+2022-07-25 Brouard Nicolas <brouard@brouard.name>\r
+\r
+ * imach.c (Module): Error cptcovn instead of nsd in bmij (was\r
+ coredumped, revealed by Feiuno, thank you.\r
+\r
+2022-06-02 Brouard Nicolas <brouard@brouard.name>\r
+\r
+ * imach.c (Module): Adding the Wald tests from the log to the main\r
+ htm for better display of the maximum likelihood estimators.\r
+\r
+2022-05-30 Brouard Nicolas <brouard@brouard.name>\r
+\r
+ * imach.c: With products of covariates (age or dummies or\r
+ quantitatives), estimates of parameters were good but when\r
+ estimating variances the positions of newly created covariates\r
+ were wrongly assigned and results were wrong. Thank to Feinua_Sun!\r
+\r
+2022-05-24 Nicolas Brouard <brouard@ined.fr>\r
+\r
+ * imach.c (Module): Some attempts to find a bug of wrong estimates\r
+ of confidencce intervals with product in the equation modelC\r
+\r
+2022-05-15 Nicolas Brouard <brouard@ined.fr>\r
+\r
+ * imach.c (Module): Some minor improvements\r
+\r
+2022-04-13 Brouard Nicolas <brouard@brouard.name>\r
+\r
+ * imach.c (Module): Adding link to text data files\r
+\r
+2022-04-11 Nicolas Brouard <brouard@ined.fr>\r
+\r
+ * imach.c (Module): Error in rewriting the 'r' file with yearsfproj or yearsbproj fixed\r
+\r
+2022-04-05 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c (Module): Fixed covariates (dummy or quantitative)\r
+ with missing values have never been allowed but are ERRORS and\r
+ program quits. Standard deviations of fixed covariates were\r
+ wrongly computed. Mean and standard deviations of time varying\r
+ covariates are still not computed.\r
+\r
+2022-03-17 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * 99r25 Improvements in fixing discrepancies between covariates\r
+ missing in result line but in model. \r
+\r
+*Wed Mar 31 2021 Nicolas Brouard <brouard@ined.fr>\r
+ * imach.c (Module): Still bugs in the result loop. Thank to Holly Benett\r
+\r
+*2021-03-08 Nicolas Brouard <brouard@ined.fr>\r
+\r
+ * ./ (Module): Fixed bug on result:\r
+\r
+*2021-02-20 Nicolas Brouard <brouard@ined.fr>\r
+\r
+ * imach.c (Module): Fix bug on quitting after result lines!\r
+ (Module): Version 0.99r21\r
+\r
+2021-02-12 Nicolas Brouard <brouard@ined.fr>\r
+\r
+ * imach.c (Module): The use of a Windows BOM (huge) file is now an error\r
+\r
+\r
+2021-02-11 Nicolas Brouard <brouard@ined.fr>\r
+\r
+ * (Module): imach.c Someone entered 'results:' instead of 'result:'. Now it is an error which is printed.\r
+\r
+2020-02-22 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * (Module): imach.c Update mle=-3 (for computing Life expectancy\r
+ and life table from the data without any state)\r
+\r
+2019-05-20 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * version.h: Summary: version 0.99.r19\r
+\r
+ * imach.c: Summary: Projection syntax simplified\r
+ We can now start projections, forward or backward, from the mean date\r
+ of inteviews up to or down to a number of years of projection:\r
+ prevforecast=1 yearsfproj=15.3 mobil_average=0\r
+ or\r
+ prevforecast=1 starting-proj-date=1/1/2007 final-proj-date=12/31/2017 mobil_average=0\r
+ or\r
+ prevbackcast=1 yearsbproj=12.3 mobil_average=1\r
+ or\r
+ prevbackcast=1 starting-back-date=1/10/1999 final-back-date=1/1/1985 mobil_average=1\r
+\r
+2019-05-18 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: doxygen tex bug\r
+\r
+2019-05-16 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: There was some wrong lines added\r
+\r
+2019-05-09 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * Makefile, imach.c: *** empty log message ***\r
+\r
+ * ChangeLog: Summary: C=\r
+\r
+ * imach.c: Summary: Some updates\r
+\r
+ * imach.c: Summary: Before ncovmax\r
+\r
+ * version.h: *** empty log message ***\r
+\r
+ * imach.c: Summary: 0.99r18 unlimited number of individuals\r
+ The number n which was limited to 20,000 cases is now unlimited, from firstobs to lastobs. If the number is too for the virtual memory, probably an error will occur.\r
+\r
+2018-12-13 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Bug for young ages (<-30) will be in r17\r
+\r
+2018-12-05 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * Makefile: Summary: 0.99r16\r
+\r
+2018-05-02 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Some bugs fixed\r
+\r
+2018-05-02 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Bug for young ages (<-30) will be in r17\r
+\r
+2018-05-02 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Some bugs fixed\r
+\r
+2018-05-01 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c:\r
+ Summary: Bug fixed by providing frequencies only for non missing covariates\r
+\r
+2018-04-27 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: some minor bugs\r
+\r
+2018-04-21 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * README.txt: *** empty log message ***\r
+\r
+ * imach.c: Summary: Some bugs fixed, valgrind tested\r
+\r
+2018-04-20 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * Makefile, README.txt, setup.iss: Summary: imach 0.99r16\r
+\r
+ * imach.c:\r
+ Summary: Computing mean and stdeviation of fixed quantitative variables\r
+\r
+2018-04-19 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Some minor bugs fixed\r
+\r
+ * version.h: *** empty log message ***\r
+\r
+2018-02-27 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: *** empty log message ***\r
+\r
+ * imach.c: Summary: Adding second argument for quitting\r
+\r
+2018-02-21 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * Makefile, README.txt, imach.c: Summary: 0.99r15\r
+ New Makefile with recent VirtualBox 5.26. Bug in sqrt negatve in imach.c\r
+\r
+2017-07-20 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: temporary working\r
+\r
+2017-07-19 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Bug for mobil_average=0 and prevforecast fixed(?)\r
+\r
+2017-07-17 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: BOM files can be read now\r
+\r
+2017-06-30 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Graphs improvements\r
+\r
+ * imach.c: Summary: Saito's color\r
+\r
+2017-06-29 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Version 0.99r14\r
+\r
+2017-06-27 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: More documentation on projections\r
+\r
+ * imach.c: Summary: Color of backprojection changed from 6 to 5(yellow)\r
+\r
+ * imach.c: Summary: Some bug with rint\r
+\r
+2017-05-24 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: *** empty log message ***\r
+\r
+2017-05-23 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Code into subroutine, cleanings\r
+\r
+2017-05-18 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c:\r
+ Summary: backprojection and confidence intervals of backprevalence\r
+\r
+2017-05-13 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: temporary save for backprojection\r
+\r
+ * imach.c: Summary: Version 0.99r13 (improvements and bugs fixed)\r
+\r
+2017-04-26 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: imach 0.99r13 Some bugs fixed\r
+\r
+ * imach.c: Summary: Labels in graphs\r
+\r
+2017-04-24 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: to save\r
+\r
+2017-04-18 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: *** empty log message ***\r
+\r
+2017-04-05 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Bug in E_ as well as in T_ fixed nres-1 vs k1-1\r
+\r
+2017-04-04 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Gnuplot indexations fixed (humm)\r
+\r
+ * imach.c:\r
+ Summary: Some errors to warnings only if date of death is unknown but status is death we could set to pi3\r
+\r
+2017-04-03 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Version 0.99r12\r
+ Some cleanings, conformed with updated documentation.\r
+\r
+2017-03-30 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * version.h: *** empty log message ***\r
+\r
+ * version.h: Summary:0.99r11\r
+\r
+2017-03-29 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Temp\r
+\r
+2017-03-27 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Temporary\r
+\r
+2017-03-08 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: IMaCh version 0.99r10 bugs in gnuplot fixed\r
+\r
+ * imach.c: Summary: Fixing data parameter line\r
+\r
+2016-12-15 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: 0.99 in progress\r
+\r
+2016-09-15 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: *** empty log message ***\r
+\r
+ * imach.c: Summary: not working\r
+\r
+2016-09-08 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: continue\r
+\r
+2016-09-07 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Starting values from frequencies\r
+\r
+ * imach.c: *** empty log message ***\r
+\r
+2016-09-02 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: *** empty log message ***\r
+\r
+2016-08-30 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Fixing a lots\r
+\r
+2016-08-29 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: gnuplot problem in Back projection to fix\r
+\r
+ * imach.c: Summary: Better\r
+\r
+2016-08-26 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c:\r
+ Summary: Improvement in Powell output in order to copy and paste\r
+\r
+ * imach.c: Summary: Starting tests of 0.99\r
+\r
+ * imach.c: Summary: to valgrind\r
+\r
+2016-08-25 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: *** empty log message ***\r
+\r
+2016-08-23 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: *** empty log message ***\r
+\r
+ * imach.c: Summary: not working\r
+\r
+2016-08-22 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: not working\r
+\r
+ * imach.c: Summary: Not working\r
+\r
+2016-07-23 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Completing for func too\r
+\r
+2016-07-22 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Fixing some arrays, still debugging\r
+\r
+2016-07-21 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c:\r
+ Summary: 0.99 working (more or less) for Asian Workshop on multitate methods\r
+\r
+2016-07-12 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: temp\r
+\r
+ * imach.c: Summary: saving but not running\r
+\r
+2016-07-01 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Fixes\r
+\r
+2016-02-19 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach-0.98r.c: Summary: Kind of 0.98r? series, starting with r7\r
+\r
+ * setup.iss, Makefile, version.h: *** empty log message ***\r
+\r
+ * imach.c: Summary: temporary\r
+\r
+2016-02-17 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Probably last 0.98 stable version 0.98r6\r
+\r
+2016-02-16 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: minor bug\r
+\r
+ * imach.c: Summary: 0.99r2\r
+\r
+2016-02-15 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: *** empty log message ***\r
+\r
+2016-02-12 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: 0.99 Back projections\r
+\r
+2015-12-23 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Experimental backcast\r
+\r
+2015-12-18 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: 0.98r4 Warning and status=-2\r
+\r
+ Version 0.98r4 is now:\r
+ - displaying an error when status is -1, date of interview unknown and date of death known;\r
+ - permitting a status -2 when the vital status is unknown at a known date of right truncation.\r
+ Older changes concerning s=-2, dating from 2005 have been supersed.\r
+\r
+ * Makefile: *** empty log message ***\r
+\r
+2015-12-16 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * Makefile: *** empty log message ***\r
+\r
+ * imach.c: Summary: 0.98r4 working\r
+\r
+ * Makefile: Summary: linuxrpm added\r
+\r
+ * Makefile: *** empty log message ***\r
+\r
+ * imach.c: Summary: temporary not working\r
+\r
+2015-12-11 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: 0.98r4\r
+\r
+2015-12-08 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * Makefile: *** empty log message ***\r
+\r
+2015-11-21 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * Makefile:\r
+ Summary: VBoxManage change from execute --image to run --exe and --wait-exit doesn't exist any more\r
+\r
+ * imach.c: Summary: minor typo\r
+\r
+ * imach.c: Summary: 0.98r3 with some graph of projected cross-sectional\r
+\r
+ Author: Nicolas Brouard\r
+\r
+2015-11-18 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Start working on projected prevalences\r
+\r
+2015-11-17 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Adding ftolpl parameter\r
+ Author: N Brouard\r
+\r
+ We had difficulties to get smoothed confidence intervals. It was due\r
+ to the period prevalence which wasn't computed accurately. The inner\r
+ parameter ftolpl is now an outer parameter of the .imach parameter\r
+ file after estepm. If ftolpl is small 1.e-4 and estepm too,\r
+ computation are long.\r
+\r
+ * version.h: *** empty log message ***\r
+\r
+ * imach.c: Summary: temporary\r
+\r
+2015-10-27 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * Makefile: *** empty log message ***\r
+\r
+ * setup.iss.in: Summary: some new subdirs\r
+\r
+ * imach.c: *** empty log message ***\r
+\r
+ * setup.iss.in:\r
+ Summary: Adding gnuplot 5.1 with bin and etc for pango fonts\r
+\r
+2015-10-24 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: *** empty log message ***\r
+\r
+2015-10-23 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c:\r
+ Summary: 0.98r3 some clarification for graphs on likelihood contributions\r
+\r
+2015-10-01 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c: Summary: Some new graphs of contribution to likelihood\r
+\r
+2015-09-30 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * Makefile:\r
+ Summary: Version read from version.h, itself read with cmake\r
+\r
+ * imach.c: Summary: looking at better estimation of the hessian\r
+\r
+ Also a better criteria for convergence to the period prevalence And\r
+ therefore adding the number of years needed to converge. (The\r
+ prevalence in any alive state shold sum to one\r
+\r
+ * Makefile: *** empty log message ***\r
+\r
+2015-09-22 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * imach.c:\r
+ Summary: Adding some overall graph on contribution to likelihood. Might change\r
+\r
+2015-09-15 Brouard Nicolas <brouard@ined.fr>\r
+\r
+ * Makefile: *** empty log message ***\r
+\r
+ * imach.c: Summary: 0.98r0\r
+\r
+ - Some new graphs like survival functions\r
+ - Some bugs fixed like model=1+age+V2.\r
+\r
+ * ChangeLog, Makefile: Summary: 0.98r0\r
+\r
+ * CMakeLists.txt: Summary: Some tests for setup.iss\r
+\r
+2015-09-15 Nicolas J Brouard <nbrouard@tugault.ined.fr>\r
+\r
+ * (Module): 0.98r0 Some new graphs, some bugs fixed: model=1+age+V2. etc\r
+\r
+2015-08-18 Nicolas J Brouard <nbrouard@tugault.local>\r
+\r
+ * (Module): Adding error when the covariance matrix doesn't contain the exact number of lines required by the model line.\r
+\r
+2015-08-03 Nicolas J Brouard <nbrouard@tugault.ined.fr>\r
+\r
+ * (Module): Changing Variance of one-step probabilities into Standard deviation (thanks to Yao-Chi Shih)\r
+\r
+2014-12-16 Nicolas J Brouard <nbrouard@tugault.local>\r
+\r
+ * imach.c (Module): Merging 1.61 to 1.162\r
+\r
+2014-09-02 Nicolas J Brouard <nbrouard@njbrouard.ined.fr>\r
+\r
+ * prevlim.h (Module): \r
+\r
+2014-01-26 Nicolas J Brouard <nbrouard@ledermann-2.local>\r
+\r
+ * imach.c (Module): Trying to merge old staffs together while being at Tokyo. Not tested...\r
+ (Module): Version 0.98nR Running ok, but output format still only works for three covariates.\r
+\r
+2010-04-29 brouard <brouard@ined.fr>\r
+\r
+ * imach.c (Module): Checking covariates for more complex models\r
+ than V1+V2. A lot of change to be done. Unstable.\r
+\r
+2010-04-26 brouard <brouard@ined.fr>\r
+\r
+ * imach.c (Module): merging some libgsl code. Fixing computation\r
+ of likelione (using inter/intrapolation if mle = 0) in order to\r
+ get same likelihood as if mle=1.\r
+ Some cleaning of code and comments added.\r
+\r
+2009-10-29 brouard <brouard@ined.fr>\r
+\r
+ * imach.c (Module): Now imach stops if date of birth, at least year of birth, is not given. Some cleaning of the code.\r
+\r
+2006-06-30 Brouard Nicolas <brouard@localhost>\r
+\r
+ * imach.c (Module): Clarifications on computing e.j\r
+\r
+2006-04-28 Brouard Nicolas <brouard@localhost>\r
+\r
+ * imach.c (Module): Yes the sum of survivors was wrong since\r
+ imach-114 because nhstepm was no more computed in the age\r
+ loop. Now we define nhstepma in the age loop.\r
+ (Module): In order to speed up (in case of numerous covariates) we\r
+ compute health expectancies (without variances) in a first step\r
+ and then all the health expectancies with variances or standard\r
+ deviation (needs data from the Hessian matrices) which slows the\r
+ computation.\r
+ In the future we should be able to stop the program is only health\r
+ expectancies and graph are needed without standard deviations.\r
+\r
+2006-04-04 LIEVRE Agnes <lievre@PC_00697.ined.fr>\r
+\r
+ * imach.iss (Module): \r
+\r
+ * imach.c (Module): bugs in evsi + population file added in htm output file\r
+\r
+2006-03-22 LIEVRE Agnes <lievre@PC_00697.ined.fr>\r
+\r
+ * imach.c (Module): \r
+\r
+2006-03-20 Brouard Nicolas <brouard@localhost>\r
+\r
+ * imach.c (Module): <title> changed, corresponds to .htm file\r
+ name. <head> headers where missing.\r
+\r
+ * Makefile (Module): 0.98g\r
+\r
+ * imach.c (Module): Weights can have a decimal point as for\r
+ English (a comma might work with a correct LC_NUMERIC environment,\r
+ otherwise the weight is truncated).\r
+ Modification of warning when the covariates values are not 0 or\r
+ 1. \r
+ Version 0.98g\r
+\r
+2006-03-16 LIEVRE Agnes <lievre@PC_00697.ined.fr>\r
+\r
+ * imach.c (Module): Comments concerning covariates added\r
+\r
+ * noreg-setup.iss (Module): Version 0.98f\r
+\r
+ * Makefile (Module): Version 0.98f make _windows=1 imachcyg-setup\r
+\r
+ * imach.c (Module): refinements in the computation of lli if\r
+ status=-2 in order to have more reliable computation if stepm is\r
+ not 1 month. Version 0.98f\r
+\r
+2006-03-15 Brouard Nicolas <brouard@localhost>\r
+\r
+ * imach.c (Module): Bug if status = -2, the loglikelihood was\r
+ computed as likelihood omitting the logarithm. Version O.98e\r
+\r
+2006-03-14 Brouard Nicolas <brouard@localhost>\r
+\r
+ * imach.c (Module): varevsij Comments added explaining the second\r
+ table of variances if popbased=1 .\r
+ (Module): Covariances of eij, ekl added, graphs fixed, new html link.\r
+ (Module): Function pstamp added\r
+ (Module): Version 0.98d \r
+\r
+2006-03-06 Brouard Nicolas <brouard@localhost>\r
+\r
+ * imach.c (Module): Variance-covariance wrong links and\r
+ varian-covariance of ej. is needed (Saito).\r
+\r
+2006-02-27 Brouard Nicolas <brouard@localhost>\r
+\r
+ * imach.c (Module): One freematrix added in mlikeli!\r
+\r
+2006-02-26 Brouard Nicolas <brouard@localhost>\r
+\r
+ * imach.c (Module): Some improvements in processing parameter\r
+ filename with strsep.\r
+\r
+2006-02-24 Brouard Nicolas <brouard@localhost>\r
+\r
+ * imach.c (Module): Memory leaks checks with valgrind and:\r
+ datafile was not closed, some imatrix were not freed and on matrix\r
+ allocation too.\r
+\r
+2006-02-09 LIEVRE Agnes <lievre@PC_00697.ined.fr>\r
+\r
+ * strsep.c (Module): Inclusion because not in mingw32!!!\r
+\r
+ * setup.iss.in (Module): IMACHSETUPVERSION added\r
+\r
+ * noreg-setup.iss (Module): added to cvs tree\r
+\r
+ * Makefile (Module): IMACHSETUPVERSION added\r
+\r
+2006-01-30 BROUARD Nicolas <brouard@localhost>\r
+\r
+ * Makefile (Module, Module): Latest Makefile\r
+\r
+ * imach.c (Module): Back to gnuplot.exe instead of wgnuplot.exe\r
+\r
+2006-01-27 BROUARD Nicolas <brouard@localhost>\r
+\r
+ * noreg-setup.iss (Module): ADDED\r
+\r
+2006-01-24 BROUARD Nicolas <brouard@localhost>\r
+\r
+ * imach.c (Module): Comments (lines starting with a #) are allowed in data.\r
+\r
+2005-10-25 Nicolas Brouard <brouard@dhcp171.recherche.ined.fr>\r
+\r
+ * Makefile (Module): Added Imach98.pmsp and howto crete a dmg\r
+\r
+ * createdmg.sh (Module): Creates a dmg disk for MaC OS/X\r
+\r
+2005-09-30 <lievre@PC_00595>\r
+\r
+ * imach.c (Module): sump fixed, loop imx fixed, and simplifications.\r
+ (Module): If the status is missing at the last wave but we know\r
+ that the person is alive, then we can code his/her status as -2\r
+ (instead of missing=-1 in earlier versions) and his/her\r
+ contributions to the likelihood is 1 - Prob of dying from last\r
+ health status (= 1-p13= p11+p12 in the easiest case of somebody in\r
+ the healthy state at last known wave). Version is 0.98 \r
+\r
+2004-05-20 Brouard Nicolas <brouard@localhost>\r
+\r
+ * imach.c (Repository): \r
+ Agnes added a direct estimation of mortality (without the need of\r
+ computing period prevalence and differential mortality). Thus here\r
+ is version 0.97a which has been distributed to some people at\r
+ REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of\r
+ mortality using covariates is not done today. Estimating direct\r
+ mortality is a very different process because it doesn't need\r
+ interpolation because it is easy to get the lx from the force of\r
+ the mortality mux in the simplest case as for a Gompertz (log mux\r
+ = a + b*x . But we have been able to incorporate the new code\r
+ within former imach program (0.96d) without deteriorating too much\r
+ the understanding of the program. \r
+\r
+2003-06-25 <brouard@BROUARD>\r
+\r
+ * imach.c (Module): On windows (cygwin) function asctime_r doesn't\r
+ exist so I changed back to asctime which exists.\r
+ (Module): Version 0.96b\r
+\r
+2003-06-24 <brouard@BROUARD>\r
+\r
+ * imach.c (Module): Some bugs corrected for windows. Also, when\r
+ mle=-1 a template is output in file "or"mypar.txt with the design\r
+ of the covariance matrix to be input.\r
+\r
+2003-06-25 Brouard Nicolas <brouard@homebrou>\r
+\r
+ * imach.c (Repository): Duplicated warning errors corrected.\r
+ (Repository): Elapsed time after each iteration is now output. It\r
+ helps to forecast when convergence will be reached. Elapsed time\r
+ is stamped in powell. We created a new html file for the graphs\r
+ concerning matrix of covariance. It has extension -cov.htm.\r
+\r
+2003-06-23 Brouard Nicolas <brouard@homebrou>\r
+\r
+ * imach.c (Repository): Create a sub-directory where all the secondary files are. Only imach, htm, gp and r(imach) are on the main directory. Correct time and other things.\r
+\r
+2003-06-18 Brouard Nicolas <brouard@homebrou>\r
+\r
+ * imach.c (Repository): Suppress abusive calls to append to file html (solution was to put fichtm as a global variable. Version 0.96\r
+\r
+2003-06-17 Brouard Nicolas <brouard@homebrou>\r
+\r
+\r
+ * imach.c (Repository): Check when date of death was earlier that\r
+ current date of interview. It may happen when the death was just\r
+ prior to the death. In this case, dh was negative and likelihood\r
+ was wrong (infinity). We still send an "Error" but patch by\r
+ assuming that the date of death was just one stepm after the\r
+ interview.\r
+ (Repository): Because some people have very long ID (first column)\r
+ we changed int to long in num[] and we added a new lvector for\r
+ memory allocation. But we also truncated to 8 characters (left\r
+ truncation)\r
+\r
+ (Repository): No more line truncation errors.\r
+\r
+2003-06-14 Brouard Nicolas <brouard@homebrou>\r
+\r
+ * imach.c (Repository): Add of a routine likelione (likelihood\r
+ only once) which prints on a text file\r
+ (ilk) the contributions to the likelihood for each\r
+ individual/wave.\r
+\r
+2003-06-13 Brouard Nicolas <brouard@homebrou>\r
+ * imach.c (Repository): Replace "freqsummary" at a correct\r
+ place. It differs from routine "prevalence" which may be called\r
+ many times. Probs is memory consuming and must be used with\r
+ parcimony.\r
+\r
+2003-06-17 <brouard@BROUARD>\r
+\r
+ * timeval.h (Module): Added included file to make use of\r
+ gettimeofday working on win32 with cygwin.\r
+\r
+2003-05-16 Brouard Nicolas <brouard@brouard>\r
+ * imach.c (Module): Insert of a warning if the delay between two\r
+ waves is negative.\r
+\r
+ * imach.c (Module): \r
+\r
+2003-05-03 <brouard@BROUARD>\r
+\r
+ * imach.c: Some cleaning\r
+\r
+2003-03-28 <brouard@BROUARD>\r
+ * imach.c (Module): In version up to 0.92 likelihood was computed\r
+ as if date of death was unknown. Death was treated as any other\r
+ health state: the date of the interview describes the actual state\r
+ and not the date of a change in health state. The former idea was\r
+ to consider that at each interview the state was recorded\r
+ (healthy, disable or death) and IMaCh was corrected; but when we\r
+ introduced the exact date of death then we should have modified\r
+ the contribution of an exact death to the likelihood. This new\r
+ contribution is smaller and very dependent of the step unit\r
+ stepm. It is no more the probability to die between last interview\r
+ and month of death but the probability to survive from last\r
+ interview up to one month before death multiplied by the\r
+ probability to die within a month. Thanks to Chris\r
+ Jackson for correcting this bug. Former versions increased\r
+ mortality artificially. The bad side is that we add another loop\r
+ which slows down the processing. The difference can be up to 10%\r
+ lower mortality.\r
+\r
+2002-05-30 <brouard@BROUARD>\r
+ * \r
+ * imach.c (Module): Add correlation matrix of one-step\r
+ probabilities and covariance matrix\r
+\r
+\r
+\r
+\r
+\r
+=======
2022-07-23 Nicolas Brouard <brouard@ined.fr>
* r29 W and not sqrt(Wald)
git://henry.ined.fr / .git / commitdiff