version 1.41.2.2, 2003/06/13 07:45:28
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version 1.42, 2002/05/21 18:44:41
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Line 56
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Line 56
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#include <unistd.h>
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#include <unistd.h>
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#define MAXLINE 256
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#define MAXLINE 256
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#define GNUPLOTPROGRAM "wgnuplot"
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#define GNUPLOTPROGRAM "gnuplot"
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/*#define GNUPLOTPROGRAM "..\\gp37mgw\\wgnuplot"*/
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/*#define GNUPLOTPROGRAM "..\\gp37mgw\\wgnuplot"*/
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#define FILENAMELENGTH 80
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#define FILENAMELENGTH 80
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/*#define DEBUG*/
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/*#define DEBUG*/
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#define windows
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/*#define windows*/
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#define GLOCK_ERROR_NOPATH -1 /* empty path */
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#define GLOCK_ERROR_NOPATH -1 /* empty path */
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#define GLOCK_ERROR_GETCWD -2 /* cannot get cwd */
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#define GLOCK_ERROR_GETCWD -2 /* cannot get cwd */
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Line 870 double func( double *x)
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Line 869 double func( double *x)
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double **out;
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double **out;
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double sw; /* Sum of weights */
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double sw; /* Sum of weights */
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double lli; /* Individual log likelihood */
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double lli; /* Individual log likelihood */
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int s1, s2;
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long ipmx;
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long ipmx;
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/*extern weight */
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/*extern weight */
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/* We are differentiating ll according to initial status */
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/* We are differentiating ll according to initial status */
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Line 885 double func( double *x)
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Line 883 double func( double *x)
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for (k=1; k<=cptcovn;k++) cov[2+k]=covar[Tvar[k]][i];
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for (k=1; k<=cptcovn;k++) cov[2+k]=covar[Tvar[k]][i];
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for(mi=1; mi<= wav[i]-1; mi++){
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for(mi=1; mi<= wav[i]-1; mi++){
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for (ii=1;ii<=nlstate+ndeath;ii++)
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for (ii=1;ii<=nlstate+ndeath;ii++)
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for (j=1;j<=nlstate+ndeath;j++){
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for (j=1;j<=nlstate+ndeath;j++) oldm[ii][j]=(ii==j ? 1.0 : 0.0);
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oldm[ii][j]=(ii==j ? 1.0 : 0.0);
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savm[ii][j]=(ii==j ? 1.0 : 0.0);
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}
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for(d=0; d<dh[mi][i]; d++){
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for(d=0; d<dh[mi][i]; d++){
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newm=savm;
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newm=savm;
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cov[2]=agev[mw[mi][i]][i]+d*stepm/YEARM;
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cov[2]=agev[mw[mi][i]][i]+d*stepm/YEARM;
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Line 904 double func( double *x)
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Line 899 double func( double *x)
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} /* end mult */
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} /* end mult */
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s1=s[mw[mi][i]][i];
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lli=log(out[s[mw[mi][i]][i]][s[mw[mi+1][i]][i]]);
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s2=s[mw[mi+1][i]][i];
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/* printf(" %f ",out[s[mw[mi][i]][i]][s[mw[mi+1][i]][i]]);*/
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if( s2 > nlstate){
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/* i.e. if s2 is a death state and if the date of death is known then the contribution
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to the likelihood is the probability to die between last step unit time and current
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step unit time, which is also the differences between probability to die before dh
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and probability to die before dh-stepm .
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In version up to 0.92 likelihood was computed
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as if date of death was unknown. Death was treated as any other
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health state: the date of the interview describes the actual state
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and not the date of a change in health state. The former idea was
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to consider that at each interview the state was recorded
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(healthy, disable or death) and IMaCh was corrected; but when we
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introduced the exact date of death then we should have modified
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the contribution of an exact death to the likelihood. This new
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contribution is smaller and very dependent of the step unit
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stepm. It is no more the probability to die between last interview
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and month of death but the probability to survive from last
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interview up to one month before death multiplied by the
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probability to die within a month. Thanks to Chris
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Jackson for correcting this bug. Former versions increased
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mortality artificially. The bad side is that we add another loop
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which slows down the processing. The difference can be up to 10%
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lower mortality.
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*/
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lli=log(out[s1][s2] - savm[s1][s2]);
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}else{
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lli=log(out[s1][s2]); /* or lli=log(out[s[mw[mi][i]][i]][s[mw[mi+1][i]][i]]); */
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/* printf(" %f ",out[s[mw[mi][i]][i]][s[mw[mi+1][i]][i]]);*/
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}
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ipmx +=1;
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ipmx +=1;
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sw += weight[i];
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sw += weight[i];
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ll[s[mw[mi][i]][i]] += 2*weight[i]*lli;
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ll[s[mw[mi][i]][i]] += 2*weight[i]*lli;
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/*printf("i=%6d s1=%1d s2=%1d mi=%1d mw=%1d lli=%10.6f w=%6.4f out=%10.6f sav=%10.6f\n",i,s1,s2,mi,mw[mi][i],lli,weight[i],out[s1][s2],savm[s1][s2]);*/
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} /* end of wave */
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} /* end of wave */
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} /* end of individual */
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} /* end of individual */
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for(k=1,l=0.; k<=nlstate; k++) l += ll[k];
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for(k=1,l=0.; k<=nlstate; k++) l += ll[k];
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/* printf("l1=%f l2=%f ",ll[1],ll[2]); */
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/* printf("l1=%f l2=%f ",ll[1],ll[2]); */
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l= l*ipmx/sw; /* To get the same order of magnitude as if weight=1 for every body */
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l= l*ipmx/sw; /* To get the same order of magnitude as if weight=1 for every body */
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/*exit(0);*/
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return -l;
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return -l;
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}
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}
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Line 1365 void prevalence(int agemin, float agemax
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Line 1330 void prevalence(int agemin, float agemax
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j=cptcoveff;
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j=cptcoveff;
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if (cptcovn<1) {j=1;ncodemax[1]=1;}
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if (cptcovn<1) {j=1;ncodemax[1]=1;}
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for(k1=1; k1<=j;k1++){
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for(k1=1; k1<=j;k1++){
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for(i1=1; i1<=ncodemax[k1];i1++){
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for(i1=1; i1<=ncodemax[k1];i1++){
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j1++;
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j1++;
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for (i=-1; i<=nlstate+ndeath; i++)
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for (i=-1; i<=nlstate+ndeath; i++)
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for (jk=-1; jk<=nlstate+ndeath; jk++)
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for (jk=-1; jk<=nlstate+ndeath; jk++)
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for(m=agemin; m <= agemax+3; m++)
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for(m=agemin; m <= agemax+3; m++)
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Line 1387 void prevalence(int agemin, float agemax
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Line 1352 void prevalence(int agemin, float agemax
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if ((k2>=dateprev1) && (k2<=dateprev2)) {
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if ((k2>=dateprev1) && (k2<=dateprev2)) {
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if(agev[m][i]==0) agev[m][i]=agemax+1;
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if(agev[m][i]==0) agev[m][i]=agemax+1;
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if(agev[m][i]==1) agev[m][i]=agemax+2;
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if(agev[m][i]==1) agev[m][i]=agemax+2;
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if (m<lastpass)
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if (m<lastpass) {
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if (calagedate>0) freq[s[m][i]][s[m+1][i]][(int)(agev[m][i]+1-((int)calagedate %12)/12.)] += weight[i];
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if (calagedate>0)
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else
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freq[s[m][i]][s[m+1][i]][(int)(agev[m][i]+1-((int)calagedate %12)/12.)] += weight[i];
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freq[s[m][i]][s[m+1][i]][(int)agev[m][i]] += weight[i];
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else
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freq[s[m][i]][s[m+1][i]][(int)(agemax+3)] += weight[i];
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freq[s[m][i]][s[m+1][i]][(int)agev[m][i]] += weight[i];
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freq[s[m][i]][s[m+1][i]][(int)(agemax+3)] += weight[i];
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}
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}
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}
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}
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}
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}
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}
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}
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}
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for(i=(int)agemin; i <= (int)agemax+3; i++){
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for(i=(int)agemin; i <= (int)agemax+3; i++){
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for(jk=1; jk <=nlstate ; jk++){
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for(jk=1; jk <=nlstate ; jk++){
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for(m=-1, pp[jk]=0; m <=nlstate+ndeath ; m++)
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for(m=-1, pp[jk]=0; m <=nlstate+ndeath ; m++)
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pp[jk] += freq[jk][m][i];
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pp[jk] += freq[jk][m][i];
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}
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}
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for(jk=1; jk <=nlstate ; jk++){
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for(jk=1; jk <=nlstate ; jk++){
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for(m=-1, pos=0; m <=0 ; m++)
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for(m=-1, pos=0; m <=0 ; m++)
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pos += freq[jk][m][i];
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pos += freq[jk][m][i];
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}
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}
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for(jk=1; jk <=nlstate ; jk++){
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for(jk=1; jk <=nlstate ; jk++){
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for(m=0, pp[jk]=0; m <=nlstate+ndeath; m++)
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for(m=0, pp[jk]=0; m <=nlstate+ndeath; m++)
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pp[jk] += freq[jk][m][i];
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pp[jk] += freq[jk][m][i];
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}
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}
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for(jk=1,pos=0; jk <=nlstate ; jk++) pos += pp[jk];
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for(jk=1,pos=0; jk <=nlstate ; jk++) pos += pp[jk];
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for(jk=1; jk <=nlstate ; jk++){
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for(jk=1; jk <=nlstate ; jk++){
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if( i <= (int) agemax){
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if( i <= (int) agemax){
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if(pos>=1.e-5){
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if(pos>=1.e-5){
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probs[i][jk][j1]= pp[jk]/pos;
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probs[i][jk][j1]= pp[jk]/pos;
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}
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}
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}
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}
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}
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}
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}
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}
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}
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}
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}
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}
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Line 1698 void evsij(char fileres[], double ***eij
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Line 1665 void evsij(char fileres[], double ***eij
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for(j=1;j<=nlstate*2;j++)
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for(j=1;j<=nlstate*2;j++)
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varhe[i][j][(int)age] =0.;
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varhe[i][j][(int)age] =0.;
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printf("%d||",(int)age);fflush(stdout);
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for(h=0;h<=nhstepm-1;h++){
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for(h=0;h<=nhstepm-1;h++){
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for(k=0;k<=nhstepm-1;k++){
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for(k=0;k<=nhstepm-1;k++){
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matprod2(dnewm,trgradg[h],1,nlstate*2,1,npar,1,npar,matcov);
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matprod2(dnewm,trgradg[h],1,nlstate*2,1,npar,1,npar,matcov);
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Line 2149 fprintf(fichtm," <li>Graphs</li><p>");
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Line 2117 fprintf(fichtm," <li>Graphs</li><p>");
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fprintf(fichtm," V%d=%d ",Tvaraff[cpt],nbcode[Tvaraff[cpt]][codtab[jj1][cpt]]);
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fprintf(fichtm," V%d=%d ",Tvaraff[cpt],nbcode[Tvaraff[cpt]][codtab[jj1][cpt]]);
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fprintf(fichtm," ************\n<hr size=\"2\" color=\"#EC5E5E\">");
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fprintf(fichtm," ************\n<hr size=\"2\" color=\"#EC5E5E\">");
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}
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}
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fprintf(fichtm,"<br>- Probabilities: pe%s%d.gif<br>
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fprintf(fichtm,"<br>- Probabilities: pe%s%d.png<br>
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<img src=\"pe%s%d.gif\">",strtok(optionfile, "."),jj1,strtok(optionfile, "."),jj1);
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<img src=\"pe%s%d.png\">",strtok(optionfile, "."),jj1,strtok(optionfile, "."),jj1);
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for(cpt=1; cpt<nlstate;cpt++){
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for(cpt=1; cpt<nlstate;cpt++){
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fprintf(fichtm,"<br>- Prevalence of disability : p%s%d%d.gif<br>
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fprintf(fichtm,"<br>- Prevalence of disability : p%s%d%d.png<br>
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<img src=\"p%s%d%d.gif\">",strtok(optionfile, "."),cpt,jj1,strtok(optionfile, "."),cpt,jj1);
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<img src=\"p%s%d%d.png\">",strtok(optionfile, "."),cpt,jj1,strtok(optionfile, "."),cpt,jj1);
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}
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}
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for(cpt=1; cpt<=nlstate;cpt++) {
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for(cpt=1; cpt<=nlstate;cpt++) {
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fprintf(fichtm,"<br>- Observed and stationary prevalence (with confident
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fprintf(fichtm,"<br>- Observed and stationary prevalence (with confident
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interval) in state (%d): v%s%d%d.gif <br>
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interval) in state (%d): v%s%d%d.png <br>
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<img src=\"v%s%d%d.gif\">",cpt,strtok(optionfile, "."),cpt,jj1,strtok(optionfile, "."),cpt,jj1);
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<img src=\"v%s%d%d.png\">",cpt,strtok(optionfile, "."),cpt,jj1,strtok(optionfile, "."),cpt,jj1);
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}
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}
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for(cpt=1; cpt<=nlstate;cpt++) {
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for(cpt=1; cpt<=nlstate;cpt++) {
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fprintf(fichtm,"\n<br>- Health life expectancies by age and initial health state (%d): exp%s%d%d.gif <br>
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fprintf(fichtm,"\n<br>- Health life expectancies by age and initial health state (%d): exp%s%d%d.png <br>
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<img src=\"exp%s%d%d.gif\">",cpt,strtok(optionfile, "."),cpt,jj1,strtok(optionfile, "."),cpt,jj1);
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<img src=\"exp%s%d%d.png\">",cpt,strtok(optionfile, "."),cpt,jj1,strtok(optionfile, "."),cpt,jj1);
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}
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}
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fprintf(fichtm,"\n<br>- Total life expectancy by age and
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fprintf(fichtm,"\n<br>- Total life expectancy by age and
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health expectancies in states (1) and (2): e%s%d.gif<br>
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health expectancies in states (1) and (2): e%s%d.png<br>
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<img src=\"e%s%d.gif\">",strtok(optionfile, "."),jj1,strtok(optionfile, "."),jj1);
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<img src=\"e%s%d.png\">",strtok(optionfile, "."),jj1,strtok(optionfile, "."),jj1);
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fprintf(fichtm,"\n</body>");
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fprintf(fichtm,"\n</body>");
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}
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}
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}
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}
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Line 2193 m=pow(2,cptcoveff);
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Line 2161 m=pow(2,cptcoveff);
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for (cpt=1; cpt<= nlstate ; cpt ++) {
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for (cpt=1; cpt<= nlstate ; cpt ++) {
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for (k1=1; k1<= m ; k1 ++) {
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for (k1=1; k1<= m ; k1 ++) {
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fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter gif small size 400,300\nplot [%.f:%.f] \"vpl%s\" every :::%d::%d u 1:2 \"\%%lf",ageminpar,fage,fileres,k1-1,k1-1);
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#ifdef windows
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fprintf(ficgp,"\nset out \"v%s%d%d.png\" \n\n",strtok(optionfile, "."),cpt,k1);
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fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter png small\nset size 0.65,0.65\nplot [%.f:%.f] \"vpl%s\" every :::%d::%d u 1:2 \"\%%lf",ageminpar,fage,fileres,k1-1,k1-1);
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#endif
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#ifdef unix
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fprintf(ficgp,"\nset out \"v%s%d%d.png\" \n\n",strtok(optionfile, "."),cpt,k1);
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fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nplot [%.f:%.f] \"vpl%s\" u 1:2 \"\%%lf",ageminpar,fage,fileres);
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#endif
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for (i=1; i<= nlstate ; i ++) {
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for (i=1; i<= nlstate ; i ++) {
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if (i==cpt) fprintf(ficgp," \%%lf (\%%lf)");
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if (i==cpt) fprintf(ficgp," \%%lf (\%%lf)");
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Line 2210 for (i=1; i<= nlstate ; i ++) {
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Line 2185 for (i=1; i<= nlstate ; i ++) {
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else fprintf(ficgp," \%%*lf (\%%*lf)");
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else fprintf(ficgp," \%%*lf (\%%*lf)");
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}
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}
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fprintf(ficgp,"\" t\"\" w l 1,\"p%s\" every :::%d::%d u 1:($%d) t\"Observed prevalence \" w l 2",fileres,k1-1,k1-1,2+4*(cpt-1));
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fprintf(ficgp,"\" t\"\" w l 1,\"p%s\" every :::%d::%d u 1:($%d) t\"Observed prevalence \" w l 2",fileres,k1-1,k1-1,2+4*(cpt-1));
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#ifdef unix
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fprintf(ficgp,"\nset out \"v%s%d%d.gif\" \nreplot\n\n",strtok(optionfile, "."),cpt,k1);
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fprintf(ficgp,"\nset ter png small\nset size 0.65,0.65\n");
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#endif
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}
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}
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}
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}
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/*2 eme*/
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/*2 eme*/
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for (k1=1; k1<= m ; k1 ++) {
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for (k1=1; k1<= m ; k1 ++) {
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fprintf(ficgp,"set ylabel \"Years\" \nset ter gif small size 400,300\nplot [%.f:%.f] ",ageminpar,fage);
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fprintf(ficgp,"\nset out \"e%s%d.png\" \n\n",strtok(optionfile, "."),k1);
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fprintf(ficgp,"set ylabel \"Years\" \nset ter png small\nset size 0.65,0.65\nplot [%.f:%.f] ",ageminpar,fage);
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for (i=1; i<= nlstate+1 ; i ++) {
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for (i=1; i<= nlstate+1 ; i ++) {
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k=2*i;
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k=2*i;
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Line 2242 fprintf(ficgp,"\nset out \"v%s%d%d.gif\"
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Line 2219 fprintf(ficgp,"\nset out \"v%s%d%d.gif\"
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if (i== (nlstate+1)) fprintf(ficgp,"\" t\"\" w l 0");
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if (i== (nlstate+1)) fprintf(ficgp,"\" t\"\" w l 0");
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else fprintf(ficgp,"\" t\"\" w l 0,");
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else fprintf(ficgp,"\" t\"\" w l 0,");
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}
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}
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fprintf(ficgp,"\nset out \"e%s%d.gif\" \nreplot\n\n",strtok(optionfile, "."),k1);
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}
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}
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/*3eme*/
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/*3eme*/
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Line 2250 fprintf(ficgp,"\nset out \"v%s%d%d.gif\"
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Line 2226 fprintf(ficgp,"\nset out \"v%s%d%d.gif\"
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for (k1=1; k1<= m ; k1 ++) {
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for (k1=1; k1<= m ; k1 ++) {
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for (cpt=1; cpt<= nlstate ; cpt ++) {
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for (cpt=1; cpt<= nlstate ; cpt ++) {
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k=2+nlstate*(2*cpt-2);
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k=2+nlstate*(2*cpt-2);
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fprintf(ficgp,"set ter gif small size 400,300\nplot [%.f:%.f] \"e%s\" every :::%d::%d u 1:%d t \"e%d1\" w l",ageminpar,fage,fileres,k1-1,k1-1,k,cpt);
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fprintf(ficgp,"\nset out \"exp%s%d%d.png\" \n\n",strtok(optionfile, "."),cpt,k1);
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fprintf(ficgp,"set ter png small\nset size 0.65,0.65\nplot [%.f:%.f] \"e%s\" every :::%d::%d u 1:%d t \"e%d1\" w l",ageminpar,fage,fileres,k1-1,k1-1,k,cpt);
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/*fprintf(ficgp,",\"e%s\" every :::%d::%d u 1:($%d-2*$%d) \"\%%lf ",fileres,k1-1,k1-1,k,k+1);
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/*fprintf(ficgp,",\"e%s\" every :::%d::%d u 1:($%d-2*$%d) \"\%%lf ",fileres,k1-1,k1-1,k,k+1);
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for (i=1; i<= nlstate*2 ; i ++) fprintf(ficgp,"\%%lf (\%%lf) ");
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for (i=1; i<= nlstate*2 ; i ++) fprintf(ficgp,"\%%lf (\%%lf) ");
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fprintf(ficgp,"\" t \"e%d1\" w l",cpt);
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fprintf(ficgp,"\" t \"e%d1\" w l",cpt);
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Line 2263 fprintf(ficgp,"\" t \"e%d1\" w l",cpt);
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Line 2240 fprintf(ficgp,"\" t \"e%d1\" w l",cpt);
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fprintf(ficgp," ,\"e%s\" every :::%d::%d u 1:%d t \"e%d%d\" w l",fileres,k1-1,k1-1,k+2*i,cpt,i+1);
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fprintf(ficgp," ,\"e%s\" every :::%d::%d u 1:%d t \"e%d%d\" w l",fileres,k1-1,k1-1,k+2*i,cpt,i+1);
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}
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}
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fprintf(ficgp,"\nset out \"exp%s%d%d.gif\" \nreplot\n\n",strtok(optionfile, "."),cpt,k1);
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}
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}
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}
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}
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/* CV preval stat */
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/* CV preval stat */
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for (k1=1; k1<= m ; k1 ++) {
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for (k1=1; k1<= m ; k1 ++) {
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for (cpt=1; cpt<nlstate ; cpt ++) {
|
for (cpt=1; cpt<nlstate ; cpt ++) {
|
k=3;
|
k=3;
|
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter gif small size 400,300\nplot [%.f:%.f] \"pij%s\" u ($1==%d ? ($3):1/0):($%d/($%d",ageminpar,agemaxpar,fileres,k1,k+cpt+1,k+1);
|
fprintf(ficgp,"set out \"p%s%d%d.png\" \n\n",strtok(optionfile, "."),cpt,k1);
|
|
fprintf(ficgp,"set xlabel \"Age\" \nset ylabel \"Probability\" \nset ter png small\nset size 0.65,0.65\nplot [%.f:%.f] \"pij%s\" u ($1==%d ? ($3):1/0):($%d/($%d",ageminpar,agemaxpar,fileres,k1,k+cpt+1,k+1);
|
|
|
for (i=1; i< nlstate ; i ++)
|
for (i=1; i< nlstate ; i ++)
|
fprintf(ficgp,"+$%d",k+i+1);
|
fprintf(ficgp,"+$%d",k+i+1);
|
Line 2284 fprintf(ficgp,"\" t \"e%d1\" w l",cpt);
|
Line 2261 fprintf(ficgp,"\" t \"e%d1\" w l",cpt);
|
fprintf(ficgp,"+$%d",l+i+1);
|
fprintf(ficgp,"+$%d",l+i+1);
|
}
|
}
|
fprintf(ficgp,")) t\"prev(%d,%d)\" w l\n",cpt+1,cpt+1);
|
fprintf(ficgp,")) t\"prev(%d,%d)\" w l\n",cpt+1,cpt+1);
|
fprintf(ficgp,"set out \"p%s%d%d.gif\" \nreplot\n\n",strtok(optionfile, "."),cpt,k1);
|
|
}
|
}
|
}
|
}
|
|
|
Line 2300 fprintf(ficgp,"\" t \"e%d1\" w l",cpt);
|
Line 2276 fprintf(ficgp,"\" t \"e%d1\" w l",cpt);
|
}
|
}
|
}
|
}
|
}
|
}
|
}
|
}
|
|
|
for(jk=1; jk <=m; jk++) {
|
for(jk=1; jk <=m; jk++) {
|
fprintf(ficgp,"\nset ter gif small size 400,300\nset log y\nplot [%.f:%.f] ",ageminpar,agemaxpar);
|
fprintf(ficgp,"\nset out \"pe%s%d.png\" \n\n",strtok(optionfile, "."),jk);
|
i=1;
|
fprintf(ficgp,"\nset ter png small\nset size 0.65,0.65\nset log y\nplot [%.f:%.f] ",ageminpar,agemaxpar);
|
for(k2=1; k2<=nlstate; k2++) {
|
i=1;
|
k3=i;
|
for(k2=1; k2<=nlstate; k2++) {
|
for(k=1; k<=(nlstate+ndeath); k++) {
|
k3=i;
|
if (k != k2){
|
for(k=1; k<=(nlstate+ndeath); k++) {
|
fprintf(ficgp," exp(p%d+p%d*x",i,i+1);
|
if (k != k2){
|
ij=1;
|
fprintf(ficgp," exp(p%d+p%d*x",i,i+1);
|
for(j=3; j <=ncovmodel; j++) {
|
ij=1;
|
if(((j-2)==Tage[ij]) &&(ij <=cptcovage)) {
|
for(j=3; j <=ncovmodel; j++) {
|
fprintf(ficgp,"+p%d*%d*x",i+j-1,nbcode[Tvar[j-2]][codtab[jk][Tvar[j-2]]]);
|
if(((j-2)==Tage[ij]) &&(ij <=cptcovage)) {
|
ij++;
|
fprintf(ficgp,"+p%d*%d*x",i+j-1,nbcode[Tvar[j-2]][codtab[jk][Tvar[j-2]]]);
|
}
|
ij++;
|
else
|
}
|
fprintf(ficgp,"+p%d*%d",i+j-1,nbcode[Tvar[j-2]][codtab[jk][j-2]]);
|
else
|
}
|
fprintf(ficgp,"+p%d*%d",i+j-1,nbcode[Tvar[j-2]][codtab[jk][j-2]]);
|
fprintf(ficgp,")/(1");
|
}
|
|
fprintf(ficgp,")/(1");
|
for(k1=1; k1 <=nlstate; k1++){
|
|
fprintf(ficgp,"+exp(p%d+p%d*x",k3+(k1-1)*ncovmodel,k3+(k1-1)*ncovmodel+1);
|
for(k1=1; k1 <=nlstate; k1++){
|
ij=1;
|
fprintf(ficgp,"+exp(p%d+p%d*x",k3+(k1-1)*ncovmodel,k3+(k1-1)*ncovmodel+1);
|
for(j=3; j <=ncovmodel; j++){
|
ij=1;
|
if(((j-2)==Tage[ij]) &&(ij <=cptcovage)) {
|
for(j=3; j <=ncovmodel; j++){
|
fprintf(ficgp,"+p%d*%d*x",k3+(k1-1)*ncovmodel+1+j-2,nbcode[Tvar[j-2]][codtab[jk][Tvar[j-2]]]);
|
if(((j-2)==Tage[ij]) &&(ij <=cptcovage)) {
|
ij++;
|
fprintf(ficgp,"+p%d*%d*x",k3+(k1-1)*ncovmodel+1+j-2,nbcode[Tvar[j-2]][codtab[jk][Tvar[j-2]]]);
|
}
|
ij++;
|
else
|
}
|
fprintf(ficgp,"+p%d*%d",k3+(k1-1)*ncovmodel+1+j-2,nbcode[Tvar[j-2]][codtab[jk][j-2]]);
|
else
|
}
|
fprintf(ficgp,"+p%d*%d",k3+(k1-1)*ncovmodel+1+j-2,nbcode[Tvar[j-2]][codtab[jk][j-2]]);
|
fprintf(ficgp,")");
|
}
|
}
|
fprintf(ficgp,")");
|
fprintf(ficgp,") t \"p%d%d\" ", k2,k);
|
}
|
if ((k+k2)!= (nlstate*2+ndeath)) fprintf(ficgp,",");
|
fprintf(ficgp,") t \"p%d%d\" ", k2,k);
|
i=i+ncovmodel;
|
if ((k+k2)!= (nlstate*2+ndeath)) fprintf(ficgp,",");
|
|
i=i+ncovmodel;
|
|
}
|
}
|
}
|
}
|
}
|
}
|
}
|
fprintf(ficgp,"\nset out \"pe%s%d.gif\" \nreplot\n\n",strtok(optionfile, "."),jk);
|
|
}
|
|
|
|
fclose(ficgp);
|
fclose(ficgp);
|
} /* end gnuplot */
|
} /* end gnuplot */
|
|
|
|
|
Line 2679 int main(int argc, char *argv[])
|
Line 2655 int main(int argc, char *argv[])
|
double dateprev1, dateprev2,jproj1,mproj1,anproj1,jproj2,mproj2,anproj2;
|
double dateprev1, dateprev2,jproj1,mproj1,anproj1,jproj2,mproj2,anproj2;
|
|
|
|
|
char version[80]="Imach version 0.8a1, June 2003, INED-EUROREVES ";
|
char version[80]="Imach version 0.8d, May 2002, INED-EUROREVES ";
|
char *alph[]={"a","a","b","c","d","e"}, str[4];
|
char *alph[]={"a","a","b","c","d","e"}, str[4];
|
|
|
|
|
Line 3554 free_matrix(mint,1,maxwav,1,n);
|
Line 3530 free_matrix(mint,1,maxwav,1,n);
|
|
|
|
|
end:
|
end:
|
|
#ifdef windows
|
/* chdir(pathcd);*/
|
/* chdir(pathcd);*/
|
|
#endif
|
/*system("wgnuplot graph.plt");*/
|
/*system("wgnuplot graph.plt");*/
|
/*system("../gp37mgw/wgnuplot graph.plt");*/
|
/*system("../gp37mgw/wgnuplot graph.plt");*/
|
/*system("cd ../gp37mgw");*/
|
/*system("cd ../gp37mgw");*/
|
Line 3564 free_matrix(mint,1,maxwav,1,n);
|
Line 3542 free_matrix(mint,1,maxwav,1,n);
|
strcat(plotcmd,optionfilegnuplot);
|
strcat(plotcmd,optionfilegnuplot);
|
system(plotcmd);
|
system(plotcmd);
|
|
|
/*#ifdef windows*/
|
#ifdef windows
|
while (z[0] != 'q') {
|
while (z[0] != 'q') {
|
/* chdir(path); */
|
/* chdir(path); */
|
printf("\nType e to edit output files, g to graph again, c to start again, and q for exiting: ");
|
printf("\nType e to edit output files, g to graph again, c to start again, and q for exiting: ");
|
Line 3574 free_matrix(mint,1,maxwav,1,n);
|
Line 3552 free_matrix(mint,1,maxwav,1,n);
|
else if (z[0] == 'g') system(plotcmd);
|
else if (z[0] == 'g') system(plotcmd);
|
else if (z[0] == 'q') exit(0);
|
else if (z[0] == 'q') exit(0);
|
}
|
}
|
/*#endif */
|
#endif
|
}
|
}
|
|
|
|
|