*hstepm/YEARM*stepm); |
for(i=1; i<=nlstate+ndeath;i++) { |
for(i=1; i<=nlstate+ndeath;i++) { |
ppij=0.;ppi=0.; |
ppij=0.;ppi=0.; |
Line 11080 int decoderesult( char resultline[], int
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Line 11125 int decoderesult( char resultline[], int
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if (strlen(resultsav) >1){ |
if (strlen(resultsav) >1){ |
j=nbocc(resultsav,'='); /**< j=Number of covariate values'=' in this resultline */ |
j=nbocc(resultsav,'='); /**< j=Number of covariate values'=' in this resultline */ |
} |
} |
if(j == 0){ /* Resultline but no = */ |
if(j == 0 && cptcovs== 0){ /* Resultline but no = and no covariate in the model */ |
TKresult[nres]=0; /* Combination for the nresult and the model */ |
TKresult[nres]=0; /* Combination for the nresult and the model */ |
return (0); |
return (0); |
} |
} |
if( j != cptcovs ){ /* Be careful if a variable is in a product but not single */ |
if( j != cptcovs ){ /* Be careful if a variable is in a product but not single */ |
printf("ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, %s.\n",j, cptcovs, model); |
fprintf(ficlog,"ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, 1+age+%s.\n",j, cptcovs, model);fflush(ficlog); |
fprintf(ficlog,"ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, %s.\n",j, cptcovs, model); |
printf("ERROR: the number of variables in the resultline which is %d, differs from the number %d of single variables used in the model line, 1+age+%s.\n",j, cptcovs, model);fflush(stdout); |
/* return 1;*/ |
if(j==0) |
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return 1; |
} |
} |
for(k=1; k<=j;k++){ /* Loop on any covariate of the RESULT LINE */ |
for(k=1; k<=j;k++){ /* Loop on any covariate of the RESULT LINE */ |
if(nbocc(resultsav,'=') >1){ |
if(nbocc(resultsav,'=') >1){ |
Line 11375 int decodemodel( char model[], int lasto
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Line 11421 int decodemodel( char model[], int lasto
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if (strlen(modelsav) >1){ /* V2 +V3 +V4 +V6 +V7 +V6*V2 +V7*V2 +V6*V3 +V7*V3 +V6*V4 +V7*V4 +age*V2 +age*V3 +age*V4 +age*V6 +age*V7 +age*V6*V2 +V7*V2 +age*V6*V3 +age*V7*V3 +age*V6*V4 +age*V7*V4 */ |
if (strlen(modelsav) >1){ /* V2 +V3 +V4 +V6 +V7 +V6*V2 +V7*V2 +V6*V3 +V7*V3 +V6*V4 +V7*V4 +age*V2 +age*V3 +age*V4 +age*V6 +age*V7 +age*V6*V2 +V7*V2 +age*V6*V3 +age*V7*V3 +age*V6*V4 +age*V7*V4 */ |
j=nbocc(modelsav,'+'); /**< j=Number of '+' */ |
j=nbocc(modelsav,'+'); /**< j=Number of '+' */ |
j1=nbocc(modelsav,'*'); /**< j1=Number of '*' */ |
j1=nbocc(modelsav,'*'); /**< j1=Number of '*' */ |
cptcovs=j+1-j1; /**< Number of simple covariates V1 +V1*age +V3 +V3*V4 +age*age => V1 + V3 =4+1-3=2 */ |
cptcovs=0; /**< Number of simple covariates V1 +V1*age +V3 +V3*V4 +age*age => V1 + V3 =4+1-3=2 Wrong */ |
cptcovt= j+1; /* Number of total covariates in the model, not including |
cptcovt= j+1; /* Number of total covariates in the model, not including |
* cst, age and age*age |
* cst, age and age*age |
* V1+V1*age+ V3 + V3*V4+age*age=> 3+1=4*/ |
* V1+V1*age+ V3 + V3*V4+age*age=> 3+1=4*/ |
Line 11440 int decodemodel( char model[], int lasto
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Line 11486 int decodemodel( char model[], int lasto
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Tvar[k]=0; Tprod[k]=0; Tposprod[k]=0; |
Tvar[k]=0; Tprod[k]=0; Tposprod[k]=0; |
} |
} |
cptcovage=0; |
cptcovage=0; |
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/* First loop in order to calculate */ |
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/* for age*VN*Vm |
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* Provides, Typevar[k], Tage[cptcovage], existcomb[n][m], FixedV[ncovcolt+k12] |
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* Tprod[k1]=k Tposprod[k]=k1; Tvard[k1][1] =m; |
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*/ |
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/* Needs FixedV[Tvardk[k][1]] */ |
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/* For others: |
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* Sets Typevar[k]; |
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* Tvar[k]=ncovcol+nqv+ntv+nqtv+k11; |
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* Tposprod[k]=k11; |
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* Tprod[k11]=k; |
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* Tvardk[k][1] =m; |
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* Needs FixedV[Tvardk[k][1]] == 0 |
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*/ |
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for(k=1; k<=cptcovt;k++){ /* Loop on total covariates of the model line */ |
for(k=1; k<=cptcovt;k++){ /* Loop on total covariates of the model line */ |
cutl(stra,strb,modelsav,'+'); /* keeps in strb after the first '+' cutl from left to right |
cutl(stra,strb,modelsav,'+'); /* keeps in strb after the first '+' cutl from left to right |
modelsav==V2+V1+V5*age+V4+V3*age strb=V3*age stra=V2+V1V5*age+V4 */ /* <model> "V5+V4+V3+V4*V3+V5*age+V1*age+V1" strb="V5" stra="V4+V3+V4*V3+V5*age+V1*age+V1" */ |
modelsav==V2+V1+V5*age+V4+V3*age strb=V3*age stra=V2+V1V5*age+V4 */ /* <model> "V5+V4+V3+V4*V3+V5*age+V1*age+V1" strb="V5" stra="V4+V3+V4*V3+V5*age+V1*age+V1" */ |
Line 11465 int decodemodel( char model[], int lasto
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Line 11527 int decodemodel( char model[], int lasto
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strcat(strb,stre); |
strcat(strb,stre); |
strcpy(strd,strb); /* in order for strd to not be "age" for next test (will be Vn*Vm */ |
strcpy(strd,strb); /* in order for strd to not be "age" for next test (will be Vn*Vm */ |
} |
} |
printf("DEBUG FIXED k=%d, Tage[k]=%d, Tvar[Tage[k]=%d,FixedV[Tvar[Tage[k]]]=%d\n",k,Tage[k],Tvar[Tage[k]],FixedV[Tvar[Tage[k]]]); |
/* printf("DEBUG FIXED k=%d, Tage[k]=%d, Tvar[Tage[k]=%d,FixedV[Tvar[Tage[k]]]=%d\n",k,Tage[k],Tvar[Tage[k]],FixedV[Tvar[Tage[k]]]); */ |
FixedV[Tvar[Tage[k]]]=0; /* HERY not sure */ |
/* FixedV[Tvar[Tage[k]]]=0; /\* HERY not sure if V7*V4*age Fixed might not exist yet*\/ */ |
}else{ /* strc=Vn*Vm (and strd=age) and should be strb=Vn*Vm but want to keep original strb double product */ |
}else{ /* strc=Vn*Vm (and strd=age) and should be strb=Vn*Vm but want to keep original strb double product */ |
strcpy(stre,strb); /* save full b in stre */ |
strcpy(stre,strb); /* save full b in stre */ |
strcpy(strb,strc); /* save short c in new short b for next block strb=Vn*Vm*/ |
strcpy(strb,strc); /* save short c in new short b for next block strb=Vn*Vm*/ |
Line 11499 int decodemodel( char model[], int lasto
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Line 11561 int decodemodel( char model[], int lasto
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Tvardk[k][1] =m; /* m 1 for V1*/ |
Tvardk[k][1] =m; /* m 1 for V1*/ |
Tvard[k1][2] =n; /* n 4 for V4*/ |
Tvard[k1][2] =n; /* n 4 for V4*/ |
Tvardk[k][2] =n; /* n 4 for V4*/ |
Tvardk[k][2] =n; /* n 4 for V4*/ |
/* Tvar[Tage[cptcovage]]=k1;*/ /* Tvar[6=age*V3*V2]=9 (new fixed covariate) */ |
/* Tvar[Tage[cptcovage]]=k1;*/ /* Tvar[6=age*V3*V2]=9 (new fixed covariate) */ /* We don't know about Fixed yet HERE */ |
if( FixedV[Tvardk[k][1]] == 0 && FixedV[Tvardk[k][2]] == 0){ /* If the product is a fixed covariate then we feed the new column with Vn*Vm */ |
if( FixedV[Tvardk[k][1]] == 0 && FixedV[Tvardk[k][2]] == 0){ /* If the product is a fixed covariate then we feed the new column with Vn*Vm */ |
for (i=1; i<=lastobs;i++){/* For fixed product */ |
for (i=1; i<=lastobs;i++){/* For fixed product */ |
/* Computes the new covariate which is a product of |
/* Computes the new covariate which is a product of |
Line 11649 int decodemodel( char model[], int lasto
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Line 11711 int decodemodel( char model[], int lasto
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/*printf("a=%s b=%s sav=%s\n", stra,strb,modelsav); |
/*printf("a=%s b=%s sav=%s\n", stra,strb,modelsav); |
scanf("%d",i);*/ |
scanf("%d",i);*/ |
} /* end of loop + on total covariates */ |
} /* end of loop + on total covariates */ |
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} /* end if strlen(modelsave == 0) age*age might exist */ |
} /* end if strlen(modelsave == 0) age*age might exist */ |
} /* end if strlen(model == 0) */ |
} /* end if strlen(model == 0) */ |
cptcovs=cptcovt - cptcovdageprod - cptcovprod;/**< Number of simple covariates V1 +V1*age +V3 +V3*V4 +age*age + age*v4*V3=> V1 + V3 =4+1-3=2 */ |
cptcovs=cptcovt - cptcovdageprod - cptcovprod;/**< Number of simple covariates V1 +V1*age +V3 +V3*V4 +age*age + age*v4*V3=> V1 + V3 =4+1-3=2 */ |
Line 11687 Fixed[k] 0=fixed (product or simple), 1
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Line 11751 Fixed[k] 0=fixed (product or simple), 1
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Dummy[k] 0=dummy (0 1), 1 quantitative (single or product without age), 2 dummy with age product, 3 quant with age product\n",model); |
Dummy[k] 0=dummy (0 1), 1 quantitative (single or product without age), 2 dummy with age product, 3 quant with age product\n",model); |
for(k=-1;k<=NCOVMAX; k++){ Fixed[k]=0; Dummy[k]=0;} |
for(k=-1;k<=NCOVMAX; k++){ Fixed[k]=0; Dummy[k]=0;} |
for(k=1;k<=NCOVMAX; k++){TvarFind[k]=0; TvarVind[k]=0;} |
for(k=1;k<=NCOVMAX; k++){TvarFind[k]=0; TvarVind[k]=0;} |
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/* Second loop for calculating Fixed[k], Dummy[k]*/ |
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for(k=1, ncovf=0, nsd=0, nsq=0, ncovv=0,ncovva=0,ncovvta=0, ncova=0, ncoveff=0, nqfveff=0, ntveff=0, nqtveff=0, ncovvt=0;k<=cptcovt; k++){ /* or cptocvt loop on k from model */ |
for(k=1, ncovf=0, nsd=0, nsq=0, ncovv=0,ncovva=0,ncovvta=0, ncova=0, ncoveff=0, nqfveff=0, ntveff=0, nqtveff=0, ncovvt=0;k<=cptcovt; k++){ /* or cptocvt loop on k from model */ |
if (Tvar[k] <=ncovcol && Typevar[k]==0 ){ /* Simple fixed dummy (<=ncovcol) covariates */ |
if (Tvar[k] <=ncovcol && Typevar[k]==0 ){ /* Simple fixed dummy (<=ncovcol) covariates */ |
Fixed[k]= 0; |
Fixed[k]= 0; |
Line 12940 int main(int argc, char *argv[])
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Line 13009 int main(int argc, char *argv[])
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/* double ***mobaverage; */ |
/* double ***mobaverage; */ |
double wald; |
double wald; |
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char line[MAXLINE]; |
char line[MAXLINE], linetmp[MAXLINE]; |
char path[MAXLINE],pathc[MAXLINE],pathcd[MAXLINE],pathtot[MAXLINE]; |
char path[MAXLINE],pathc[MAXLINE],pathcd[MAXLINE],pathtot[MAXLINE]; |
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char modeltemp[MAXLINE]; |
char modeltemp[MAXLINE]; |
Line 13273 int main(int argc, char *argv[])
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Line 13342 int main(int argc, char *argv[])
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}else |
}else |
break; |
break; |
} |
} |
if((num_filled=sscanf(line,"model=1+age%[^.\n]", model)) !=EOF){ |
if((num_filled=sscanf(line,"model=%[^.\n]", model)) !=EOF){ /* Every character after model but dot and return */ |
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if (num_filled != 1){ |
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printf("ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
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fprintf(ficlog,"ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
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model[0]='\0'; |
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goto end; |
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}else{ |
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trimbtab(linetmp,line); /* Trims multiple blanks in line */ |
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strcpy(line, linetmp); |
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} |
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} |
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if((num_filled=sscanf(line,"model=1+age%[^.\n]", model)) !=EOF){ /* Every character after 1+age but dot and return */ |
if (num_filled != 1){ |
if (num_filled != 1){ |
printf("ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
printf("ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
fprintf(ficlog,"ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
fprintf(ficlog,"ERROR %d: Model should be at minimum 'model=1+age+' instead of '%s'\n",num_filled, line); |
Line 13646 Please run with mle=-1 to get a correct
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Line 13726 Please run with mle=-1 to get a correct
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Tvard=imatrix(1,NCOVMAX,1,2); /* n=Tvard[k1][1] and m=Tvard[k1][2] gives the couple n,m of the k1 th product Vn*Vm |
Tvard=imatrix(1,NCOVMAX,1,2); /* n=Tvard[k1][1] and m=Tvard[k1][2] gives the couple n,m of the k1 th product Vn*Vm |
* For V3*V2 (in V2+V1+V1*V4+age*V3+V3*V2), V3*V2 position is 2nd. |
* For V3*V2 (in V2+V1+V1*V4+age*V3+V3*V2), V3*V2 position is 2nd. |
* Tvard[k1=2][1]=3 (V3) Tvard[k1=2][2]=2(V2) */ |
* Tvard[k1=2][1]=3 (V3) Tvard[k1=2][2]=2(V2) */ |
Tvardk=imatrix(-1,NCOVMAX,1,2); |
Tvardk=imatrix(0,NCOVMAX,1,2); |
Tage=ivector(1,NCOVMAX); /* Gives the covariate id of covariates associated with age: V2 + V1 + age*V4 + V3*age |
Tage=ivector(1,NCOVMAX); /* Gives the covariate id of covariates associated with age: V2 + V1 + age*V4 + V3*age |
4 covariates (3 plus signs) |
4 covariates (3 plus signs) |
Tage[1=V3*age]= 4; Tage[2=age*V4] = 3 |
Tage[1=V3*age]= 4; Tage[2=age*V4] = 3 |
Line 14901 Please run with mle=-1 to get a correct
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Line 14981 Please run with mle=-1 to get a correct
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|
pstamp(ficreseij); |
pstamp(ficreseij); |
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i1=pow(2,cptcoveff); /* Number of combination of dummy covariates */ |
/* i1=pow(2,cptcoveff); /\* Number of combination of dummy covariates *\/ */ |
if (cptcovn < 1){i1=1;} |
/* if (cptcovn < 1){i1=1;} */ |
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|
for(nres=1; nres <= nresult; nres++) /* For each resultline */ |
for(nres=1; nres <= nresult; nres++){ /* For each resultline */ |
for(k=1; k<=i1;k++){ /* For any combination of dummy covariates, fixed and varying */ |
/* for(k=1; k<=i1;k++){ /\* For any combination of dummy covariates, fixed and varying *\/ */ |
if(i1 != 1 && TKresult[nres]!= k) |
/* if(i1 != 1 && TKresult[nres]!= k) */ |
continue; |
/* continue; */ |
fprintf(ficreseij,"\n#****** "); |
fprintf(ficreseij,"\n#****** "); |
printf("\n#****** "); |
printf("\n#****** "); |
for(j=1;j<=cptcoveff;j++) { |
for(j=1;j<=cptcovs;j++){ |
fprintf(ficreseij,"V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); |
/* for(j=1;j<=cptcoveff;j++) { */ |
printf("V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); |
/* fprintf(ficreseij,"V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); */ |
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fprintf(ficreseij," V%d=%lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
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printf(" V%d=%lg ",Tvresult[nres][j],TinvDoQresult[nres][Tvresult[nres][j]]); |
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/* printf("V%d=%d ",Tvaraff[j],nbcode[Tvaraff[j]][codtabm(k,TnsdVar[Tvaraff[j]])]); */ |
} |
} |
for (j=1; j<= nsq; j++){ /* For each selected (single) quantitative value */ |
for (j=1; j<= nsq; j++){ /* For each selected (single) quantitative value */ |
printf(" V%d=%lg ",TvarsQ[j], TinvDoQresult[nres][TvarsQ[j]]); /* TvarsQ[j] gives the name of the jth quantitative (fixed or time v) */ |
printf(" V%d=%lg ",TvarsQ[j], TinvDoQresult[nres][TvarsQ[j]]); /* TvarsQ[j] gives the name of the jth quantitative (fixed or time v) */ |
Line 15156 Please run with mle=-1 to get a correct
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Line 15239 Please run with mle=-1 to get a correct
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free_vector(weight,firstobs,lastobs); |
free_vector(weight,firstobs,lastobs); |
free_imatrix(Tvardk,-1,NCOVMAX,1,2); |
free_imatrix(Tvardk,0,NCOVMAX,1,2); |
free_imatrix(Tvard,1,NCOVMAX,1,2); |
free_imatrix(Tvard,1,NCOVMAX,1,2); |
free_imatrix(s,1,maxwav+1,firstobs,lastobs); |
free_imatrix(s,1,maxwav+1,firstobs,lastobs); |
free_matrix(anint,1,maxwav,firstobs,lastobs); |
free_matrix(anint,1,maxwav,firstobs,lastobs); |