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version 1.11, 2002/03/11 22:52:27
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version 1.12, 2002/03/13 17:27:44
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Line 37 color="#00006A">INED</font></a><font col
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Line 37 color="#00006A">INED</font></a><font col
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| href="http://euroreves.ined.fr"><font color="#00006A">EUROREVES</font></a></h3>
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href="http://euroreves.ined.fr"><font color="#00006A">EUROREVES</font></a></h3>
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| <p align="center"><font color="#00006A" size="4"><strong>Version
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<p align="center"><font color="#00006A" size="4"><strong>Version
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| 0.71a, March 2002</strong></font></p>
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0.8, March 2002</strong></font></p>
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| <hr size="3" color="#EC5E5E">
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<hr size="3" color="#EC5E5E">
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Line 279 weights or covariates, you must fill the
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Line 279 weights or covariates, you must fill the
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| <h2><font color="#00006A">Your first example parameter file</font><a
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<h2><font color="#00006A">Your first example parameter file</font><a
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| href="http://euroreves.ined.fr/imach"></a><a name="uio"></a></h2>
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href="http://euroreves.ined.fr/imach"></a><a name="uio"></a></h2>
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| <h2><a name="biaspar"></a>#Imach version 0.71a, March 2002,
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<h2><a name="biaspar"></a>#Imach version 0.8, March 2002,
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| INED-EUROREVES </h2>
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INED-EUROREVES </h2>
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| <p>This is a comment. Comments start with a '#'.</p>
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<p>This is a comment. Comments start with a '#'.</p>
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Line 311 INED-EUROREVES </h2>
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Line 311 INED-EUROREVES </h2>
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| <h4><a name="biaspar-2"><font color="#FF0000">Second uncommented
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<h4><a name="biaspar-2"><font color="#FF0000">Second uncommented
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| line</font></a></h4>
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line</font></a></h4>
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| <pre>ftol=1.e-08 stepm=1 ncov=2 nlstate=2 ndeath=1 maxwav=4 mle=1 weight=0</pre>
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<pre>ftol=1.e-08 stepm=1 ncovcol=2 nlstate=2 ndeath=1 maxwav=4 mle=1 weight=0</pre>
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| <ul>
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<ul>
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| <li><b>ftol=1e-8</b> Convergence tolerance on the function
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<li><b>ftol=1e-8</b> Convergence tolerance on the function
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Line 327 line</font></a></h4>
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Line 327 line</font></a></h4>
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| <li>... </li>
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<li>... </li>
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| </ul>
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</ul>
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| </li>
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</li>
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| <li><b>ncov=2</b> Number of covariates in the datafile. </li>
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<li><b>ncovcol=2</b> Number of covariate columns in the datafile
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which precede the date of birth. Here you can put variables that
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won't necessary be used during the run. It is not the number of
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covariates that will be specified by the model. The 'model'
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syntax describe the covariates to take into account. </li>
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| <li><b>nlstate=2</b> Number of non-absorbing (alive) states.
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<li><b>nlstate=2</b> Number of non-absorbing (alive) states.
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| Here we have two alive states: disability-free is coded 1
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Here we have two alive states: disability-free is coded 1
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| and disability is coded 2. </li>
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and disability is coded 2. </li>
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Line 374 Additional covariates can be included wi
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Line 378 Additional covariates can be included wi
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| </ul>
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</ul>
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| <p>In this example, we have two covariates in the data file
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<p>In this example, we have two covariates in the data file
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| (fields 2 and 3). The number of covariates is defined with
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(fields 2 and 3). The number of covariates included in the data file
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| statement ncov=2. If now you have 3 covariates in the datafile
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between the id and the date of birth is ncovcol=2 (it was named ncov
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| (fields 2, 3 and 4), you have to set ncov=3. Then you can run the
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in version prior to 0.8). If you have 3 covariates in the datafile
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(fields 2, 3 and 4), you will set ncovcol=3. Then you can run the
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| programme with a new parametrisation taking into account the
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programme with a new parametrisation taking into account the
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| third covariate. For example, <strong>model=V1+V3 </strong>estimates
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third covariate. For example, <strong>model=V1+V3 </strong>estimates
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| a model with the first and third covariates. More complicated
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a model with the first and third covariates. More complicated
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Line 394 optimization. The number of parameters,
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Line 399 optimization. The number of parameters,
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| number of absorbing states and non-absorbing states and on the
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number of absorbing states and non-absorbing states and on the
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| number of covariates. <br>
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number of covariates. <br>
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| <em>N</em> is given by the formula <em>N</em>=(<em>nlstate</em> +
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<em>N</em> is given by the formula <em>N</em>=(<em>nlstate</em> +
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| <em>ndeath</em>-1)*<em>nlstate</em>*<em>ncov</em> . <br>
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<em>ndeath</em>-1)*<em>nlstate</em>*<em>ncovmodel</em> . <br>
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| <br>
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<br>
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| Thus in the simple case with 2 covariates (the model is log
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Thus in the simple case with 2 covariates (the model is log
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| (pij/pii) = aij + bij * age where intercept and age are the two
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(pij/pii) = aij + bij * age where intercept and age are the two
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Line 1061 question:'<strong>Enter the parameter fi
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Line 1066 question:'<strong>Enter the parameter fi
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| <table border="1">
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<table border="1">
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| <tr>
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<tr>
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| <td width="100%"><strong>IMACH, Version 0.71</strong><p><strong>Enter
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<td width="100%"><strong>IMACH, Version 0.8</strong><p><strong>Enter
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| the parameter file name: ..\mytry\imachpar.imach</strong></p>
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the parameter file name: ..\mytry\imachpar.imach</strong></p>
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| </td>
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</td>
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| </tr>
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</tr>
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Line 1080 href="imachrun.LOG">this Log file</a>
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Line 1085 href="imachrun.LOG">this Log file</a>
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| #
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#
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| title=MLE datafile=..\data\mydata.txt lastobs=3000 firstpass=1 lastpass=3
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title=MLE datafile=..\data\mydata.txt lastobs=3000 firstpass=1 lastpass=3
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| ftol=1.000000e-008 stepm=24 ncov=2 nlstate=2 ndeath=1 maxwav=4 mle=1 weight=0</pre>
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ftol=1.000000e-008 stepm=24 ncovcol=2 nlstate=2 ndeath=1 maxwav=4 mle=1 weight=0</pre>
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| </li>
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</li>
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| <li><pre>Total number of individuals= 2965, Agemin = 70.00, Agemax= 100.92
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<li><pre>Total number of individuals= 2965, Agemin = 70.00, Agemax= 100.92
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Line 1227 simple justification (name, email, insti
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Line 1232 simple justification (name, email, insti
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| href="mailto:brouard@ined.fr">mailto:brouard@ined.fr</a> and <a
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href="mailto:brouard@ined.fr">mailto:brouard@ined.fr</a> and <a
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| href="mailto:lievre@ined.fr">mailto:lievre@ined.fr</a> .</p>
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href="mailto:lievre@ined.fr">mailto:lievre@ined.fr</a> .</p>
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| <p>Latest version (0.71d of March 2002) can be accessed at <a
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<p>Latest version (0.8 of March 2002) can be accessed at <a
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| href="http://euroreves.ined.fr/imach">http://euroreves.ined.fr/imach</a><br>
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href="http://euroreves.ined.fr/imach">http://euroreves.ined.fr/imach</a><br>
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| </p>
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</p>
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| </body>
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</body>
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