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henry.ined.fr Git - .git/log
N. Brouard [Mon, 27 Feb 2006 12:23:03 +0000 (12:23 +0000)]
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N. Brouard [Mon, 27 Feb 2006 12:17:45 +0000 (12:17 +0000)]
(Module): One freematrix added in mlikeli! 0.98c
N. Brouard [Sun, 26 Feb 2006 12:57:58 +0000 (12:57 +0000)]
(Module): Some improvements in processing parameter
filename with strsep.
N. Brouard [Fri, 24 Feb 2006 14:20:24 +0000 (14:20 +0000)]
(Module): Memory leaks checks with valgrind and:
datafile was not closed, some imatrix were not freed and on matrix
allocation too.
Agnès Lièvre [Thu, 9 Feb 2006 20:19:34 +0000 (20:19 +0000)]
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Agnès Lièvre [Thu, 9 Feb 2006 20:19:28 +0000 (20:19 +0000)]
(Module): IMACHSETUPVERSION added
Agnès Lièvre [Thu, 9 Feb 2006 20:10:44 +0000 (20:10 +0000)]
* setup.iss.in (Module): IMACHSETUPVERSION added
* noreg-setup.iss (Module): added to cvs tree
Agnès Lièvre [Thu, 9 Feb 2006 20:10:37 +0000 (20:10 +0000)]
(Module): IMACHSETUPVERSION added
Agnès Lièvre [Thu, 9 Feb 2006 20:10:22 +0000 (20:10 +0000)]
(Module): Inclusion because not in mingw32!!!
Agnès Lièvre [Thu, 9 Feb 2006 15:35:26 +0000 (15:35 +0000)]
(Module): Wiki link added
Agnès Lièvre [Thu, 9 Feb 2006 15:33:11 +0000 (15:33 +0000)]
Too old
Agnès Lièvre [Thu, 9 Feb 2006 15:31:54 +0000 (15:31 +0000)]
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Agnès Lièvre [Thu, 9 Feb 2006 15:21:55 +0000 (15:21 +0000)]
* setup.iss.in (Module): IMACHSETUPVERSION added
* noreg-setup.iss (Module): added to cvs tree
Agnès Lièvre [Thu, 9 Feb 2006 15:20:33 +0000 (15:20 +0000)]
Update to 0.98b
Agnès Lièvre [Thu, 9 Feb 2006 14:30:41 +0000 (14:30 +0000)]
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Agnès Lièvre [Thu, 9 Feb 2006 14:29:39 +0000 (14:29 +0000)]
(Module): IMACHSETUPVERSION added
Agnès Lièvre [Thu, 9 Feb 2006 14:29:07 +0000 (14:29 +0000)]
(Module): added to cvs tree
Agnès Lièvre [Thu, 9 Feb 2006 14:27:24 +0000 (14:27 +0000)]
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Agnès Lièvre [Thu, 9 Feb 2006 14:15:31 +0000 (14:15 +0000)]
(Module): Parameter file for quick test
Agnès Lièvre [Thu, 9 Feb 2006 13:43:13 +0000 (13:43 +0000)]
(Module): Small file added for a quick test
after installation
N. Brouard [Mon, 30 Jan 2006 10:04:09 +0000 (10:04 +0000)]
(Module, Module): Latest Makefile
N. Brouard [Mon, 30 Jan 2006 09:55:58 +0000 (09:55 +0000)]
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N. Brouard [Mon, 30 Jan 2006 09:55:26 +0000 (09:55 +0000)]
(Module): Back to gnuplot.exe instead of wgnuplot.exe
N. Brouard [Fri, 27 Jan 2006 20:19:24 +0000 (20:19 +0000)]
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N. Brouard [Fri, 27 Jan 2006 20:19:13 +0000 (20:19 +0000)]
noreg added
N. Brouard [Fri, 27 Jan 2006 20:18:13 +0000 (20:18 +0000)]
0.98b
N. Brouard [Wed, 25 Jan 2006 20:38:18 +0000 (20:38 +0000)]
(Module): Lots of cleaning and bugs added (Gompertz)
(Module): Comments can be added in data file. Missing date values
can be a simple dot '.'.
N. Brouard [Wed, 25 Jan 2006 00:51:50 +0000 (00:51 +0000)]
(Module): Lots of cleaning and bugs added (Gompertz)
N. Brouard [Tue, 24 Jan 2006 19:37:15 +0000 (19:37 +0000)]
(Module): Comments (lines starting with a #) are allowed in data.
Agnès Lièvre [Thu, 19 Jan 2006 18:05:42 +0000 (18:05 +0000)]
Gnuplot problem appeared...
To be fixed
N. Brouard [Thu, 19 Jan 2006 16:20:37 +0000 (16:20 +0000)]
Test existence of gnuplot in imach path
N. Brouard [Thu, 19 Jan 2006 13:24:36 +0000 (13:24 +0000)]
Some cleaning and links added in html output
Agnès Lièvre [Thu, 5 Jan 2006 20:23:19 +0000 (20:23 +0000)]
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N. Brouard [Tue, 25 Oct 2005 12:30:34 +0000 (12:30 +0000)]
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N. Brouard [Tue, 25 Oct 2005 12:30:27 +0000 (12:30 +0000)]
(Module): Added Imach98.pmsp and howto crete a dmg
N. Brouard [Tue, 25 Oct 2005 12:23:03 +0000 (12:23 +0000)]
(Module): Creates a dmg disk for MaC OS/X
N. Brouard [Tue, 25 Oct 2005 11:53:26 +0000 (11:53 +0000)]
Version 0.98 MacOS/X Panther
N. Brouard [Tue, 25 Oct 2005 11:49:56 +0000 (11:49 +0000)]
version 0.98 Mac OS/X Panther
N. Brouard [Mon, 17 Oct 2005 15:30:26 +0000 (15:30 +0000)]
Makefile for Mac OS/X
Agnès Lièvre [Fri, 30 Sep 2005 18:02:25 +0000 (18:02 +0000)]
unix2dos added
Agnès Lièvre [Fri, 30 Sep 2005 18:02:04 +0000 (18:02 +0000)]
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Agnès Lièvre [Fri, 30 Sep 2005 17:39:58 +0000 (17:39 +0000)]
The files mypar.txt and data1.txt added
Agnès Lièvre [Fri, 30 Sep 2005 17:33:36 +0000 (17:33 +0000)]
make imachcyg and make imachcyg-setup.exe
Agnès Lièvre [Fri, 30 Sep 2005 16:59:31 +0000 (16:59 +0000)]
Small dataset added
Agnès Lièvre [Fri, 30 Sep 2005 16:11:43 +0000 (16:11 +0000)]
(Module): sump fixed, loop imx fixed, and simplifications.
(Module): If the status is missing at the last wave but we know
that the person is alive, then we can code his/her status as -2
(instead of missing=-1 in earlier versions) and his/her
contributions to the likelihood is 1 - Prob of dying from last
health status (= 1-p13= p11+p12 in the easiest case of somebody in
the healthy state at last known wave). Version is 0.98
Agnès Lièvre [Fri, 30 Sep 2005 15:54:49 +0000 (15:54 +0000)]
(Module): sump fixed, loop imx fixed, and simplifications.
Agnès Lièvre [Fri, 30 Sep 2005 15:52:32 +0000 (15:52 +0000)]
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Agnès Lièvre [Wed, 15 Jun 2005 14:29:14 +0000 (14:29 +0000)]
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Agnès Lièvre [Wed, 15 Jun 2005 13:41:00 +0000 (13:41 +0000)]
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Agnès Lièvre [Fri, 10 Jun 2005 08:54:06 +0000 (08:54 +0000)]
Documentation corrected by Carol
N. Brouard [Tue, 17 May 2005 22:13:25 +0000 (22:13 +0000)]
typo
N. Brouard [Wed, 4 May 2005 17:32:58 +0000 (17:32 +0000)]
Set version
N. Brouard [Wed, 4 May 2005 17:30:11 +0000 (17:30 +0000)]
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N. Brouard [Wed, 4 May 2005 17:24:51 +0000 (17:24 +0000)]
Output of make setup.iss using setup.iss.in as a template.
setup.iss can be compile with Inno Setup compiler to get the IMaCh setup.
c:\Program Files\Inno Setup 4\Compile32.exe /cc setup.iss
In fact we cross compile from Linux to get imach.exe
and are using wine under Linux to run Inno Setup :
wine "C:////Program Files////Inno Setup 4////Compil32.exe" /cc setup.iss
N. Brouard [Wed, 4 May 2005 17:21:23 +0000 (17:21 +0000)]
setup.iss.in is a template for imach Inno Setup
Please do make setup.iss to get it.
N. Brouard [Wed, 4 May 2005 17:17:45 +0000 (17:17 +0000)]
Cross compiling from Linux with i586-mingw32-gcc
Using Wine for Inno Setup Compiler (Versin 4.2.2)
M.H. Cazes [Thu, 23 Dec 2004 18:22:03 +0000 (18:22 +0000)]
File data1.txt wasn't included in doc subdirectory!
N. Brouard [Wed, 15 Sep 2004 17:31:30 +0000 (17:31 +0000)]
Add the possibility to read data file including tab characters.
N. Brouard [Wed, 15 Sep 2004 10:38:38 +0000 (10:38 +0000)]
Fix on curr_time
Agnès Lièvre [Mon, 2 Aug 2004 11:58:22 +0000 (11:58 +0000)]
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Agnès Lièvre [Mon, 2 Aug 2004 11:55:08 +0000 (11:55 +0000)]
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Agnès Lièvre [Mon, 2 Aug 2004 11:43:33 +0000 (11:43 +0000)]
(Module): Documentation on pure mortality
(mle=-3) added.
N. Brouard [Mon, 2 Aug 2004 11:34:01 +0000 (11:34 +0000)]
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N. Brouard [Mon, 2 Aug 2004 11:10:18 +0000 (11:10 +0000)]
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N. Brouard [Mon, 2 Aug 2004 10:46:13 +0000 (10:46 +0000)]
Documentation on pure mortality analysus (i.e mle=-3)
N. Brouard [Fri, 23 Jul 2004 16:07:11 +0000 (16:07 +0000)]
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N. Brouard [Fri, 23 Jul 2004 14:37:49 +0000 (14:37 +0000)]
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N. Brouard [Fri, 23 Jul 2004 14:31:46 +0000 (14:31 +0000)]
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N. Brouard [Fri, 23 Jul 2004 14:17:58 +0000 (14:17 +0000)]
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N. Brouard [Fri, 23 Jul 2004 14:11:14 +0000 (14:11 +0000)]
MaC OS/X version added.
N. Brouard [Mon, 12 Jul 2004 18:29:06 +0000 (18:29 +0000)]
Add version for Mac OS X. Just define UNIX in Makefile
N. Brouard [Tue, 22 Jun 2004 15:26:18 +0000 (15:26 +0000)]
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N. Brouard [Tue, 22 Jun 2004 12:32:24 +0000 (12:32 +0000)]
Inno setup for users without privilege to access Windows registries
N. Brouard [Tue, 22 Jun 2004 11:18:20 +0000 (11:18 +0000)]
Adding the noreg setup for users who don't have privileges to modify Windows registries.
N. Brouard [Thu, 17 Jun 2004 17:36:38 +0000 (17:36 +0000)]
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N. Brouard [Thu, 17 Jun 2004 17:36:17 +0000 (17:36 +0000)]
New iss with documentation.
N. Brouard [Wed, 16 Jun 2004 23:49:33 +0000 (23:49 +0000)]
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N. Brouard [Wed, 16 Jun 2004 23:42:25 +0000 (23:42 +0000)]
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N. Brouard [Wed, 16 Jun 2004 23:41:19 +0000 (23:41 +0000)]
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N. Brouard [Wed, 16 Jun 2004 22:45:51 +0000 (22:45 +0000)]
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N. Brouard [Wed, 16 Jun 2004 21:44:30 +0000 (21:44 +0000)]
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N. Brouard [Wed, 16 Jun 2004 21:43:15 +0000 (21:43 +0000)]
* doc/biaspar.htm (Repository): New add
N. Brouard [Wed, 16 Jun 2004 21:35:20 +0000 (21:35 +0000)]
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N. Brouard [Wed, 16 Jun 2004 12:05:30 +0000 (12:05 +0000)]
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N. Brouard [Wed, 16 Jun 2004 12:00:22 +0000 (12:00 +0000)]
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N. Brouard [Sat, 5 Jun 2004 08:59:37 +0000 (08:59 +0000)]
Load gnuplot 4.0
N. Brouard [Sat, 5 Jun 2004 08:57:40 +0000 (08:57 +0000)]
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N. Brouard [Mon, 24 May 2004 18:35:48 +0000 (18:35 +0000)]
Some improvements in the iss file.
N. Brouard [Mon, 24 May 2004 18:32:25 +0000 (18:32 +0000)]
Agnes added a direct estimation of mortality (without the need of
computing period prevalence and differential mortality). Thus here
is version 0.97a which has been distributed to some people at
REVES 16 in Brugge using an Inno setup.exe for PCs. Estimates of
mortality using covariates is not done today. Estimating direct
mortality is a very different process because it doesn't need
interpolation because it is easy to get the lx from the force of
the mortality mux in the simplest case as for a Gompertz (log mux
= a + b*x . But we have been able to incorporate the new code
within former imach program (0.96d) without deteriorating too much
the understanding of the program.
Gnuplot is now installed in the same directory (on Windows) as imach.
Thus the full path of gnuplot is executed in order to access the
current version.
N. Brouard [Sun, 16 May 2004 15:09:13 +0000 (15:09 +0000)]
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N. Brouard [Sun, 16 May 2004 15:05:56 +0000 (15:05 +0000)]
New version 0.97 . First attempt to estimate force of mortality
directly from the data i.e. without the need of knowing the health
state at each age, but using a Gompertz model: log u =a + b*age .
This is the basic analysis of mortality and should be done before any
other analysis, in order to test if the mortality estimated from the
cross-longitudinal survey is different from the mortality estimated
from other sources like vital statistic data.
The same imach parameter file can be used but the option for mle should be -3.
Agn�s, who wrote this part of the code, tried to keep most of the
former routines in order to include the new code within the former code.
The output is very simple: only an estimate of the intercept and of
the slope with 95% confident intervals.
Current limitations:
A) Even if you enter covariates, i.e. with the
model= V1+V2 equation for example, the programm does only estimate a unique global model without covariates.
B) There is no computation of Life Expectancy nor Life Table.
Agnès Lièvre [Fri, 20 Feb 2004 13:25:42 +0000 (13:25 +0000)]
Version 0.96d. Population forecasting command line is (temporarily)
suppressed.
N. Brouard [Fri, 25 Jul 2003 17:53:29 +0000 (17:53 +0000)]
Inno setup for Imach (first version not fully tested)
N. Brouard [Tue, 15 Jul 2003 15:38:55 +0000 (15:38 +0000)]
* imach.c (Repository): Errors in subdirf, 2, 3 while printing tmpout is
rewritten within the same printf. Workaround: many printfs.
N. Brouard [Tue, 8 Jul 2003 07:54:34 +0000 (07:54 +0000)]
* imach.c (Repository):
(Repository): Using imachwizard code to output a more meaningful covariance
matrix (cov(a12,c31) instead of numbers.
N. Brouard [Fri, 27 Jun 2003 13:00:02 +0000 (13:00 +0000)]
Just cleaning
N. Brouard [Wed, 25 Jun 2003 16:43:01 +0000 (16:43 +0000)]
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N. Brouard [Wed, 25 Jun 2003 16:33:55 +0000 (16:33 +0000)]
(Module): On windows (cygwin) function asctime_r doesn't
exist so I changed back to asctime which exists.
(Module): Version 0.96b
N. Brouard [Wed, 25 Jun 2003 16:30:45 +0000 (16:30 +0000)]
(Module): On windows (cygwin) function asctime_r doesn't
exist so I changed back to asctime which exists.
N. Brouard [Wed, 25 Jun 2003 16:19:51 +0000 (16:19 +0000)]
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